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Hannah A. DeBerg, Ph.D. - Publications

Affiliations: 
2013 Physics University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
Area:
General Biophysics
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15/40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Bankston JR, DeBerg HA, Stoll S, Zagotta WN. Mechanism for the inhibition of the cAMP dependence of HCN ion channels by the auxiliary subunit TRIP8b. The Journal of Biological Chemistry. PMID 28864772 DOI: 10.1074/Jbc.M117.800722  0.566
2017 Collauto A, DeBerg HA, Kaufmann R, Zagotta WN, Stoll S, Goldfarb D. Rates and equilibrium constants of the ligand-induced conformational transition of an HCN ion channel protein domain determined by DEER spectroscopy. Physical Chemistry Chemical Physics : Pccp. PMID 28569901 DOI: 10.1039/C7Cp01925D  0.438
2015 DeBerg HA, Brzovic PS, Flynn GE, Zagotta WN, Stoll S. Structure and Energetics of Allosteric Regulation of HCN2 Ion Channels by Cyclic Nucleotides. The Journal of Biological Chemistry. PMID 26559974 DOI: 10.1074/Jbc.M115.696450  0.58
2015 DeBerg HA, Bankston JR, Rosenbaum JC, Brzovic PS, Zagotta WN, Stoll S. Structural mechanism for the regulation of HCN ion channels by the accessory protein TRIP8b. Structure (London, England : 1993). 23: 734-44. PMID 25800552 DOI: 10.1016/J.Str.2015.02.007  0.592
2015 Bankston JR, DeBerg HA, Rosenbaum JC, Brzovic PS, Stoll S, Zagotta WN. Spectroscopic and Biochemical Studies of TRIP8b Regulation of HCN Channels Biophysical Journal. 108: 348a. DOI: 10.1016/J.Bpj.2014.11.1907  0.588
2015 DeBerg HA, Islam SM, Puljung MC, Roux B, Zagotta WN, Stoll S. Allosteric Regulation of the Cyclic Nucleotide-Binding Domain in HCN Channels Biophysical Journal. 108: 192a-193a. DOI: 10.1016/J.Bpj.2014.11.1064  0.582
2014 Puljung MC, DeBerg HA, Zagotta WN, Stoll S. Double electron-electron resonance reveals cAMP-induced conformational change in HCN channels. Proceedings of the National Academy of Sciences of the United States of America. 111: 9816-21. PMID 24958877 DOI: 10.1073/Pnas.1405371111  0.565
2014 Wang Y, Liu Y, Deberg HA, Nomura T, Hoffman MT, Rohde PR, Schulten K, Martinac B, Selvin PR. Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel. Elife. 3: e01834. PMID 24550255 DOI: 10.7554/Elife.01834  0.482
2014 Wang Y, Liu Y, DeBerg HA, Nomura T, Hoffman MT, Rohde PR, Schulten K, Martinac B, Selvin PR. Author response: Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel Elife. DOI: 10.7554/Elife.01834.026  0.473
2014 DeBerg HA, Puljung MC, Zagotta WN, Stoll S. Double Electron-Electron Resonance Studies of Ligand Induced Rearrangements of HCN Channels Biophysical Journal. 106: 737a. DOI: 10.1016/J.Bpj.2013.11.4062  0.573
2013 Wang Y, DeBerg H, Nomura T, Tonks-Hoffman M, Rohde P, Martinac B, Selvin PR. Measuring the Pore-Size and Dynamics of the MscL Mechanosensitive Channel using smFRET Biophysical Journal. 104: 385a. DOI: 10.1016/J.Bpj.2012.11.2145  0.54
