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Sevinc Ercan, Ph.D. - Publications

Affiliations: 
Biology University of North Carolina, Chapel Hill, Chapel Hill, NC 
Area:
C.elegans, dosage compensation, DCC
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Aharonoff A, Kim J, Washington A, Ercan S. SMC-mediated dosage compensation in evolved in the presence of an ancestral nematode mechanism. Biorxiv : the Preprint Server For Biology. PMID 38826443 DOI: 10.1101/2024.05.21.595224  0.458
2024 Breimann L, Bahry E, Zouinkhi M, Kolyvanov K, Street LA, Preibisch S, Ercan S. Analysis of developmental gene expression using smFISH and staging of embryos. Biorxiv : the Preprint Server For Biology. PMID 38798598 DOI: 10.1101/2024.05.15.594414  0.321
2022 Kim J, Jimenez DS, Ragipani B, Zhang B, Street LA, Kramer M, Albritton SE, Winterkorn LH, Morao AK, Ercan S. Condensin DC loads and spreads from recruitment sites to create loop-anchored TADs in C. elegans. Elife. 11. PMID 36331876 DOI: 10.7554/eLife.68745  0.328
2022 Morao AK, Kim J, Obaji D, Sun S, Ercan S. Topoisomerases I and II facilitate condensin DC translocation to organize and repress X chromosomes in C. elegans. Molecular Cell. PMID 36302374 DOI: 10.1016/j.molcel.2022.10.002  0.39
2022 Ragipani B, Albritton SE, Morao AK, Mesquita D, Kramer M, Ercan S. Increased gene dosage and mRNA expression from chromosomal duplications in C. elegans. G3 (Bethesda, Md.). PMID 35731207 DOI: 10.1093/g3journal/jkac151  0.379
2021 Breimann L, Morao AK, Kim J, Jimenez DS, Maryn N, Bikkasani K, Carrozza MJ, Albritton SE, Kramer M, Street LA, Cerimi K, Schumann VF, Bahry E, Preibisch S, Woehler A, ... Ercan S, et al. The H4K20 demethylase DPY-21 regulates the dynamics of condensin DC binding. Journal of Cell Science. PMID 34918745 DOI: 10.1242/jcs.258818  0.394
2019 Street LA, Morao AK, Winterkorn LH, Jiao CY, Albritton SE, Sadic M, Kramer M, Ercan S. Binding of an -Specific Condensin Correlates with a Reduction in Active Histone Modifications at Gene Regulatory Elements. Genetics. 212: 729-742. PMID 31123040 DOI: 10.1534/Genetics.119.302254  0.527
2018 Paul MR, Hochwagen A, Ercan S. Condensin action and compaction. Current Genetics. PMID 30361853 DOI: 10.1007/S00294-018-0899-4  0.488
2018 Paul MR, Markowitz TE, Hochwagen A, Ercan S. Condensin Depletion Causes Genome Decompaction Without Altering the Level of Global Gene Expression in . Genetics. PMID 29970489 DOI: 10.1534/Genetics.118.301217  0.513
2018 Albritton SE, Ercan S. Caenorhabditis elegans Dosage Compensation: Insights into Condensin-Mediated Gene Regulation Trends in Genetics. 34: 41-53. PMID 29037439 DOI: 10.1016/J.Tig.2017.09.010  0.544
2017 Albritton SE, Kranz AL, Winterkorn LH, Street LA, Ercan S. Cooperation between a hierarchical set of recruitment sites targets the X chromosome for dosage compensation. Elife. 6. PMID 28562241 DOI: 10.7554/Elife.23645  0.483
2017 Albritton SE, Kranz A, Winterkorn LH, Street LA, Ercan S. Author response: Cooperation between a hierarchical set of recruitment sites targets the X chromosome for dosage compensation Elife. DOI: 10.7554/Elife.23645.026  0.428
