Scott E. Lewis, Ph.D. - Publications

Affiliations: 
2006 University of South Florida, Tampa, FL, United States 
Area:
General Chemistry, Sciences Education, Higher Education

30/204 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang Y, Lewis SE. Analytical chemistry students’ explanatory statements in the context of their corresponding lecture Chemistry Education Research and Practice. DOI: 10.1039/D0Rp00063A  0.511
2020 Ralph VR, Lewis SE. Introducing randomization tests via an evaluation of peer-led team learning in undergraduate chemistry courses Chemistry Education Research and Practice. 21: 287-306. DOI: 10.1039/C9Rp00187E  0.484
2020 Ralph VR, Lewis SE. Impact of Representations in Assessments on Student Performance and Equity Journal of Chemical Education. 97: 603-615. DOI: 10.1021/Acs.Jchemed.9B01058  0.492
2020 Lewis SE. Chemistry Assessments through the Sudden Implementation of Online Instruction Journal of Chemical Education. 97: 3418-3422. DOI: 10.1021/Acs.Jchemed.0C00697  0.368
2020 Rahman T, Lewis SE. Evaluating the Evidence Base for Evidence-Based Instructional Practices in Chemistry through Meta-Analysis Journal of Research in Science Teaching. 57: 765-793. DOI: 10.1002/Tea.21610  0.304
2019 Seery MK, Kahveci A, Lawrie GA, Lewis SE. Evaluating articles submitted for publication in Chemistry Education Research and Practice Chemistry Education Research and Practice. 20: 335-339. DOI: 10.1039/C9Rp90003A  0.313
2019 Ralph VR, Lewis SE. An Explanative Basis for the Differential Performance of Students with Low Math Aptitude in General Chemistry. Chemistry Education Research and Practice. 20: 570-593. DOI: 10.1039/C9Rp00068B  0.494
2019 Herrington DG, Sweeder RD, Daubenmire PL, Bauer CF, Bretz SL, Bunce DM, Carmel JH, Cole R, DeKorver BK, Kelly RM, Lewis SE, Oliver-Hoyo M, Ryan SAC, Stains M, Towns MH, et al. Supporting the Growth and Impact of the Chemistry-Education-Research Community Journal of Chemical Education. 96: 393-397. DOI: 10.1021/Acs.Jchemed.8B00823  0.389
2018 Ralph VR, Lewis SE. Chemistry topics posing incommensurate difficulty to students with low math aptitude scores Chemistry Education Research and Practice. 19: 867-884. DOI: 10.1039/C8Rp00115D  0.48
2018 Lewis SE. Goal orientations of general chemistry students via the achievement goal framework Chemistry Education Research and Practice. 19: 199-212. DOI: 10.1039/C7Rp00148G  0.454
2017 Apugliese A, Lewis SE. Impact of instructional decisions on the effectiveness of cooperative learning in chemistry through meta-analysis Chemistry Education Research and Practice. 18: 271-278. DOI: 10.1039/C6Rp00195E  0.376
2016 Ye L, Shuniak C, Oueini R, Robert J, Lewis S. Can they succeed? Exploring at-risk students' study habits in college general chemistry Chemistry Education Research and Practice. 17: 878-892. DOI: 10.1039/C6Rp00101G  0.488
2016 Robert J, Lewis SE, Oueini R, Mapugay A. Coordinated Implementation and Evaluation of Flipped Classes and Peer-Led Team Learning in General Chemistry Journal of Chemical Education. 93: 1993-1998. DOI: 10.1021/Acs.Jchemed.6B00395  0.471
2015 Ye L, Oueini R, Dickerson AP, Lewis SE. Learning beyond the Classroom: Using Text Messages to Measure General Chemistry Students' Study Habits. Chemistry Education Research and Practice. 16: 869-878. DOI: 10.1039/C5Rp00100E  0.518
2015 Ye L, Lewis SE, Raker JR, Oueini R. Examining the Impact of Chemistry Education Research Articles from 2007 through 2013 by Citation Counts Journal of Chemical Education. 92: 1299-1305. DOI: 10.1021/Ed5007635  0.335
2015 Ye L, Oueini R, Lewis SE. Developing and Implementing an Assessment Technique to Measure Linked Concepts Journal of Chemical Education. 92: 1807-1812. DOI: 10.1021/Acs.Jchemed.5B00161  0.501
2014 Ye L, Lewis SE. Looking for links: examining student responses in creative exercises for evidence of linking chemistry concepts Chemistry Education Research and Practice. 15: 576-586. DOI: 10.1039/C4Rp00086B  0.489
2014 Lewis SE. Investigating the Longitudinal Impact of a Successful Reform in General Chemistry on Student Enrollment and Academic Performance Journal of Chemical Education. 91: 2037-2044. DOI: 10.1021/Ed500404Q  0.535
2014 Lewis SE. Examining Evidence for External and Consequential Validity of the First Term General Chemistry Exam from the ACS Examinations Institute Journal of Chemical Education. 91: 793-799. DOI: 10.1021/Ed400819G  0.498
2012 Mitchell YD, Ippolito J, Lewis SE. Evaluating peer-led team learning across the two semester general chemistry sequence Chemistry Education Research and Practice. 13: 378-383. DOI: 10.1039/C2Rp20028G  0.511
2011 Lewis SE, Shaw JL, Freeman KA. Establishing open-ended assessments: Investigating the validity of creative exercises Chemistry Education Research and Practice. 12: 158-166. DOI: 10.1039/C1Rp90020J  0.445
2011 Lewis SE. Retention and Reform: An Evaluation of Peer-Led Team Learning Journal of Chemical Education. 88: 703-707. DOI: 10.1021/Ed100689M  0.452
2009 Lewis SE, Shaw JL, Heitz JO, Webster GH. Altitude counts: Self-concept and success in general chemistry Journal of Chemical Education. 86: 744-749. DOI: 10.1021/Ed086P744  0.43
2009 Shaw JL, Dockery CR, Lewis SE, Harris L, Bettis R. The trans effect: A guided-inquiry experiment for upper-division inorganic chemistry Journal of Chemical Education. 86: 1416-1418. DOI: 10.1021/Ed086P1416  0.458
2008 Rushton GT, Hardy RC, Gwaltney KP, Lewis SE. Alternative conceptions of organic chemistry topics among fourth year chemistry students Chemistry Education Research and Practice. 9: 122-130. DOI: 10.1039/B806228P  0.463
2008 Lewis SE, Lewis JE. Seeking effectiveness and equity in a large college chemistry course: An HLM investigation of peer-led guided inquiry Journal of Research in Science Teaching. 45: 794-811. DOI: 10.1002/Tea.20254  0.584
2007 Lewis SE, Lewis JE. Predicting at-risk students in general chemistry: Comparing formal thought to a general achievement measure Chemistry Education Research and Practice. 8: 32-51. DOI: 10.1039/B6Rp90018F  0.603
2006 Lewis SE, Lewis JE. Effectiveness of a workshop to encourage action: Evaluation from a post-workshop survey Journal of Chemical Education. 83: 299-304. DOI: 10.1021/Ed083P299  0.53
2005 Lewis SE, Lewis JE. The same or not the same: Equivalence as an issue in educational research Journal of Chemical Education. 82: 1408-1412. DOI: 10.1021/Ed082P1408  0.558
2005 Lewis SE, Lewis JE. Departing from lectures: An evaluation of a peer-led guided inquiry alternative Journal of Chemical Education. 82: 135-139. DOI: 10.1021/Ed082P135  0.606
Low-probability matches (unlikely to be authored by this person)