2012 Bialecka-Fornal M, Lee HJ, DeBerg HA, Gandhi CS, Phillips R. Single-cell census of mechanosensitive channels in living bacteria. Plos One. 7: e33077. PMID 22427953 DOI: 10.1371/Journal.Pone.0033077  0.491
2012 Wang Y, DeBerg H, Tonks-Hoffman M, Selvin PR. Measuring the Opening of MscL using Alternating Laser Excitation (ALEX) FRET Biophysical Journal. 102: 123a-124a. DOI: 10.1016/J.Bpj.2011.11.690  0.453
2011 DeBerg H, Friedman N, Nguyen CT, Simonson P, Selvin P. Measuring the Spatial Arrangement of Nmj-Nachr ion Channel Proteins in the Cell Membrane Biophysical Journal. 100: 348a. DOI: 10.1016/J.Bpj.2010.12.2096  0.396
2010 Simonson PD, Deberg HA, Ge P, Alexander JK, Jeyifous O, Green WN, Selvin PR. Counting bungarotoxin binding sites of nicotinic acetylcholine receptors in mammalian cells with high signal/noise ratios. Biophysical Journal. 99: L81-3. PMID 21081055 DOI: 10.1016/J.Bpj.2010.08.076  0.307
Low-probability matches (unlikely to be authored by this person)
2013 DeBerg HA, Blehm BH, Sheung J, Thompson AR, Bookwalter CS, Torabi SF, Schroer TA, Berger CL, Lu Y, Trybus KM, Selvin PR. Motor domain phosphorylation modulates kinesin-1 transport. The Journal of Biological Chemistry. 288: 32612-21. PMID 24072715 DOI: 10.1074/Jbc.M113.515510  0.296
2013 DeBerg HA, Blehm BH, Sheung J, Thompson AR, Torabi SF, Bookwalter CS, Berger CL, Trybus KM, Lu Y, Selvin PR. Serine 176 Phosphorylation Attenuates Kinesin's Stall Force and Biases Bidirectional Transport Biophysical Journal. 104: 382a-383a. DOI: 10.1016/J.Bpj.2012.11.2132  0.283
2022 DeBerg HA, Konecny AJ, Shows DM, Lord JD. MAdCAM-1 Costimulates T Cells through Integrin αβ to Cause Gene Expression Events Resembling Costimulation through CD28. Immunohorizons. 6: 211-223. PMID 35273097 DOI: 10.4049/immunohorizons.2200009  0.137
2016 Long SA, Thorpe J, DeBerg HA, Gersuk V, Eddy J, Harris KM, Ehlers M, Herold KC, Nepom GT, Linsley PS. Partial exhaustion of CD8 T cells and clinical response to teplizumab in new-onset type 1 diabetes. Science Immunology. 1. PMID 28664195 DOI: 10.1126/Sciimmunol.Aai7793  0.115
2021 Linsley PS, Barahmand-Pour-Whitman F, Balmas E, DeBerg HA, Flynn KJ, Hu AK, Rosasco MG, Chen J, O'Rourke C, Serti E, Gersuk VH, Motwani K, Seay HR, Brusko TM, Kwok WW, et al. Autoreactive T cell receptors with shared germline-like α chains in type 1 diabetes. Jci Insight. 6. PMID 34806648 DOI: 10.1172/jci.insight.151349  0.104
2017 Wambre E, Bajzik V, DeLong JH, O'Brien K, Nguyen QA, Speake C, Gersuk VH, DeBerg HA, Whalen E, Ni C, Farrington M, Jeong D, Robinson D, Linsley PS, Vickery BP, et al. A phenotypically and functionally distinct human TH2 cell subpopulation is associated with allergic disorders. Science Translational Medicine. 9. PMID 28768806 DOI: 10.1126/Scitranslmed.Aam9171  0.095
2020 Berkson JD, Slichter CK, DeBerg HA, Delaney MA, Woodward-Davis AS, Maurice NJ, Lwo Y, Ko A, Hsu J, Chiu YW, Linsley PS, Dixon D, Prlic M. Inflammatory Cytokines Induce Sustained CTLA-4 Cell Surface Expression on Human MAIT Cells. Immunohorizons. 4: 14-22. PMID 31974109 DOI: 10.4049/immunohorizons.1900061  0.095