2016 Kramer M, Rao P, Ercan S. Sex-Biased Expression of the Caenorhabditis elegans X Chromosome Is a result of Both X Chromosome Copy Number and Sex-Specific Gene Regulation. Genetics. PMID 27356611 DOI: 10.1534/Genetics.116.190298  0.523
2016 Kramer M, Kranz A, Su A, Winterkorn LH, Albritton SE, Ercan S. Correction: Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans Plos Genetics. 12. PMID 26901497 DOI: 10.1371/Journal.Pgen.1005899  0.451
2015 Kramer M, Kranz AL, Su A, Winterkorn LH, Albritton SE, Ercan S. Developmental Dynamics of X-Chromosome Dosage Compensation by the DCC and H4K20me1 in C. elegans. Plos Genetics. 11: e1005698. PMID 26641248 DOI: 10.1371/Journal.Pgen.1005698  0.499
2015 Ercan S. Mechanisms of x chromosome dosage compensation. Journal of Genomics. 3: 1-19. PMID 25628761 DOI: 10.7150/jgen.10404  0.397
2014 Ho JW, Jung YL, Liu T, Alver BH, Lee S, Ikegami K, Sohn KA, Minoda A, Tolstorukov MY, Appert A, Parker SC, Gu T, Kundaje A, Riddle NC, Bishop E, ... ... Ercan S, et al. Comparative analysis of metazoan chromatin organization. Nature. 512: 449-52. PMID 25164756 DOI: 10.1038/Nature13415  0.48
2014 Albritton SE, Kranz AL, Rao P, Kramer M, Dieterich C, Ercan S. Sex-biased gene expression and evolution of the x chromosome in nematodes. Genetics. 197: 865-83. PMID 24793291 DOI: 10.1534/Genetics.114.163311  0.511
2014 Askjaer P, Ercan S, Meister P. Modern techniques for the analysis of chromatin and nuclear organization in C. elegans. Wormbook : the Online Review of C. Elegans Biology. 1-35. PMID 24706462 DOI: 10.1895/Wormbook.1.169.1  0.382
2014 Strome S, Kelly WG, Ercan S, Lieb JD. Regulation of the X chromosomes in Caenorhabditis elegans. Cold Spring Harbor Perspectives in Biology. 6. PMID 24591522 DOI: 10.1101/Cshperspect.A018366  0.559
2013 Kranz AL, Jiao CY, Winterkorn LH, Albritton SE, Kramer M, Ercan S. Genome-wide analysis of condensin binding in Caenorhabditis elegans. Genome Biology. 14: R112. PMID 24125077 DOI: 10.1186/Gb-2013-14-10-R112  0.49
2012 Vielle A, Lang J, Dong Y, Ercan S, Kotwaliwale C, Rechtsteiner A, Appert A, Chen QB, Dose A, Egelhofer T, Kimura H, Stempor P, Dernburg A, Lieb JD, Strome S, et al. H4K20me1 contributes to downregulation of X-linked genes for C. elegans dosage compensation. Plos Genetics. 8: e1002933. PMID 23028348 DOI: 10.1371/Journal.Pgen.1002933  0.552
2012 Gassmann R, Rechtsteiner A, Yuen KW, Muroyama A, Egelhofer T, Gaydos L, Barron F, Maddox P, Essex A, Monen J, Ercan S, Lieb JD, Oegema K, Strome S, Desai A. An inverse relationship to germline transcription defines centromeric chromatin in C. elegans. Nature. 484: 534-7. PMID 22495302 DOI: 10.1038/Nature10973  0.506
2011 Deng X, Hiatt JB, Nguyen DK, Ercan S, Sturgill D, Hillier LW, Schlesinger F, Davis CA, Reinke VJ, Gingeras TR, Shendure J, Waterston RH, Oliver B, Lieb JD, Disteche CM. Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster. Nature Genetics. 43: 1179-85. PMID 22019781 DOI: 10.1038/Ng.948  0.484
2011 Ercan S, Lubling Y, Segal E, Lieb JD. High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans. Genome Research. 21: 237-44. PMID 21177966 DOI: 10.1101/Gr.115931.110  0.53