2020 Lawrie GA, Graulich N, Kahveci A, Lewis SE. Steps towards publishing your thesis or dissertation research: avoiding the pitfalls in turning a treasured tome into a highly-focussed article for CERP Chemistry Education Research and Practice. 21: 694-697. DOI: 10.1039/D0Rp90007A  0.265
2011 Lewis S. AP: A critical examination of the Advanced Placement program Science Education. 95: 573-575. DOI: 10.1002/Sce.20453  0.198
2013 Buttigieg PL, Morrison N, Smith B, Mungall CJ, Lewis SE. The environment ontology: contextualising biological and biomedical entities. Journal of Biomedical Semantics. 4: 43. PMID 24330602 DOI: 10.1186/2041-1480-4-43  0.186
2010 Barratt CL, Aitken RJ, Björndahl L, Carrell DT, de Boer P, Kvist U, Lewis SE, Perreault SD, Perry MJ, Ramos L, Robaire B, Ward S, Zini A. Sperm DNA: organization, protection and vulnerability: from basic science to clinical applications--a position report. Human Reproduction (Oxford, England). 25: 824-38. PMID 20139429 DOI: 10.1093/Humrep/Dep465  0.172
2015 Bastian FB, Chibucos MC, Gaudet P, Giglio M, Holliday GL, Huang H, Lewis SE, Niknejad A, Orchard S, Poux S, Skunca N, Robinson-Rechavi M. The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations. Database : the Journal of Biological Databases and Curation. 2015: bav043. PMID 25957950 DOI: 10.1093/Database/Bav043  0.169
2021 Agarwal A, Sharma R, Gupta S, Finelli R, Parekh N, Panner Selvam MK, Henkel R, Durairajanayagam D, Pompeu C, Madani S, Belo A, Singh N, Covarrubias S, Darbandi S, Sadeghi R, ... ... Lewis SE, et al. Sperm Morphology Assessment in the Era of Intracytoplasmic Sperm Injection: Reliable Results Require Focus on Standardization, Quality Control, and Training. The World Journal of Men's Health. PMID 34169687 DOI: 10.5534/wjmh.210054  0.159
2011 Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, ... ... Lewis SE, et al. Towards BioDBcore: a community-defined information specification for biological databases. Database : the Journal of Biological Databases and Curation. 2011: baq027. PMID 21205783 DOI: 10.1093/Database/Baq027  0.149
2011 Gaudet P, Bairoch A, Field D, Sansone SA, Taylor C, Attwood TK, Bateman A, Blake JA, Bult CJ, Cherry JM, Chisholm RL, Cochrane G, Cook CE, Eppig JT, Galperin MY, ... ... Lewis SE, et al. Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Research. 39: D7-10. PMID 21097465 DOI: 10.1093/Nar/Gkq1173  0.149
2011 Kohl SK, Lewis SE, Tunnicliffe J, Lott RL, Spencer LT, Carson FL, Souers RJ, Knapp RH, Movahedi-Lankarani S, Haas TS, Brown RW. The College of American Pathologists and National Society for Histotechnology workload study. Archives of Pathology & Laboratory Medicine. 135: 728-36. PMID 21631265 DOI: 10.1043/2010-0288-CP.1  0.147
2011 Washington NL, Stinson EO, Perry MD, Ruzanov P, Contrino S, Smith R, Zha Z, Lyne R, Carr A, Lloyd P, Kephart E, McKay SJ, Micklem G, Stein LD, Lewis SE. The modENCODE Data Coordination Center: lessons in harvesting comprehensive experimental details. Database : the Journal of Biological Databases and Curation. 2011: bar023. PMID 21856757 DOI: 10.1093/Database/Bar023  0.145
2016 Altenhoff AM, Boeckmann B, Capella-Gutierrez S, Dalquen DA, DeLuca T, Forslund K, Huerta-Cepas J, Linard B, Pereira C, Pryszcz LP, Schreiber F, da Silva AS, Szklarczyk D, Train CM, Bork P, ... ... Lewis SE, et al. Standardized benchmarking in the quest for orthologs. Nature Methods. PMID 27043882 DOI: 10.1038/Nmeth.3830  0.143
2013 Tomlinson M, Lewis S, Morroll D. Sperm quality and its relationship to natural and assisted conception: British Fertility Society guidelines for practice. Human Fertility (Cambridge, England). 16: 175-93. PMID 23862664 DOI: 10.3109/14647273.2013.807522  0.143
2014 Köhler S, Doelken SC, Mungall CJ, Bauer S, Firth HV, Bailleul-Forestier I, Black GC, Brown DL, Brudno M, Campbell J, FitzPatrick DR, Eppig JT, Jackson AP, Freson K, Girdea M, ... ... Lewis SE, et al. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data. Nucleic Acids Research. 42: D966-74. PMID 24217912 DOI: 10.1093/Nar/Gkt1026  0.142
2015 Thessen AE, Bunker DE, Buttigieg PL, Cooper LD, Dahdul WM, Domisch S, Franz NM, Jaiswal P, Lawrence-Dill CJ, Midford PE, Mungall CJ, Ramírez MJ, Specht CD, Vogt L, Vos RA, ... ... Lewis SE, et al. Emerging semantics to link phenotype and environment. Peerj. 3: e1470. PMID 26713234 DOI: 10.7717/Peerj.1470  0.14
2014 Chibucos MC, Mungall CJ, Balakrishnan R, Christie KR, Huntley RP, White O, Blake JA, Lewis SE, Giglio M. Standardized description of scientific evidence using the Evidence Ontology (ECO). Database : the Journal of Biological Databases and Curation. 2014. PMID 25052702 DOI: 10.1093/database/bau075  0.139
2014 Davis AM, Lewis SE, Brodie JE, Benson A. The potential benefits of herbicide regulation: a cautionary note for the Great Barrier Reef catchment area. The Science of the Total Environment. 490: 81-92. PMID 24840283 DOI: 10.1016/j.scitotenv.2014.04.005  0.139
2014 Corpas M, Jimenez R, Carbon SJ, García A, Garcia L, Goldberg T, Gomez J, Kalderimis A, Lewis SE, Mulvany I, Pawlik A, Rowland F, Salazar G, Schreiber F, Sillitoe I, et al. BioJS: an open source standard for biological visualisation - its status in 2014. F1000research. 3: 55. PMID 25075290 DOI: 10.12688/F1000Research.3-55.V1  0.136
2013 Köhler S, Doelken SC, Ruef BJ, Bauer S, Washington N, Westerfield M, Gkoutos G, Schofield P, Smedley D, Lewis SE, Robinson PN, Mungall CJ. Construction and accessibility of a cross-species phenotype ontology along with gene annotations for biomedical research. F1000research. 2: 30. PMID 24358873 DOI: 10.12688/F1000Research.2-30.V2  0.136
2016 Lewis S, Silburn M, Kookana RS, Shaw M. Pesticide behaviour, fate and effects in the tropics: an overview of current state of knowledge. Journal of Agricultural and Food Chemistry. PMID 27160796 DOI: 10.1021/acs.jafc.6b01320  0.136
2013 Blake JA, Dolan M, Drabkin H, Hill DP, Li N, Sitnikov D, Bridges S, Burgess S, Buza T, McCarthy F, Peddinti D, Pillai L, Carbon S, Dietze H, ... ... Lewis SE, et al. Gene Ontology annotations and resources. Nucleic Acids Research. 41: D530-5. PMID 23161678 DOI: 10.1093/nar/gks1050  0.133
2010 Lewis SE, Simon L. Clinical implications of sperm DNA damage. Human Fertility (Cambridge, England). 13: 201-7. PMID 21117929 DOI: 10.3109/14647273.2010.528823  0.127
2007 Lewis SE. Is sperm evaluation useful in predicting human fertility? Reproduction (Cambridge, England). 134: 31-40. PMID 17641086 DOI: 10.1530/REP-07-0152  0.125
2016 Witt KD, Beresford L, Bhattacharya S, Brian K, Coomarasamy A, Hooper R, Kirkman-Brown J, Khalaf Y, Lewis SE, Pacey A, Pavitt S, West R, Miller D. Hyaluronic Acid Binding Sperm Selection for assisted reproduction treatment (HABSelect): Study protocol for a multicentre randomised controlled trial Bmj Open. 6. DOI: 10.1136/bmjopen-2016-012609  0.124
