Tom Baden - Publications

Affiliations: 
University of Cambridge, Cambridge, England, United Kingdom 

67 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Abraham E, Hartmann H, Yoshimatsu T, Baden T, Brand M. Restoration of cone-circuit functionality in the regenerating adult zebrafish retina. Developmental Cell. PMID 39096897 DOI: 10.1016/j.devcel.2024.07.005  0.548
2024 Hellevik AM, Mardoum P, Hahn J, Kölsch Y, D'Orazi FD, Suzuki SC, Godinho L, Lawrence O, Rieke F, Shekhar K, Sanes JR, Baier H, Baden T, Wong RO, Yoshimatsu T. Ancient origin of the rod bipolar cell pathway in the vertebrate retina. Nature Ecology & Evolution. PMID 38627529 DOI: 10.1038/s41559-024-02404-w  0.664
2024 Yoshimatsu T, Baden T. New twists in the evolution of retinal direction selectivity. Plos Biology. 22: e3002538. PMID 38422167 DOI: 10.1371/journal.pbio.3002538  0.485
2024 Baden T. Ancestral photoreceptor diversity as the basis of visual behaviour. Nature Ecology & Evolution. PMID 38253752 DOI: 10.1038/s41559-023-02291-7  0.355
2024 Baden T. From water to land: Evolution of photoreceptor circuits for vision in air. Plos Biology. 22: e3002422. PMID 38252616 DOI: 10.1371/journal.pbio.3002422  0.341
2023 Yoshimatsu T, Mardoum P, Hahn J, Kolsch Y, Suzuki S, Godinho L, Lawrence O, Rieke F, Shekhar K, Sanes J, Baier H, Baden T, Wong R. Ancient origin of the rod bipolar cell pathway in the vertebrate retina. Research Square. PMID 37886445 DOI: 10.21203/rs.3.rs-3411693/v1  0.657
2023 Hellevik AM, Mardoum P, Hahn J, Kölsch Y, D'Orazi FD, Suzuki SC, Godinho L, Lawrence O, Rieke F, Shekhar K, Sanes JR, Baier H, Baden T, Wong RO, Yoshimatsu T. Ancient origin of the rod bipolar cell pathway in the vertebrate retina. Biorxiv : the Preprint Server For Biology. PMID 37771914 DOI: 10.1101/2023.09.12.557433  0.658
2023 Seifert M, Roberts PA, Kafetzis G, Osorio D, Baden T. Birds multiplex spectral and temporal visual information via retinal On- and Off-channels. Nature Communications. 14: 5308. PMID 37652912 DOI: 10.1038/s41467-023-41032-z  0.327
2023 Wang X, Roberts PA, Yoshimatsu T, Lagnado L, Baden T. Amacrine cells differentially balance zebrafish color circuits in the central and peripheral retina. Cell Reports. 42: 112055. PMID 36757846 DOI: 10.1016/j.celrep.2023.112055  0.729
2022 Strauss S, Korympidou MM, Ran Y, Franke K, Schubert T, Baden T, Berens P, Euler T, Vlasits AL. Center-surround interactions underlie bipolar cell motion sensitivity in the mouse retina. Nature Communications. 13: 5574. PMID 36163124 DOI: 10.1038/s41467-022-32762-7  0.746
2021 Bartel P, Yoshimatsu T, Janiak FK, Baden T. Spectral inference reveals principal cone-integration rules of the zebrafish inner retina. Current Biology : Cb. 31: 5214-5226.e4. PMID 34653362 DOI: 10.1016/j.cub.2021.09.047  0.572
2021 Yoshimatsu T, Bartel P, Schröder C, Janiak FK, St-Pierre F, Berens P, Baden T. Ancestral circuits for vertebrate color vision emerge at the first retinal synapse. Science Advances. 7: eabj6815. PMID 34644120 DOI: 10.1126/sciadv.abj6815  0.54
2021 Schroeder C, Oesterle J, Berens P, Yoshimatsu T, Baden T. Distinct Synaptic Transfer Functions in Same-Type Photoreceptors. Elife. 10. PMID 34269177 DOI: 10.7554/eLife.67851  0.544
2021 Dehmelt FA, Meier R, Hinz J, Yoshimatsu T, Simacek CA, Huang R, Wang K, Baden T, Arrenberg AB. Spherical arena reveals optokinetic response tuning to stimulus location, size, and frequency across entire visual field of larval zebrafish. Elife. 10. PMID 34100720 DOI: 10.7554/eLife.63355  0.549
2020 Zhou M, Bear J, Roberts PA, Janiak FK, Semmelhack J, Yoshimatsu T, Baden T. Zebrafish Retinal Ganglion Cells Asymmetrically Encode Spectral and Temporal Information across Visual Space. Current Biology : Cb. PMID 32531283 DOI: 10.1016/J.Cub.2020.05.055  0.627