2020 Sheih A, Voillet V, Hanafi LA, DeBerg HA, Yajima M, Hawkins R, Gersuk V, Riddell SR, Maloney DG, Wohlfahrt ME, Pande D, Enstrom MR, Kiem HP, Adair JE, Gottardo R, et al. Clonal kinetics and single-cell transcriptional profiling of CAR-T cells in patients undergoing CD19 CAR-T immunotherapy. Nature Communications. 11: 219. PMID 31924795 DOI: 10.1038/S41467-019-13880-1  0.094
2022 Mouri K, Guo MH, de Boer CG, Lissner MM, Harten IA, Newby GA, DeBerg HA, Platt WF, Gentili M, Liu DR, Campbell DJ, Hacohen N, Tewhey R, Ray JP. Prioritization of autoimmune disease-associated genetic variants that perturb regulatory element activity in T cells. Nature Genetics. PMID 35513721 DOI: 10.1038/s41588-022-01056-5  0.088
2017 Cerosaletti K, Barahmand-Pour-Whitman F, Yang J, DeBerg HA, Dufort MJ, Murray SA, Israelsson E, Speake C, Gersuk VH, Eddy JA, Reijonen H, Greenbaum CJ, Kwok WW, Wambre E, Prlic M, et al. Single-Cell RNA Sequencing Reveals Expanded Clones of Islet Antigen-Reactive CD4(+) T Cells in Peripheral Blood of Subjects with Type 1 Diabetes. Journal of Immunology (Baltimore, Md. : 1950). PMID 28566371 DOI: 10.4049/Jimmunol.1700172  0.088
2019 Wiedeman AE, Muir VS, Rosasco MG, DeBerg HA, Presnell S, Haas B, Dufort MJ, Speake C, Greenbaum CJ, Serti E, Nepom GT, Blahnik G, Kus AM, James EA, Linsley PS, et al. Autoreactive CD8+ T cell exhaustion distinguishes subjects with slow type 1 diabetes progression. The Journal of Clinical Investigation. PMID 31815738 DOI: 10.1172/Jci126595  0.085
2023 Balmas E, Chen J, Hu AK, DeBerg HA, Rosasco MG, Gersuk VH, Serti E, Speake C, Greenbaum CJ, Nepom GT, Linsley PS, Cerosaletti K. Proinflammatory islet antigen reactive CD4 T cells are linked with response to alefacept in type 1 diabetes. Jci Insight. PMID 37751304 DOI: 10.1172/jci.insight.167881  0.081
2019 Woodward Davis AS, Roozen HN, Dufort MJ, DeBerg HA, Delaney MA, Mair F, Erickson JR, Slichter CK, Berkson JD, Klock AM, Mack M, Lwo Y, Ko A, Brand RM, McGowan I, et al. The human tissue-resident CCR5 T cell compartment maintains protective and functional properties during inflammation. Science Translational Medicine. 11. PMID 31801887 DOI: 10.1126/Scitranslmed.Aaw8718  0.075
2022 Bajzik V, DeBerg HA, Garabatos N, Rust BJ, Obrien KK, Nguyen QA, O'Rourke C, Smith A, Walker AH, Quinn C, Gersuk VH, Farrington M, Jeong D, Vickery BP, Adelman DC, et al. Oral desensitization therapy for peanut allergy induces dynamic changes in peanut-specific immune responses. Allergy. PMID 35266148 DOI: 10.1111/all.15276  0.075
2023 Morrell ED, Holton SE, Lawrance M, Orlov M, Franklin Z, Mitchem MA, DeBerg H, Gersuk VH, Garay A, Barnes E, Liu T, Peltan ID, Rogers A, Ziegler S, Wurfel MM, et al. The transcriptional and phenotypic characteristics that define alveolar macrophage subsets in acute hypoxemic respiratory failure. Nature Communications. 14: 7443. PMID 37978185 DOI: 10.1038/s41467-023-43223-0  0.061