2013 Maynard SM, Mungall CJ, Lewis SE, Imam FT, Martone ME. A knowledge based approach to matching human neurodegenerative disease and animal models. Frontiers in Neuroinformatics. 7: 7. PMID 23717278 DOI: 10.3389/Fninf.2013.00007  0.119
2012 Contrino S, Smith RN, Butano D, Carr A, Hu F, Lyne R, Rutherford K, Kalderimis A, Sullivan J, Carbon S, Kephart ET, Lloyd P, Stinson EO, Washington NL, Perry MD, ... ... Lewis SE, et al. modMine: flexible access to modENCODE data. Nucleic Acids Research. 40: D1082-8. PMID 22080565 DOI: 10.1093/Nar/Gkr921  0.119
2015 Deans AR, Lewis SE, Huala E, Anzaldo SS, Ashburner M, Balhoff JP, Blackburn DC, Blake JA, Burleigh JG, Chanet B, Cooper LD, Courtot M, Csösz S, Cui H, Dahdul W, et al. Finding our way through phenotypes. Plos Biology. 13: e1002033. PMID 25562316 DOI: 10.1371/Journal.Pbio.1002033  0.119
2022 Daly S, Hanson JT, Mavanji V, Gravely A, Jean J, Jonason A, Lewis S, Ashe J, Looft JM, McGovern RA. Using kinematics to re-define the pull test as a quantitative biomarker of the postural response in normal pressure hydrocephalus patients. Experimental Brain Research. PMID 35041069 DOI: 10.1007/s00221-021-06292-5  0.115
2011 Gaudet P, Livstone MS, Lewis SE, Thomas PD. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Briefings in Bioinformatics. 12: 449-62. PMID 21873635 DOI: 10.1093/bib/bbr042  0.114
2015 Mungall CJ, Washington NL, Nguyen-Xuan J, Condit C, Smedley D, Köhler S, Groza T, Shefchek K, Hochheiser H, Robinson PN, Lewis SE, Haendel MA. Use of Model Organism and Disease Databases to Support Matchmaking for Human Disease Gene Discovery. Human Mutation. 36: 979-84. PMID 26269093 DOI: 10.1002/Humu.22857  0.109
2019 Miller D, Pavitt S, Sharma V, Forbes G, Hooper R, Bhattacharya S, Kirkman-Brown J, Coomarasamy A, Lewis S, Cutting R, Brison D, Pacey A, West R, Brian K, Griffin D, et al. Physiological, hyaluronan-selected intracytoplasmic sperm injection for infertility treatment (HABSelect): a parallel, two-group, randomised trial. Lancet (London, England). 393: 416-422. PMID 30712901 DOI: 10.1016/S0140-6736(18)32989-1  0.107
2011 Verdoorn TA, McCarten JR, Arciniegas DB, Golden R, Moldauer L, Georgopoulos A, Lewis S, Cassano M, Hemmy L, Orr W, Rojas DC. Evaluation and tracking of Alzheimer's disease severity using resting-state magnetoencephalography. Journal of Alzheimer's Disease : Jad. 26: 239-55. PMID 21971464 DOI: 10.3233/Jad-2011-0056  0.106
2013 Uosis-Martin M, Panto? GD, Mahon MF, Lewis SE. A model system for the synthesis of complanadine alkaloids by "diverted Kondrat'eva" oxazole-olefin cycloaddition. The Journal of Organic Chemistry. 78: 6253-63. PMID 23713565 DOI: 10.1021/Jo401014N  0.103
2014 Haendel MA, Balhoff JP, Bastian FB, Blackburn DC, Blake JA, Bradford Y, Comte A, Dahdul WM, Dececchi TA, Druzinsky RE, Hayamizu TF, Ibrahim N, Lewis SE, Mabee PM, Niknejad A, et al. Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon. Journal of Biomedical Semantics. 5: 21. PMID 25009735 DOI: 10.1186/2041-1480-5-21  0.101
2012 Mabee P, Deans A, Huala E, Lewis SE. Phenotype Ontology Research Coordination Network meeting report: creating a community network for comparing and leveraging phenotype-genotype knowledge across species. Standards in Genomic Sciences. 6: 440-3. PMID 23409218 DOI: 10.4056/Sigs.2926219  0.1
2014 Robinson PN, Köhler S, Oellrich A, Wang K, Mungall CJ, Lewis SE, Washington N, Bauer S, Seelow D, Krawitz P, Gilissen C, Haendel M, Smedley D. Improved exome prioritization of disease genes through cross-species phenotype comparison. Genome Research. 24: 340-8. PMID 24162188 DOI: 10.1101/Gr.160325.113  0.1
2003 Lewis SE. Importance of mitochondrial and nuclear sperm DNA in sperm quality assessment and assisted reproduction outcome. Human Fertility (Cambridge, England). 5: 102-9. PMID 12193793 DOI: 10.1080/1464727022000199012  0.099
2014 Lewis SE. Applications of biocatalytic arene ipso,ortho cis-dihydroxylation in synthesis. Chemical Communications (Cambridge, England). 50: 2821-30. PMID 24514270 DOI: 10.1039/c3cc49694e  0.096
2013 Lewis SE, John Aitken R, Conner SJ, Iuliis GD, Evenson DP, Henkel R, Giwercman A, Gharagozloo P. The impact of sperm DNA damage in assisted conception and beyond: recent advances in diagnosis and treatment. Reproductive Biomedicine Online. 27: 325-37. PMID 23948450 DOI: 10.1016/J.Rbmo.2013.06.014  0.096
2015 Haendel MA, Vasilevsky N, Brush M, Hochheiser HS, Jacobsen J, Oellrich A, Mungall CJ, Washington N, Köhler S, Lewis SE, Robinson PN, Smedley D. Disease insights through cross-species phenotype comparisons. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 26092691 DOI: 10.1007/S00335-015-9577-8  0.095
2008 Lewis SE, Agbaje IM. Using the alkaline comet assay in prognostic tests for male infertility and assisted reproductive technology outcomes. Mutagenesis. 23: 163-70. PMID 18325925 DOI: 10.1093/mutage/gem052  0.095
2012 Lewis SE, Paro R, Borriello L, Simon L, Robinson L, Dincer Z, Riedel G, Battista N, Maccarrone M. Long-term use of HU210 adversely affects spermatogenesis in rats by modulating the endocannabinoid system. International Journal of Andrology. 35: 731-40. PMID 22435752 DOI: 10.1111/j.1365-2605.2012.01259.x  0.094
2012 Brodie JE, Kroon FJ, Schaffelke B, Wolanski EC, Lewis SE, Devlin MJ, Bohnet IC, Bainbridge ZT, Waterhouse J, Davis AM. Terrestrial pollutant runoff to the Great Barrier Reef: An update of issues, priorities and management responses. Marine Pollution Bulletin. 65: 81-100. PMID 22257553 DOI: 10.1016/j.marpolbul.2011.12.012  0.094
2005 McVicar CM, O'Neill DA, McClure N, Clements B, McCullough S, Lewis SE. Effects of vasectomy on spermatogenesis and fertility outcome after testicular sperm extraction combined with ICSI. Human Reproduction (Oxford, England). 20: 2795-800. PMID 15958397 DOI: 10.1093/humrep/dei138  0.09
2014 Zemojtel T, Köhler S, Mackenroth L, Jäger M, Hecht J, Krawitz P, Graul-Neumann L, Doelken S, Ehmke N, Spielmann M, Oien NC, Schweiger MR, Krüger U, Frommer G, Fischer B, ... ... Lewis SE, et al. Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome. Science Translational Medicine. 6: 252ra123. PMID 25186178 DOI: 10.1126/Scitranslmed.3009262  0.09
2014 Mark Burden A, Lewis SE, Willcox E. The effect of manipulating root mean square window length and overlap on reliability, inter-individual variability, statistical significance and clinical relevance of electromyograms. Manual Therapy. 19: 595-601. PMID 24985956 DOI: 10.1016/j.math.2014.06.003  0.089
2020 Esteves SC, Lombardo F, Garrido N, Alvarez J, Zini A, Colpi GM, Kirkman-Brown J, Lewis SE, Björndahl L, Majzoub A, Cho CL, Vendeira P, Hallak J, Amar E, Cocuzza M, et al. SARS-CoV-2 pandemic and repercussions for male infertility patients: a proposal for the individualized provision of andrological services. Andrology. PMID 32357288 DOI: 10.1111/andr.12809  0.089