2020 Yoshimatsu T, Schröder C, Nevala NE, Berens P, Baden T. Fovea-like Photoreceptor Specializations Underlie Single UV Cone Driven Prey-Capture Behavior in Zebrafish. Neuron. PMID 32473094 DOI: 10.1016/J.Neuron.2020.04.021  0.636
2020 Ran Y, Huang Z, Baden T, Schubert T, Baayen H, Berens P, Franke K, Euler T. Type-specific dendritic integration in mouse retinal ganglion cells. Nature Communications. 11: 2101. PMID 32355170 DOI: 10.1038/S41467-020-15867-9  0.77
2020 Seifert M, Baden T, Osorio D. The retinal basis of vision in chicken. Seminars in Cell & Developmental Biology. PMID 32295724 DOI: 10.1016/J.Semcdb.2020.03.011  0.462
2020 Rieke F, Baden T, Sinha R. Decision letter: True S-cones are concentrated in the ventral mouse retina and wired for color detection in the upper visual field Elife. DOI: 10.7554/Elife.56840.Sa1  0.362
2020 Seifert M, Roberts P, Osorio D, Baden T. The Retinal Basis of Colour Vision in Chicks F1000research. 9. DOI: 10.7490/F1000Research.1117803.1  0.412
2020 Zhou M, Bear J, Roberts PA, Janiak FK, Yoshimatsu T, Baden T. What the larval zebrafish's eye tells the zebrafish's brain F1000research. 9. DOI: 10.7490/F1000Research.1117801.1  0.476
2020 Bear J, Zhou M, Roberts P, Yoshimatsu T, semmelhack J, Baden T. Regional specializations among retinal ganglion cells in the larval zebrafish F1000research. 9. DOI: 10.7490/F1000Research.1117800.1  0.584
2020 Bartel P, Yoshimatsu T, Janiak F, Baden T. Colour channels in the zebrafish eye and brain F1000research. 9. DOI: 10.7490/F1000Research.1117798.1  0.487
2020 Zimmermann M, Maia Chagas A, Bartel P, Pop S, Prieto-Godino L, Baden T. LED Zappelin’: An open source LED controller for arbitrary spectrum visual stimulation and optogenetics during 2-photon imaging Hardwarex. 8: e00127. DOI: 10.1016/J.Ohx.2020.E00127  0.773
2019 Baden T, Euler T, Berens P. Understanding the retinal basis of vision across species. Nature Reviews. Neuroscience. PMID 31780820 DOI: 10.1038/S41583-019-0242-1  0.651
2019 Franke K, Maia Chagas A, Zhao Z, Zimmermann MJ, Bartel P, Qiu Y, Szatko KP, Baden T, Euler T. An arbitrary-spectrum spatial visual stimulator for vision research. Elife. 8. PMID 31545172 DOI: 10.7554/Elife.48779  0.776
2019 Nevala NE, Baden T. A low-cost hyperspectral scanner for natural imaging and the study of animal colour vision above and under water. Scientific Reports. 9: 10799. PMID 31346217 DOI: 10.1038/S41598-019-47220-6  0.311
2019 Baden T, Osorio D. The Retinal Basis of Vertebrate Color Vision. Annual Review of Vision Science. 5: 177-200. PMID 31226010 DOI: 10.1146/ANNUREV-VISION-091718-014926  0.365
2019 Franke K, Chagas AM, Zhao Z, Zimmermann MJ, Bartel P, Qiu Y, Szatko KP, Baden T, Euler T. Author response: An arbitrary-spectrum spatial visual stimulator for vision research Elife. DOI: 10.7554/Elife.48779.024  0.753
2019 Yoshimatsu T, Bartel P, Janial F, Baden T. Optimal rotation of colour space by zebrafish cones in vivo F1000research. 8. DOI: 10.7490/F1000Research.1117539.1  0.475
2019 Janiak F, Bartel P, Bale M, Yoshimatsu T, Komulainen E, Staras K, Prieto-Godino LL, Euler T, Maravall M, Baden T. A non-collimated 2-photon microscope for rapid and high-resolution 3D random access mesoscale imaging F1000research. 8. DOI: 10.7490/F1000Research.1116964.1  0.483
2018 Baden T, James B, Zimmermann MJY, Bartel P, Grijseels D, Euler T, Lagnado L, Maravall M. Spikeling: A low-cost hardware implementation of a spiking neuron for neuroscience teaching and outreach. Plos Biology. 16: e2006760. PMID 30365493 DOI: 10.1371/Journal.Pbio.2006760  0.712