2020 Rose LM, DeBerg HA, Vishnu P, Frankel JK, Manjunath AB, Flores JPE, Aboulafia DM. Incidence of Skin and Respiratory Immune-Related Adverse Events Correlates With Specific Tumor Types in Patients Treated With Checkpoint Inhibitors. Frontiers in Oncology. 10: 570752. PMID 33520695 DOI: 10.3389/fonc.2020.570752  0.061
2023 Jamison BL, Lawrance M, Wang CJ, DeBerg HA, Sansom DM, Gavin MA, Walker LSK, Campbell DJ. An IL-2 mutein increases IL-10 and CTLA-4-dependent suppression of dendritic cells by regulatory T cells. Biorxiv : the Preprint Server For Biology. PMID 38106196 DOI: 10.1101/2023.12.01.569613  0.059
2020 DeGottardi Q, Gates TJ, Yang J, James EA, Malhotra U, Chow IT, Simoni Y, Fehlings M, Newell EW, DeBerg HA, Kwok WW. Ontogeny of different subsets of yellow fever virus-specific circulatory CXCR5 CD4 T cells after yellow fever vaccination. Scientific Reports. 10: 15686. PMID 32973217 DOI: 10.1038/s41598-020-72610-6  0.058
2023 Calise J, DeBerg H, Garabatos N, Khosa S, Bajzik V, Calderon LB, Aldridge K, Rosasco M, Ferslew BC, Zhu T, Smulders R, Wheatley LM, Laidlaw TM, Qin T, Chichili GR, et al. Distinct trajectories distinguish Antigen-specific T cells in peanut-allergic individuals undergoing oral immunotherapy. The Journal of Allergy and Clinical Immunology. PMID 37003475 DOI: 10.1016/j.jaci.2023.03.020  0.057
2023 Voskamp AL, Khosa S, Phan T, DeBerg HA, Bingham J, Hew M, Smith W, Abramovitch J, Rolland JM, Moyle M, Nadeau KC, Lack G, Larché M, Wambre E, O'Hehir RE, et al. Phase 1 trial supports safety and mechanism of action of peptide immunotherapy for peanut allergy. Allergy. PMID 38112286 DOI: 10.1111/all.15966  0.049
2018 DeBerg HA, Zaidi MB, Altman MC, Khaenam P, Gersuk VH, Campos FD, Perez-Martinez I, Meza-Segura M, Chaussabel D, Banchereau J, Estrada-Garcia T, Linsley PS. Shared and organism-specific host responses to childhood diarrheal diseases revealed by whole blood transcript profiling. Plos One. 13: e0192082. PMID 29377961 DOI: 10.1371/journal.pone.0192082  0.047
2021 Wambre ER, Farrington M, Bajzik V, DeBerg HA, Ruddy M, DeVeaux M, Meier P, Robinson D, Cantor M, Huang C, Orengo JM, Wang CQ, Radin A. Clinical and Immunological Evaluation of Cat-allergic Asthmatics Living With or Without a Cat. Clinical and Experimental Allergy : Journal of the British Society For Allergy and Clinical Immunology. PMID 34599624 DOI: 10.1111/cea.14024  0.037
2023 Ferslew BC, Smulders R, Zhu T, Blauwet MB, Kusawake T, Spence A, Aldridge K, DeBerg HA, Khosa S, Wambre E, Chichili GR. Safety and immunopharmacology of ASP0892 in adults or adolescents with peanut allergy: two randomized trials. Allergy. PMID 38010254 DOI: 10.1111/all.15931  0.037
2021 Frankel JK, Caumont F, DeBerg HA, Flores JP, Porter CR. Contemporary trends in management of stage 1 seminoma. Urologic Oncology. PMID 33602622 DOI: 10.1016/j.urolonc.2020.08.025  0.017
2020 Caumont F, Porter C, DeBerg H, Burns J, Frankel J, Flores JP. Combined chemotherapy and radiotherapy improves survival in 1897 testicular Lymphoma patients from a contemporary cohort. Urologic Oncology. PMID 32307328 DOI: 10.1016/j.urolonc.2020.02.027  0.017
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