2012 Lewis SE, Schaffelke B, Shaw M, Bainbridge ZT, Rohde KW, Kennedy K, Davis AM, Masters BL, Devlin MJ, Mueller JF, Brodie JE. Assessing the additive risks of PSII herbicide exposure to the Great Barrier Reef. Marine Pollution Bulletin. 65: 280-91. PMID 22172236 DOI: 10.1016/j.marpolbul.2011.11.009  0.088
2016 McMurry JA, Köhler S, Washington NL, Balhoff JP, Borromeo C, Brush M, Carbon S, Conlin T, Dunn N, Engelstad M, Foster E, Gourdine JP, Jacobsen JO, Keith D, Laraway B, ... ... Lewis SE, et al. Navigating the Phenotype Frontier: The Monarch Initiative. Genetics. 203: 1491-5. PMID 27516611 DOI: 10.1534/Genetics.116.188870  0.087
2003 Thompson-Cree ME, McClure N, Donnelly ET, Steele KE, Lewis SE. Effects of cryopreservation on testicular sperm nuclear DNA fragmentation and its relationship with assisted conception outcome following ICSI with testicular spermatozoa. Reproductive Biomedicine Online. 7: 449-55. PMID 14656407 DOI: 10.1016/S1472-6483(10)61889-5  0.084
2012 Mungall CJ, Torniai C, Gkoutos GV, Lewis SE, Haendel MA. Uberon, an integrative multi-species anatomy ontology. Genome Biology. 13: R5. PMID 22293552 DOI: 10.1186/gb-2012-13-1-r5  0.083
2014 Lewis SE. Sperm DNA fragmentation and base oxidation. Advances in Experimental Medicine and Biology. 791: 103-16. PMID 23955675 DOI: 10.1007/978-1-4614-7783-9_7  0.08
2012 Thomas PD, Wood V, Mungall CJ, Lewis SE, Blake JA. On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report. Plos Computational Biology. 8: e1002386. PMID 22359495 DOI: 10.1371/journal.pcbi.1002386  0.08
2011 Birnberg JM, Drum ML, Huang ES, Casalino LP, Lewis SE, Vable AM, Tang H, Quinn MT, Burnet DL, Summerfelt T, Chin MH. Development of a safety net medical home scale for clinics. Journal of General Internal Medicine. 26: 1418-25. PMID 21837377 DOI: 10.1007/s11606-011-1767-9  0.079
2013 Sánchez-Pozo MC, Mendiola J, Serrano M, Mozas J, Björndahl L, Menkveld R, Lewis SE, Mortimer D, Jørgensen N, Barratt CL, Fernández MF, Castilla JA. Proposal of guidelines for the appraisal of SEMen QUAlity studies (SEMQUA). Human Reproduction (Oxford, England). 28: 10-21. PMID 23054068 DOI: 10.1093/humrep/des355  0.078
2001 Donnelly ET, Steele EK, McClure N, Lewis SE. Assessment of DNA integrity and morphology of ejaculated spermatozoa from fertile and infertile men before and after cryopreservation. Human Reproduction (Oxford, England). 16: 1191-9. PMID 11387291 DOI: 10.1093/HUMREP/16.6.1191  0.078
2013 Lee E, Helt GA, Reese JT, Munoz-Torres MC, Childers CP, Buels RM, Stein L, Holmes IH, Elsik CG, Lewis SE. Web Apollo: a web-based genomic annotation editing platform. Genome Biology. 14: R93. PMID 24000942 DOI: 10.1186/Gb-2013-14-8-R93  0.078
2009 Lewis SE, Maccarrone M. Endocannabinoids, sperm biology and human fertility. Pharmacological Research. 60: 126-31. PMID 19559363 DOI: 10.1016/j.phrs.2009.02.009  0.078
2012 Palframan MJ, Kociok-Köhn G, Lewis SE. Photooxygenation of a microbial arene oxidation product and regioselective Kornblum-DeLaMare rearrangement: total synthesis of zeylenols and zeylenones. Chemistry (Weinheim An Der Bergstrasse, Germany). 18: 4766-74. PMID 22378592 DOI: 10.1002/chem.201104035  0.077
2012 Ali Khan M, Mahon MF, Lowe JP, Stewart AJ, Lewis SE. Valuable new cyclohexadiene building blocks from cationic η5-iron-carbonyl complexes derived from a microbial arene oxidation product. Chemistry (Weinheim An Der Bergstrasse, Germany). 18: 13480-93. PMID 22976900 DOI: 10.1002/chem.201202411  0.075
2013 Jones CD, Holmes GM, Lewis SE, Thompson KW, Cykert S, DeWalt DA. Satisfaction with electronic health records is associated with job satisfaction among primary care physicians. Informatics in Primary Care. 21: 18-20. PMID 24629652 DOI: 10.14236/Jhi.V21I1.27  0.074
2018 Yap T, Nicopoullos J, Lewis S, Lee K, Larsen P, Ramsay J, Vicéns-Morton A, Minhas S. Novel measures of sperm DNA damage increase its usefulness to diagnose male infertility and predict live births following both IVF and ICSI European Urology Supplements. 17: e1096. DOI: 10.1016/s1569-9056(18)31596-3  0.074
2012 Lewis SE, Whitley R. A critical examination of "morality" in an age of evidence-based psychiatry. Culture, Medicine and Psychiatry. 36: 735-43. PMID 23054298 DOI: 10.1007/s11013-012-9282-y  0.073
2006 Lewis SE, West MC, Fleming R. Sperm and embryo cryopreservation practice in licensed clinics in the UK endorsed by The British Fertility Society. Human Fertility (Cambridge, England). 9: 15-26. PMID 16581718 DOI: 10.1080/14647270500230031  0.073
2013 Lyall CL, Uosis-Martin M, Lowe JP, Mahon MF, Panto? GD, Lewis SE. Aliphatic C-H activation with aluminium trichloride-acetyl chloride: expanding the scope of the Baddeley reaction for the functionalisation of saturated hydrocarbons. Organic & Biomolecular Chemistry. 11: 1468-75. PMID 23263676 DOI: 10.1039/C2Ob26765A  0.073
2021 Sharma R, Gupta S, Agarwal A, Henkel R, Finelli R, Parekh N, Saleh R, Arafa M, Ko E, Zini A, Tadros N, Shah R, Ambar RF, Elbardisi H, Sengupta P, ... ... Lewis SE, et al. Relevance of Leukocytospermia and Semen Culture and Its True Place in Diagnosing and Treating Male Infertility. The World Journal of Men's Health. PMID 34169683 DOI: 10.5534/wjmh.210063  0.072
2000 Donnelly ET, McClure N, Lewis SE. Glutathione and hypotaurine in vitro: effects on human sperm motility, DNA integrity and production of reactive oxygen species. Mutagenesis. 15: 61-8. PMID 10640532 DOI: 10.1093/MUTAGE/15.1.61  0.072
2008 Bennetts LE, De Iuliis GN, Nixon B, Kime M, Zelski K, McVicar CM, Lewis SE, Aitken RJ. Impact of estrogenic compounds on DNA integrity in human spermatozoa: evidence for cross-linking and redox cycling activities. Mutation Research. 641: 1-11. PMID 18342339 DOI: 10.1016/j.mrfmmm.2008.02.002  0.072
2003 Glenn DR, McClure N, Lewis SE. The hidden impact of diabetes on male sexual dysfunction and fertility. Human Fertility (Cambridge, England). 6: 174-9. PMID 14614196 DOI: 10.1080/1464770312331369453  0.071
2011 Lambert RF, Hinkle RJ, Ammann SE, Lian Y, Liu J, Lewis SE, Pike RD. Bi(OTf)3-, TfOH-, and TMSOTf-mediated, one-pot epoxide rearrangement, addition, and intramolecular silyl-modified Sakurai (ISMS) cascade toward dihydropyrans: comparison of catalysts and role of Bi(OTf)3. The Journal of Organic Chemistry. 76: 9269-77. PMID 21916500 DOI: 10.1021/Jo201478D  0.071
2015 Boeckmann B, Marcet-Houben M, Rees JA, Forslund K, Huerta-Cepas J, Muffato M, Yilmaz P, Xenarios I, Bork P, Lewis SE, Gabaldón T. Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream. Genome Biology and Evolution. 7: 1988-99. PMID 26133389 DOI: 10.1093/Gbe/Evv121  0.071