2018 Zimmermann MJY, Nevala NE, Yoshimatsu T, Osorio D, Nilsson DE, Berens P, Baden T. Zebrafish Differentially Process Color across Visual Space to Match Natural Scenes. Current Biology : Cb. PMID 29937350 DOI: 10.1016/J.Cub.2018.04.075  0.639
2018 Bartel P, Yoshimatsu T, Janiak F, Baden T. Zebrafish colour vision: near-optimal rotation of chromatic signals at the visual system's first synapse F1000research. 7. DOI: 10.7490/F1000Research.1116334.1  0.569
2018 Yoshimatsu T, Schröder C, Berens P, Baden T. Functional recordings at the first synaptic layer of the visual system in vivo F1000research. 7. DOI: 10.7490/F1000Research.1116333.1  0.578
2018 Janiak F, Bartel P, Bale M, Yoshimatsu T, Zhou M, Prieto-Godino LL, Euler T, Maravall M, Baden T. An ultra-low-cost module for large field-of-view 3D random access 2-photon microscopy F1000research. 7. DOI: 10.7490/F1000Research.1116332.1  0.648
2017 Chapot CA, Behrens C, Rogerson LE, Baden T, Pop S, Berens P, Euler T, Schubert T. Local Signals in Mouse Horizontal Cell Dendrites. Current Biology : Cb. 27: 3603-3615.e5. PMID 29174891 DOI: 10.1016/J.Cub.2017.10.050  0.683
2017 Maia Chagas A, Prieto-Godino LL, Arrenberg AB, Baden T. The €100 lab: A 3D-printable open-source platform for fluorescence microscopy, optogenetics, and accurate temperature control during behaviour of zebrafish, Drosophila, and Caenorhabditis elegans. Plos Biology. 15: e2002702. PMID 28719603 DOI: 10.1371/Journal.Pbio.2002702  0.305
2017 Franke K, Baden T. General features of inhibition in the inner retina. The Journal of Physiology. PMID 28332227 DOI: 10.1113/Jp273648  0.718
2017 Baden T, Schaeffel F, Berens P. Visual Neuroscience: A Retinal Ganglion Cell to Report Image Focus? Current Biology : Cb. 27: R139-R141. PMID 28222289 DOI: 10.1016/J.Cub.2016.12.022  0.442
2017 Franke K, Berens P, Schubert T, Bethge M, Euler T, Baden T. Inhibition decorrelates visual feature representations in the inner retina. Nature. PMID 28178238 DOI: 10.1038/Nature21394  0.802
2017 Nevala NE, Nilsson D, Osorio D, Baden T. Mapping the natural visual world of the zebrafish (Danio rerio) F1000research. 6. DOI: 10.7490/F1000Research.1115119.1  0.313
2017 Franke K, Berens P, Schubert T, Bethge M, Euler T, Baden T. Die Retina im Rausch der Kanäle Nature. 234: 411-412. DOI: 10.1055/S-0043-104423  0.757
2016 Baden T, Euler T. Retinal Physiology: Non-Bipolar-Cell Excitatory Drive in the Inner Retina. Current Biology : Cb. 26: R706-8. PMID 27505240 DOI: 10.1016/J.Cub.2016.03.065  0.678
2016 Euler T, Baden T. Computational neuroscience: Species-specific motion detectors. Nature. PMID 27350240 DOI: 10.1038/Nature18454  0.678
2016 Theis L, Berens P, Froudarakis E, Reimer J, Román Rosón M, Baden T, Euler T, Tolias AS, Bethge M. Benchmarking Spike Rate Inference in Population Calcium Imaging. Neuron. 90: 471-82. PMID 27151639 DOI: 10.1016/J.Neuron.2016.04.014  0.589
2016 Baden T, Berens P, Franke K, Román Rosón M, Bethge M, Euler T. The functional diversity of retinal ganglion cells in the mouse. Nature. PMID 26735013 DOI: 10.1038/Nature16468  0.783
2015 Baden T, Chagas AM, Gage GJ, Marzullo TC, Prieto-Godino LL, Euler T. Correction: open labware: 3-d printing your own lab equipment. Plos Biology. 13: e1002175. PMID 25996924 DOI: 10.1371/Journal.Pbio.1002175  0.551
2015 Kulkarni M, Schubert T, Baden T, Wissinger B, Euler T, Paquet-Durand F. Imaging Ca2+ dynamics in cone photoreceptor axon terminals of the mouse retina. Journal of Visualized Experiments : Jove. e52588. PMID 25993489 DOI: 10.3791/52588  0.65
2015 Baden T, Chagas AM, Gage G, Marzullo T, Prieto-Godino LL, Euler T. Open Labware: 3-D printing your own lab equipment. Plos Biology. 13: e1002086. PMID 25794301 DOI: 10.1371/Journal.Pbio.1002086  0.565