2011 Liu T, Rechtsteiner A, Egelhofer TA, Vielle A, Latorre I, Cheung MS, Ercan S, Ikegami K, Jensen M, Kolasinska-Zwierz P, Rosenbaum H, Shin H, Taing S, Takasaki T, Iniguez AL, et al. Broad chromosomal domains of histone modification patterns in C. elegans. Genome Research. 21: 227-36. PMID 21177964 DOI: 10.1101/Gr.115519.110  0.553
2010 Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, Liu T, Yip KY, Robilotto R, Rechtsteiner A, Ikegami K, Alves P, Chateigner A, Perry M, Morris M, Auerbach RK, ... ... Ercan S, et al. Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science (New York, N.Y.). 330: 1775-87. PMID 21177976 DOI: 10.1126/Science.1196914  0.496
2010 Rechtsteiner A, Ercan S, Takasaki T, Phippen TM, Egelhofer TA, Wang W, Kimura H, Lieb JD, Strome S. The histone H3K36 methyltransferase MES-4 acts epigenetically to transmit the memory of germline gene expression to progeny. Plos Genetics. 6: e1001091. PMID 20824077 DOI: 10.1371/Journal.Pgen.1001091  0.446
2009 Ercan S, Dick LL, Lieb JD. The C. elegans dosage compensation complex propagates dynamically and independently of X chromosome sequence. Current Biology : Cb. 19: 1777-87. PMID 19853451 DOI: 10.1016/J.Cub.2009.09.047  0.527
2009 Ercan S, Lieb JD. C. elegans dosage compensation: a window into mechanisms of domain-scale gene regulation. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 17: 215-27. PMID 19308702 DOI: 10.1007/S10577-008-9011-0  0.512
2008 Whittle CM, McClinic KN, Ercan S, Zhang X, Green RD, Kelly WG, Lieb JD. The genomic distribution and function of histone variant HTZ-1 during C. elegans embryogenesis. Plos Genetics. 4: e1000187. PMID 18787694 DOI: 10.1371/Journal.Pgen.1000187  0.478
2008 Ercan S, Lieb JD. Chromatin proteins do double duty. Cell. 133: 763-5. PMID 18510918 DOI: 10.1016/J.Cell.2008.05.011  0.515
2007 Ercan S, Giresi PG, Whittle CM, Zhang X, Green RD, Lieb JD. X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiation. Nature Genetics. 39: 403-8. PMID 17293863 DOI: 10.1038/Ng1983  0.555
2007 Ercan S, Whittle C, Lieb J. Chromatin immunoprecipitation from C. elegans embryos Nature Protocols. DOI: 10.1038/Nprot.2007.123  0.335
2006 Ercan S, Lieb JD. New evidence that DNA encodes its packaging. Nature Genetics. 38: 1104-5. PMID 17006463 DOI: 10.1038/Ng1006-1104  0.32
2005 Ercan S, Reese JC, Workman JL, Simpson RT. Yeast recombination enhancer is stimulated by transcription activation. Molecular and Cellular Biology. 25: 7976-87. PMID 16135790 DOI: 10.1128/Mcb.25.18.7976-7987.2005  0.398
2004 Ercan S, Simpson RT. Global chromatin structure of 45,000 base pairs of chromosome III in a- and alpha-cell yeast and during mating-type switching. Molecular and Cellular Biology. 24: 10026-35. PMID 15509803 DOI: 10.1128/Mcb.24.22.10026-10035.2004  0.414
2004 Ercan S, Carrozza MJ, Workman JL. Global nucleosome distribution and the regulation of transcription in yeast. Genome Biology. 5: 243. PMID 15461807 DOI: 10.1186/Gb-2004-5-10-243  0.387
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