2014 Ghosh A, Davey M, Chute IC, Griffiths SG, Lewis S, Chacko S, Barnett D, Crapoulet N, Fournier S, Joy A, Caissie MC, Ferguson AD, Daigle M, Meli MV, Lewis SM, et al. Rapid isolation of extracellular vesicles from cell culture and biological fluids using a synthetic peptide with specific affinity for heat shock proteins. Plos One. 9: e110443. PMID 25329303 DOI: 10.1371/journal.pone.0110443  0.07
2011 Simon L, Lewis SE. Sperm DNA damage or progressive motility: which one is the better predictor of fertilization in vitro? Systems Biology in Reproductive Medicine. 57: 133-8. PMID 21299480 DOI: 10.3109/19396368.2011.553984  0.07
2012 Lewis SE, Brodie JE, McCulloch MT, Mallela J, Jupiter SD, Williams HS, Lough JM, Matson EG. An assessment of an environmental gradient using coral geochemical records, Whitsunday Islands, Great Barrier Reef, Australia. Marine Pollution Bulletin. 65: 306-19. PMID 22030106 DOI: 10.1016/J.Marpolbul.2011.09.030  0.07
2012 Davis AM, Lewis SE, Bainbridge ZT, Glendenning L, Turner RD, Brodie JE. Dynamics of herbicide transport and partitioning under event flow conditions in the lower Burdekin region, Australia. Marine Pollution Bulletin. 65: 182-93. PMID 21937063 DOI: 10.1016/j.marpolbul.2011.08.025  0.069
2015 Groza T, Köhler S, Moldenhauer D, Vasilevsky N, Baynam G, Zemojtel T, Schriml LM, Kibbe WA, Schofield PN, Beck T, Vasant D, Brookes AJ, Zankl A, Washington NL, Mungall CJ, ... Lewis SE, et al. The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease. American Journal of Human Genetics. 97: 111-24. PMID 26119816 DOI: 10.1016/J.Ajhg.2015.05.020  0.068
2012 Lewis SE, Rapino C, Di Tommaso M, Pucci M, Battista N, Paro R, Simon L, Lutton D, Maccarrone M. Differences in the endocannabinoid system of sperm from fertile and infertile men. Plos One. 7: e47704. PMID 23082196 DOI: 10.1371/journal.pone.0047704  0.067
2014 Bartley R, Bainbridge ZT, Lewis SE, Kroon FJ, Wilkinson SN, Brodie JE, Silburn DM. Relating sediment impacts on coral reefs to watershed sources, processes and management: a review. The Science of the Total Environment. 468: 1138-53. PMID 24121565 DOI: 10.1016/j.scitotenv.2013.09.030  0.066
2013 Simon L, Proutski I, Stevenson M, Jennings D, McManus J, Lutton D, Lewis SE. Sperm DNA damage has a negative association with live-birth rates after IVF. Reproductive Biomedicine Online. 26: 68-78. PMID 23200202 DOI: 10.1016/J.Rbmo.2012.09.019  0.066
2016 Hazell G, Gee AP, Arnold T, Edler KJ, Lewis SE. Langmuir monolayers composed of single and double tail sulfobetaine lipids. Journal of Colloid and Interface Science. 474: 190-198. PMID 27124813 DOI: 10.1016/J.Jcis.2016.04.020  0.065
2019 Vyas L, Lewis S, Tharakan T, Jayasena C, Minhas S, Ramsay J. Evidence that testicular sperm in infertile men has improved DNA integrity compared to ejaculated sperm European Urology Supplements. 18: e323. DOI: 10.1016/S1569-9056(19)30237-4  0.065
2019 Vyas* L, Lewis S, Tharakan T, Jayasena C, Minhas S, Ramsay J. MP75-01 EVIDENCE THAT TESTICULAR SPERM HAS IMPROVED DNA INTEGRITY COMPARED TO EJACULATED SPERM IN INFERTILE MEN Journal of Urology. 201. DOI: 10.1097/01.JU.0000557203.31219.5f  0.065
2015 Lewis SE. Should sperm DNA fragmentation testing be included in the male infertility work-up? Reproductive Biomedicine Online. PMID 26096033 DOI: 10.1016/j.rbmo.2015.05.006  0.065
2013 Quinn MT, Gunter KE, Nocon RS, Lewis SE, Vable AM, Tang H, Park SY, Casalino LP, Huang ES, Birnberg J, Burnet DL, Summerfelt WT, Chin MH. Undergoing transformation to the patient centered medical home in safety net health centers: perspectives from the front lines. Ethnicity & Disease. 23: 356-62. PMID 23914423  0.064
2012 Robinson L, Gallos ID, Conner SJ, Rajkhowa M, Miller D, Lewis S, Kirkman-Brown J, Coomarasamy A. The effect of sperm DNA fragmentation on miscarriage rates: a systematic review and meta-analysis. Human Reproduction (Oxford, England). 27: 2908-17. PMID 22791753 DOI: 10.1093/humrep/des261  0.064
2013 Doelken SC, Köhler S, Mungall CJ, Gkoutos GV, Ruef BJ, Smith C, Smedley D, Bauer S, Klopocki E, Schofield PN, Westerfield M, Robinson PN, Lewis SE. Phenotypic overlap in the contribution of individual genes to CNV pathogenicity revealed by cross-species computational analysis of single-gene mutations in humans, mice and zebrafish. Disease Models & Mechanisms. 6: 358-72. PMID 23104991 DOI: 10.1242/Dmm.010322  0.063
2000 Steele EK, McClure N, Lewis SE. Comparison of the effects of two methods of cryopreservation on testicular sperm DNA. Fertility and Sterility. 74: 450-3. PMID 10973636 DOI: 10.1016/S0015-0282(00)00680-4  0.063
1999 Donnelly ET, McClure N, Lewis SE. The effect of ascorbate and alpha-tocopherol supplementation in vitro on DNA integrity and hydrogen peroxide-induced DNA damage in human spermatozoa. Mutagenesis. 14: 505-12. PMID 10473655 DOI: 10.1093/MUTAGE/14.5.505  0.062
2021 Lewis S, Nash A, Li Q, Ahn TH. Comparison of 16S and whole genome dog microbiomes using machine learning. Biodata Mining. 14: 41. PMID 34419136 DOI: 10.1186/s13040-021-00270-x  0.062
2005 Lewis SE, Aitken RJ. DNA damage to spermatozoa has impacts on fertilization and pregnancy. Cell and Tissue Research. 322: 33-41. PMID 15912407 DOI: 10.1007/s00441-005-1097-5  0.061
2014 Laabei M, Jamieson WD, Lewis SE, Diggle SP, Jenkins AT. A new assay for rhamnolipid detection-important virulence factors of Pseudomonas aeruginosa. Applied Microbiology and Biotechnology. 98: 7199-209. PMID 24974281 DOI: 10.1007/s00253-014-5904-3  0.061
2011 Simon L, Lutton D, McManus J, Lewis SE. Sperm DNA damage measured by the alkaline Comet assay as an independent predictor of male infertility and in vitro fertilization success. Fertility and Sterility. 95: 652-7. PMID 20864101 DOI: 10.1016/j.fertnstert.2010.08.019  0.061
2012 Chen CK, Mungall CJ, Gkoutos GV, Doelken SC, Köhler S, Ruef BJ, Smith C, Westerfield M, Robinson PN, Lewis SE, Schofield PN, Smedley D. MouseFinder: Candidate disease genes from mouse phenotype data. Human Mutation. 33: 858-66. PMID 22331800 DOI: 10.1002/Humu.22051  0.061
2012 Kennedy K, Devlin M, Bentley C, Lee-Chue K, Paxman C, Carter S, Lewis SE, Brodie J, Guy E, Vardy S, Martin KC, Jones A, Packett R, Mueller JF. The influence of a season of extreme wet weather events on exposure of the World Heritage Area Great Barrier Reef to pesticides. Marine Pollution Bulletin. 64: 1495-507. PMID 22738465 DOI: 10.1016/j.marpolbul.2012.05.014  0.059
2012 Lewis S. Wudinna Health Centre - improving access to primary care in a remote community. Australian Family Physician. 41: 907-8. PMID 23145427  0.059
2012 Lewis SE, Hopper K, Healion E. Partners in recovery: social support and accountability in a consumer-run mental health center. Psychiatric Services (Washington, D.C.). 63: 61-5. PMID 22227761 DOI: 10.1176/Appi.Ps.201000512  0.059