2015 Kulkarni M, Schubert T, Baden T, Wissinger B, Euler T, Paquet-Durand F. Imaging Ca2+ dynamics in cone photoreceptor axon terminals of the mouse retina Journal of Visualized Experiments. 2015. DOI: 10.3791/52588  0.577
2014 Baden T, Nikolaev A, Esposti F, Dreosti E, Odermatt B, Lagnado L. A synaptic mechanism for temporal filtering of visual signals. Plos Biology. 12: e1001972. PMID 25333637 DOI: 10.1371/Journal.Pbio.1001972  0.777
2014 Euler T, Haverkamp S, Schubert T, Baden T. Retinal bipolar cells: elementary building blocks of vision. Nature Reviews. Neuroscience. 15: 507-19. PMID 25158357 DOI: 10.1038/Nrn3783  0.707
2013 Baden T, Euler T. Early vision: where (some of) the magic happens. Current Biology : Cb. 23: R1096-8. PMID 24355785 DOI: 10.1016/J.Cub.2013.10.066  0.683
2013 Baden T, Schubert T, Chang L, Wei T, Zaichuk M, Wissinger B, Euler T. A tale of two retinal domains: near-optimal sampling of achromatic contrasts in natural scenes through asymmetric photoreceptor distribution. Neuron. 80: 1206-17. PMID 24314730 DOI: 10.1016/J.Neuron.2013.09.030  0.675
2013 Baden T, Euler T, Weckström M, Lagnado L. Spikes and ribbon synapses in early vision. Trends in Neurosciences. 36: 480-8. PMID 23706152 DOI: 10.1016/J.Tins.2013.04.006  0.768
2013 Baden T, Berens P, Bethge M, Euler T. Spikes in mammalian bipolar cells support temporal layering of the inner retina. Current Biology : Cb. 23: 48-52. PMID 23246403 DOI: 10.1016/J.Cub.2012.11.006  0.688
2012 Auferkorte ON, Baden T, Kaushalya SK, Zabouri N, Rudolph U, Haverkamp S, Euler T. GABA(A) receptors containing the α2 subunit are critical for direction-selective inhibition in the retina. Plos One. 7: e35109. PMID 22506070 DOI: 10.1371/Journal.Pone.0035109  0.652
2011 Baden T, Esposti F, Nikolaev A, Lagnado L. Spikes in retinal bipolar cells phase-lock to visual stimuli with millisecond precision. Current Biology : Cb. 21: 1859-69. PMID 22055291 DOI: 10.1016/J.Cub.2011.09.042  0.815
2011 Dreosti E, Esposti F, Baden T, Lagnado L. In vivo evidence that retinal bipolar cells generate spikes modulated by light. Nature Neuroscience. 14: 951-2. PMID 21706020 DOI: 10.1038/Nn.2841  0.793
2011 Cederlund ML, Morrissey ME, Baden T, Scholz D, Vendrell V, Lagnado L, Connaughton VP, Kennedy BN. Zebrafish Tg(7.2mab21l2:EGFP)ucd2 transgenics reveal a unique population of retinal amacrine cells. Investigative Ophthalmology & Visual Science. 52: 1613-21. PMID 21051702 DOI: 10.1167/Iovs.10-5376  0.636
2010 Baden T, Hedwig B. Primary afferent depolarization and frequency processing in auditory afferents. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 14862-9. PMID 21048145 DOI: 10.1523/Jneurosci.2734-10.2010  0.621
2009 Baden T, Hedwig B. Dynamics of free intracellular Ca2+ during synaptic and spike activity of cricket tibial motoneurons. The European Journal of Neuroscience. 29: 1357-68. PMID 19309317 DOI: 10.1111/J.1460-9568.2009.06694.X  0.6
2008 Baden T, Hedwig B. Front leg movements and tibial motoneurons underlying auditory steering in the cricket (Gryllus bimaculatus deGeer). The Journal of Experimental Biology. 211: 2123-33. PMID 18552302 DOI: 10.1242/Jeb.019125  0.599
2008 Baden T, Zorovic M, Hedwig B. Motorische Kontrolle der akustischen Orientierung von Grillen E-Neuroforum. 14. DOI: 10.1515/Nf-2008-0403  0.721
2008 Baden T, Zorovic M, Hedwig B. Motor control of auditory orientation in crickets | Motorische Kontrolle der akustischen Orientierung von Grillen Neuroforum. 14: 267-273.  0.734
2007 Baden T, Hedwig B. Neurite-specific Ca2+ dynamics underlying sound processing in an auditory interneurone. Developmental Neurobiology. 67: 68-80. PMID 17443773 DOI: 10.1002/Dneu.20323  0.621
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