1999 Donnelly ET, McClure N, Lewis SE. Antioxidant supplementation in vitro does not improve human sperm motility. Fertility and Sterility. 72: 484-95. PMID 10519621 DOI: 10.1016/S0015-0282(99)00267-8  0.059
2010 Chioccarelli T, Cacciola G, Altucci L, Lewis SE, Simon L, Ricci G, Ledent C, Meccariello R, Fasano S, Pierantoni R, Cobellis G. Cannabinoid receptor 1 influences chromatin remodeling in mouse spermatids by affecting content of transition protein 2 mRNA and histone displacement. Endocrinology. 151: 5017-29. PMID 20810562 DOI: 10.1210/en.2010-0133  0.058
1995 Drudy L, Lewis SE, Barry-Kinsella C, Harrison RF, Thompson W. The influence of peritoneal fluid from patients with minimal stage or treated endometriosis on sperm motility parameters using computer-assisted semen analysis. Human Reproduction (Oxford, England). 9: 2418-23. PMID 7714167 DOI: 10.1093/OXFORDJOURNALS.HUMREP.A138461  0.058
1997 Donnelly G, Lewis S, Kennedy M, Thompson W. P-035. Direct effects of alcohol on sperm motility assessed by CASA Human Reproduction. 12: 137-137. DOI: 10.1093/HUMREP/12.SUPPL_2.137  0.058
2003 O'Connell M, McClure N, Lewis SE. Mitochondrial DNA deletions and nuclear DNA fragmentation in testicular and epididymal human sperm. Human Reproduction (Oxford, England). 17: 1565-70. PMID 12042279 DOI: 10.1093/HUMREP/17.6.1565  0.057
2011 Griffen JA, Le Coz AM, Kociok-Köhn G, Khan MA, Stewart AJ, Lewis SE. Expanding the chiral pool: oxidation of meta-bromobenzoic acid by R. eutrophus B9 allows access to new reaction manifolds. Organic & Biomolecular Chemistry. 9: 3920-8. PMID 21472181 DOI: 10.1039/c1ob05131h  0.056
2014 Lyall CL, Sato M, Uosis-Martin M, Asghar SF, Jones MD, Williams IH, Lewis SE. C-H functionalization of sp(3) centers with aluminum: a computational and mechanistic study of the Baddeley reaction of decalin. Journal of the American Chemical Society. 136: 13745-53. PMID 25196493 DOI: 10.1021/Ja5062246  0.056
2015 Shepherd DL, Nichols CE, Croston TL, M cLaughlin SL, Petrone AB, Lewis SE, Thapa D, Long DM, Dick GM, Hollander JM. Early cardiac dysfunction in the type 1 diabetic heart using speckle-tracking based strain imaging. Journal of Molecular and Cellular Cardiology. PMID 26654913 DOI: 10.1016/J.Yjmcc.2015.12.001  0.056
1999 Anderson L, Lewis S, McClure N. The Effects of Coital Lubricants on Sperm Motility In Vitro Journal of Urology. 162: 627-627. DOI: 10.1016/S0022-5347(05)68650-8  0.055
2016 Yachdav G, Wilzbach S, Rauscher B, Sheridan R, Sillitoe I, Procter J, Lewis S, Rost B, Goldberg T. MSAViewer: interactive JavaScript visualization of multiple sequence alignments. Bioinformatics (Oxford, England). PMID 27412096 DOI: 10.1093/Bioinformatics/Btw474  0.054
2016 Cowper P, Jin Y, Turton MD, Kociok-Köhn G, Lewis SE. Azulenesulfonium Salts: Accessible, Stable, and Versatile Reagents for Cross-Coupling. Angewandte Chemie (International Ed. in English). PMID 26806850 DOI: 10.1002/anie.201510666  0.054
2000 Donnelly ET, O'Connell M, McClure N, Lewis SE. Differences in nuclear DNA fragmentation and mitochondrial integrity of semen and prepared human spermatozoa. Human Reproduction (Oxford, England). 15: 1552-61. PMID 10875865 DOI: 10.1093/HUMREP/15.7.1552  0.053
2001 Steele EK, Ellis PK, Lewis SE, McClure N. Ultrasound, antisperm antibody, and hormone profiles after testicular Trucut biopsy. Fertility and Sterility. 75: 423-8. PMID 11172851 DOI: 10.1016/S0015-0282(00)01700-3  0.052
1997 Hughes C, Lewis S, McKelvey-Martin V, Thompson W. P-037. Effect of antioxidant supplementation in vitro and in vivo on human sperm DNA integrity Human Reproduction. 12: 137-138. DOI: 10.1093/HUMREP/12.SUPPL_2.137-B  0.052
2013 Mallela J, Lewis SE, Croke B. Coral skeletons provide historical evidence of phosphorus runoff on the great barrier reef. Plos One. 8: e75663. PMID 24086606 DOI: 10.1371/Journal.Pone.0075663  0.051
1998 Anderson L, Lewis SE, McClure N. The effects of coital lubricants on sperm motility in vitro. Human Reproduction (Oxford, England). 13: 3351-6. PMID 9886513 DOI: 10.1093/HUMREP/13.12.3351  0.051
2007 Glenn DR, McVicar CM, McClure N, Lewis SE. Sildenafil citrate improves sperm motility but causes a premature acrosome reaction in vitro. Fertility and Sterility. 87: 1064-70. PMID 17335822 DOI: 10.1016/j.fertnstert.2006.11.017  0.05
2014 Lewis SE, Rice A, Hurst GD, Baylis M. First detection of endosymbiotic bacteria in biting midges Culicoides pulicaris and Culicoides punctatus, important Palaearctic vectors of bluetongue virus. Medical and Veterinary Entomology. 28: 453-6. PMID 24612104 DOI: 10.1111/mve.12055  0.05
2016 Liu M, Chen L, Lewis S, Chong SY, Little MA, Hasell T, Aldous IM, Brown CM, Smith MW, Morrison CA, Hardwick LJ, Cooper AI. Three-dimensional protonic conductivity in porous organic cage solids. Nature Communications. 7: 12750. PMID 27619230 DOI: 10.1038/Ncomms12750  0.049
2013 Lewis SE. The place of sperm DNA fragmentation testing in current day fertility management Middle East Fertility Society Journal. 18: 78-82. DOI: 10.1016/J.MEFS.2013.01.010  0.049
2011 Simon L, Castillo J, Oliva R, Lewis SE. Relationships between human sperm protamines, DNA damage and assisted reproduction outcomes. Reproductive Biomedicine Online. 23: 724-34. PMID 22036908 DOI: 10.1016/j.rbmo.2011.08.010  0.049
2015 Doll DN, Engler-Chiurazzi EB, Lewis SE, Hu H, Kerr AE, Ren X, Simpkins JW. Lipopolysaccharide exacerbates infarct size and results in worsened post-stroke behavioral outcomes. Behavioral and Brain Functions : Bbf. 11: 32. PMID 26463864 DOI: 10.1186/S12993-015-0077-5  0.047
1999 Lewis SE, McClure N. Difficulties in distinguishing between a mature spermatid and a testicular spermatozoon. Human Reproduction (Oxford, England). 13: 2979-80. PMID 9804270 DOI: 10.1093/humrep/13.10.2979  0.047
2016 Kehoe A, Dempster M, McManus J, Lewis S. Stress and coping in parents of newly born twins. Journal of Psychosomatic Obstetrics and Gynaecology. 1-9. PMID 27180877 DOI: 10.1080/0167482X.2016.1175427  0.046
2016 Glaze TA, Lewis S, Bahar S. Chimera states in a Hodgkin-Huxley model of thermally sensitive neurons. Chaos (Woodbury, N.Y.). 26: 083119. PMID 27586615 DOI: 10.1063/1.4961122  0.046
2009 Lewis S, Lynch A, Bachas L, Hampson S, Ormsbee L, Bhattacharyya D. Chelate-Modified Fenton Reaction for the Degradation of Trichloroethylene in Aqueous and Two-Phase Systems. Environmental Engineering Science. 26: 849-859. PMID 20418966 DOI: 10.1089/Ees.2008.0277  0.046
1999 Steele EK, Lewis SE, McClure N. Science versus clinical adventurism in treatment of azoospermia. Lancet (London, England). 353: 516-7. PMID 10028976 DOI: 10.1016/S0140-6736(98)00312-2  0.046
2010 Simon L, Brunborg G, Stevenson M, Lutton D, McManus J, Lewis SE. Clinical significance of sperm DNA damage in assisted reproduction outcome. Human Reproduction (Oxford, England). 25: 1594-608. PMID 20447937 DOI: 10.1093/humrep/deq103  0.046
2006 McVicar C, O’Neill D, McClure N, Clements B, McCullough S, Lewis S. Effects of Vasectomy on Spermatogenesis and Fertility Outcome After Testicular Sperm Extraction Combined With ICSI Journal of Urology. 175: 1827-1827. DOI: 10.1016/S0022-5347(06)00176-5  0.045
2012 Lewis SE, Hodel A, Sturdy T, Todd R, Weigl C. Impact of acanthocephalan parasites on aggregation behavior of amphipods (Gammarus pseudolimnaeus). Behavioural Processes. 91: 159-63. PMID 22906412 DOI: 10.1016/j.beproc.2012.07.009  0.044
1999 Donnelly E, McClure N, Lewis S. P-027. Glutathione and hypotaurine supplementation in vitro: effects on motility, baseline and induced DNA damage and production of reactive oxygen species in human spermatozoa Human Reproduction. 14: 153-153. DOI: 10.1093/humrep/14.Suppl_3.153  0.044
2008 Alvarez JG, Lewis S. Sperm chromatin structure assay parameters measured after density gradient centrifugation are not predictive of the outcome of ART. Human Reproduction (Oxford, England). 23: 1235-6; author reply. PMID 18325886 DOI: 10.1093/humrep/den053  0.044
2007 O'Neill DA, McVicar CM, McClure N, Maxwell P, Cooke I, Pogue KM, Lewis SE. Reduced sperm yield from testicular biopsies of vasectomized men is due to increased apoptosis. Fertility and Sterility. 87: 834-41. PMID 17241627 DOI: 10.1016/j.fertnstert.2006.11.018  0.043
2006 Old GH, Leeks GJL, Packman JC, Smith BPG, Lewis S, Hewitt EJ. River flow and associated transport of sediments and solutes through a highly urbanised catchment, Bradford, West Yorkshire Science of the Total Environment. 360: 98-108. PMID 16214202 DOI: 10.1016/j.scitotenv.2005.08.028  0.042
2014 Ibn-Salem J, Köhler S, Love MI, Chung HR, Huang N, Hurles ME, Haendel M, Washington NL, Smedley D, Mungall CJ, Lewis SE, Ott CE, Bauer S, Schofield PN, Mundlos S, et al. Deletions of chromosomal regulatory boundaries are associated with congenital disease. Genome Biology. 15: 423. PMID 25315429 DOI: 10.1186/S13059-014-0423-1  0.042
2009 Glenn DR, McClure N, Cosby SL, Stevenson M, Lewis SE. Sildenafil citrate (Viagra) impairs fertilization and early embryo development in mice. Fertility and Sterility. 91: 893-9. PMID 18325509 DOI: 10.1016/j.fertnstert.2007.12.014  0.04
2013 Hinkle RJ, Lewis SE. Atom economical, one-pot, three-reaction cascade to novel tricyclic 2,4-dihydro-1H-benzo[f]isochromenes. Organic Letters. 15: 4070-3. PMID 23901903 DOI: 10.1021/ol401600j  0.039
2018 Bender Atik R, Christiansen OB, Elson J, Kolte AM, Lewis S, Middeldorp S, Nelen W, Peramo B, Quenby S, Vermeulen N, Goddijn M. ESHRE guideline: recurrent pregnancy loss. Human Reproduction Open. 2018: hoy004. PMID 31486805 DOI: 10.1093/HROPEN/HOY004  0.038
2009 Lewis S, Smuleac V, Montague A, Bachas L, Bhattacharyya D. Iron-Functionalized Membranes for Nanoparticle Synthesis and Reactions. Separation Science and Technology. 44: 3289-3311. PMID 20556223 DOI: 10.1080/01496390903212805  0.037
2003 O'Connell M, McClure N, Lewis SE. A comparison of mitochondrial and nuclear DNA status in testicular sperm from fertile men and those with obstructive azoospermia. Human Reproduction (Oxford, England). 17: 1571-7. PMID 12042280 DOI: 10.1093/HUMREP/17.6.1571  0.036
2015 Thapa D, Nichols CE, Lewis SE, Shepherd DL, Jagannathan R, Croston TL, Tveter KJ, Holden AA, Baseler WA, Hollander JM. Transgenic overexpression of mitofilin attenuates diabetes mellitus-associated cardiac and mitochondria dysfunction. Journal of Molecular and Cellular Cardiology. 79: 212-23. PMID 25463274 DOI: 10.1016/j.yjmcc.2014.11.008  0.035
2011 Andersson DA, Gentry C, Alenmyr L, Killander D, Lewis SE, Andersson A, Bucher B, Galzi JL, Sterner O, Bevan S, Högestätt ED, Zygmunt PM. TRPA1 mediates spinal antinociception induced by acetaminophen and the cannabinoid Δ(9)-tetrahydrocannabiorcol. Nature Communications. 2: 551. PMID 22109525 DOI: 10.1038/ncomms1559  0.035
1999 Donnelly E, McClure N, Lewis S. P-026. Detection of cell death in situ and determination of DNA integrity in neat semen and prepared human spermatozoa Human Reproduction. 14: 152-153. DOI: 10.1093/humrep/14.Suppl_3.152-a  0.034
1997 Donnelly E, Lewis S, Thompson W. P-036. Effect of antioxidant supplementation in vitro on human sperm motility parameters using CASA Human Reproduction. 12: 137-137. DOI: 10.1093/HUMREP/12.SUPPL_2.137-A  0.034
2012 Lewis SE, Holmes PS, Woby SR, Hindle J, Fowler NE. Short-term effect of superficial heat treatment on paraspinal muscle activity, stature recovery, and psychological factors in patients with chronic low back pain. Archives of Physical Medicine and Rehabilitation. 93: 367-72. PMID 22289251 DOI: 10.1016/j.apmr.2011.08.043  0.034
2013 Namasivayam AK, Le DJ, Hard J, Lewis SE, Neufeld C, van Lieshout P. Peripheral auditory tuning for vowels. Journal of Integrative Neuroscience. 12: 461-74. PMID 24372066 DOI: 10.1142/S0219635213500283  0.034
2014 Lyall CL, Shotton CC, Pérez-Salvia M, Panto? GD, Lewis SE. Direct core functionalisation of naphthalenediimides by iridium catalysed C-H borylation. Chemical Communications (Cambridge, England). 50: 13837-40. PMID 25259375 DOI: 10.1039/C4Cc06522K  0.033
2011 van der Waals D, Pugh T, Khan MA, Stewart AJ, Johnson AL, Lewis SE. A cobalt complex of a microbial arene oxidation product. Chemistry Central Journal. 5: 80. PMID 22152033 DOI: 10.1186/1752-153X-5-80  0.033
2014 Croston TL, Thapa D, Holden AA, Tveter KJ, Lewis SE, Shepherd DL, Nichols CE, Long DM, Olfert IM, Jagannathan R, Hollander JM. Functional deficiencies of subsarcolemmal mitochondria in the type 2 diabetic human heart. American Journal of Physiology. Heart and Circulatory Physiology. 307: H54-65. PMID 24778174 DOI: 10.1152/Ajpheart.00845.2013  0.032
2016 Buels R, Yao E, Diesh CM, Hayes RD, Munoz-Torres M, Helt G, Goodstein DM, Elsik CG, Lewis SE, Stein L, Holmes IH. JBrowse: a dynamic web platform for genome visualization and analysis. Genome Biology. 17: 66. PMID 27072794 DOI: 10.1186/S13059-016-0924-1  0.032
2020 Esteves SC, Lewis SE. When to pull the trigger in nonazoospermic infertile men undergoing intracytoplasmic sperm injection? Asian Journal of Andrology. PMID 32167076 DOI: 10.4103/aja.aja_4_20  0.032
2000 Steele EK, Kelly JD, Lewis SE, McNally JA, Sloan JM, McClure N. Testicular sperm extraction by Trucut needle and milking of seminiferous tubules: a technique with high yield and patient acceptability. Fertility and Sterility. 74: 380-3. PMID 10927063 DOI: 10.1016/S0015-0282(00)00655-5  0.031
2011 Palframan MJ, Kociok-Köhn G, Lewis SE. Total synthesis of (+)-grandifloracin by iron complexation of a microbial arene oxidation product. Organic Letters. 13: 3150-3. PMID 21591657 DOI: 10.1021/ol201057r  0.03
2012 Lewis SE, Nocon RS, Tang H, Park SY, Vable AM, Casalino LP, Huang ES, Quinn MT, Burnet DL, Summerfelt WT, Birnberg JM, Chin MH. Patient-centered medical home characteristics and staff morale in safety net clinics. Archives of Internal Medicine. 172: 23-31. PMID 22232143 DOI: 10.1001/archinternmed.2011.580  0.03
1999 Steele EK, McClure N, Maxwell RJ, Lewis SE. A comparison of DNA damage in testicular and proximal epididymal spermatozoa in obstructive azoospermia. Molecular Human Reproduction. 5: 831-5. PMID 10460221 DOI: 10.1093/MOLEHR/5.9.831  0.03
2021 Robinson DL, Lewis S, Regan C. Spontaneous spinal epidural abscess in pregnancy: a case series. Spinal Cord Series and Cases. 7: 79. PMID 34446695 DOI: 10.1038/s41394-021-00437-y  0.03
1999 O'Connell M, Donnelly E, McClure N, Lewis S. P-025. Effects of cryopreservation on rhodamine 123 uptake and vitality of human spermatozoa Human Reproduction. 14: 152-152. DOI: 10.1093/humrep/14.Suppl_3.152  0.029
2013 Sullivan-Mee M, Lewis SE, Pensyl D, Gerhardt G, Halverson KD, Qualls C. Factors influencing intermethod agreement between goldmann applanation, pascal dynamic contour, and ocular response analyzer tonometry. Journal of Glaucoma. 22: 487-95. PMID 22407388 DOI: 10.1097/IJG.0b013e31824cd08d  0.028
2016 Hu H, Doll DN, Sun J, Lewis SE, Wimsatt JH, Kessler MJ, Simpkins JW, Ren X. Mitochondrial Impairment in Cerebrovascular Endothelial Cells is Involved in the Correlation between Body Temperature and Stroke Severity. Aging and Disease. 7: 14-27. PMID 26816660 DOI: 10.14336/Ad.2015.0906  0.028
2001 McVicar C, McClure N, Lewis S. DNA damage in human sperm using alkaline and neutral Comet assays Biochemical Society Transactions. 29: A116-A116. DOI: 10.1042/BST029A116B  0.028
2000 Steele EK, McClure N, Lewis S. A comparison of the morphology of testicular, epididymal, and ejaculated sperm from fertile men and men with obstructive azoospermia. Fertility and Sterility. 73: 1099-103. PMID 10856464 DOI: 10.1016/S0015-0282(00)00523-9  0.027
2012 Bainbridge ZT, Wolanski E, Alvarez-Romero JG, Lewis SE, Brodie JE. Fine sediment and nutrient dynamics related to particle size and floc formation in a Burdekin River flood plume, Australia. Marine Pollution Bulletin. 65: 236-48. PMID 22364951 DOI: 10.1016/j.marpolbul.2012.01.043  0.027
2003 Old GH, Leeks GJ, Packman JC, Smith BP, Lewis S, Hewitt EJ, Holmes M, Young A. The impact of a convectional summer rainfall event on river flow and fine sediment transport in a highly urbanised catchment: Bradford, West Yorkshire. The Science of the Total Environment. 314: 495-512. PMID 14499547  0.024
2013 Croston TL, Shepherd DL, Thapa D, Nichols CE, Lewis SE, Dabkowski ER, Jagannathan R, Baseler WA, Hollander JM. Evaluation of the cardiolipin biosynthetic pathway and its interactions in the diabetic heart. Life Sciences. 93: 313-22. PMID 23872101 DOI: 10.1016/j.lfs.2013.07.005  0.024
2015 Doll DN, Hu H, Sun J, Lewis SE, Simpkins JW, Ren X. Mitochondrial crisis in cerebrovascular endothelial cells opens the blood-brain barrier. Stroke; a Journal of Cerebral Circulation. 46: 1681-9. PMID 25922503 DOI: 10.1161/Strokeaha.115.009099  0.024
2023 Kowalski RG, Ledreux A, Violette JE, Neumann RT, Ornelas D, Yu X, Griffiths SG, Lewis S, Nash P, Monte AA, Coughlan CM, Deighan C, Grotta JC, Jones WJ, Graner MW. Rapid Activation of Neuroinflammation in Stroke: Plasma and Extracellular Vesicles Obtained on a Mobile Stroke Unit. Stroke. PMID 36727508 DOI: 10.1161/STROKEAHA.122.041422  0.024
2013 Baseler WA, Dabkowski ER, Jagannathan R, Thapa D, Nichols CE, Shepherd DL, Croston TL, Powell M, Razunguzwa TT, Lewis SE, Schnell DM, Hollander JM. Reversal of mitochondrial proteomic loss in Type 1 diabetic heart with overexpression of phospholipid hydroperoxide glutathione peroxidase. American Journal of Physiology. Regulatory, Integrative and Comparative Physiology. 304: R553-65. PMID 23408027 DOI: 10.1152/Ajpregu.00249.2012  0.024
2015 Lewis SE. Cycloparaphenylenes and related nanohoops. Chemical Society Reviews. 44: 2221-304. PMID 25735813 DOI: 10.1039/c4cs00366g  0.021
2015 Jagannathan R, Thapa D, Nichols CE, Shepherd DL, Stricker JC, Croston TL, Baseler WA, Lewis SE, Martinez I, Hollander JM. Translational Regulation of the Mitochondrial Genome Following Redistribution of Mitochondrial MicroRNA (MitomiR) in the Diabetic Heart. Circulation. Cardiovascular Genetics. PMID 26377859 DOI: 10.1161/CIRCGENETICS.115.001067  0.02
2003 O'Connell M, McClure N, Powell LA, Steele EK, Lewis SE. Differences in mitochondrial and nuclear DNA status of high-density and low-density sperm fractions after density centrifugation preparation. Fertility and Sterility. 79: 754-62. PMID 12620488 DOI: 10.1016/S0015-0282(02)04827-6  0.02
2011 Pilgrim S, Kociok-Köhn G, Lloyd MD, Lewis SE. "Inosaminoacids": novel inositol-amino acid hybrid structures accessed by microbial arene oxidation. Chemical Communications (Cambridge, England). 47: 4799-801. PMID 21409268 DOI: 10.1039/c1cc10643k  0.019
2015 Johnston AM, Lewis SE. Decontaminating Ebola-infected ultrasound probes. Anaesthesia. 70: 628-9. PMID 25866043 DOI: 10.1111/anae.13060  0.019
2007 Clubb S, Hertz I, Lewis S, McGrath B, Romagnano A. The pros and cons of selling unweaned baby birds. Journal of Avian Medicine and Surgery. 21: 228-32. PMID 18087941 DOI: 10.1647/1082-6742(2007)21[228:TPACOS]2.0.CO;2  0.016
2010 Mercer SJ, Lewis SE, Wilson SJ, Groom P, Mahoney PF. Creating airway management guidelines for casualties with penetrating airway injuries. Journal of the Royal Army Medical Corps. 156: 355-60. PMID 21302656 DOI: 10.1136/JRAMC-156-04S-15  0.013
2002 Steele EK, Lewis SE, McClure N. Azoospermia - ‘to infinity and beyond’ The Obstetrician & Gynaecologist. 4: 71-75. DOI: 10.1576/TOAG.2002.4.2.71  0.012
2008 Bozeman S, Lewis S. Schnitzler syndrome successfully treated with methotrexate. Annals of Allergy, Asthma & Immunology : Official Publication of the American College of Allergy, Asthma, & Immunology. 101: 219. PMID 18727480 DOI: 10.1016/S1081-1206(10)60213-X  0.012
2015 Lewis SE, Kumar K. The paternal genome and the health of the assisted reproductive technology child. Asian Journal of Andrology. 17: 616-22. PMID 25926606 DOI: 10.4103/1008-682X.153301  0.01
2014 Ali Khan M, Wood PJ, Lamb-Guhren NM, Caggiano L, Kociok-Köhn G, Tosh D, Lewis SE. The enone motif of (+)-grandifloracin is not essential for 'anti-austerity' antiproliferative activity. Bioorganic & Medicinal Chemistry Letters. 24: 2815-9. PMID 24835628 DOI: 10.1016/j.bmcl.2014.04.111  0.01
2012 Lewis SE, Fowler NE, Woby SR, Holmes PS. Defensive coping styles, anxiety and chronic low back pain. Physiotherapy. 98: 86-8. PMID 22265389 DOI: 10.1016/j.physio.2011.10.003  0.01
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