| Year |
Citation |
Score |
| 2020 |
Keever MR, Zhang P, Bolt CR, Antonson AM, Rymut HE, Caputo MP, Houser AK, Hernandez AG, Southey BR, Rund LA, Johnson RW, Rodriguez-Zas SL. Lasting and Sex-Dependent Impact of Maternal Immune Activation on Molecular Pathways of the Amygdala. Frontiers in Neuroscience. 14: 774. PMID 32848554 DOI: 10.3389/Fnins.2020.00774 |
0.36 |
|
| 2020 |
Pinedo P, Santos JEP, Chebel RC, Galvão KN, Schuenemann GM, Bicalho RC, Gilbert RO, Rodriguez-Zas SL, Seabury CM, Rosa G, Thatcher W. Associations of reproductive indices with fertility outcomes, milk yield, and survival in Holstein cows. Journal of Dairy Science. PMID 32359989 DOI: 10.3168/Jds.2019-17867 |
0.324 |
|
| 2020 |
Southey BR, Rodriguez-Zas SL, Rhodes JS, Sweedler JV. Characterization of the prohormone complement in Amphiprion and related fish species integrating genome and transcriptome assemblies. Plos One. 15: e0228562. PMID 32163422 DOI: 10.1371/Journal.Pone.0228562 |
0.36 |
|
| 2019 |
Zhang P, Moye LS, Southey BR, Dripps I, Sweedler JV, Pradhan A, Rodriguez-Zas SL. Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens. Molecular Neurobiology. PMID 31129808 DOI: 10.1007/S12035-019-01650-5 |
0.33 |
|
| 2019 |
Ko Y, Kim J, Rodriguez-Zas SL. Markov chain Monte Carlo simulation of a Bayesian mixture model for gene network inference. Genes & Genomics. PMID 30741379 DOI: 10.1007/S13258-019-00789-8 |
0.383 |
|
| 2018 |
Jeong H, Moye LS, Southey BR, Hernandez AG, Dripps I, Romanova EV, Rubakhin SS, Sweedler JV, Pradhan AA, Rodriguez-Zas SL. Gene Network Dysregulation in the Trigeminal Ganglia and Nucleus Accumbens of a Model of Chronic Migraine-Associated Hyperalgesia. Frontiers in Systems Neuroscience. 12: 63. PMID 30618656 DOI: 10.3389/Fnsys.2018.00063 |
0.327 |
|
| 2018 |
Goncalves TM, Southey BR, Rodriguez-Zas SL. Interplay Between Amphetamine and Activity Level in Gene Networks of the Mouse Striatum. Bioinformatics and Biology Insights. 12: 1177932218815152. PMID 30559594 DOI: 10.1177/1177932218815152 |
0.36 |
|
| 2018 |
Sorokina AM, Saul M, Goncalves TM, Gogola JV, Majdak P, Rodriguez-Zas SL, Rhodes JS. Striatal transcriptome of a mouse model of ADHD reveals a pattern of synaptic remodeling. Plos One. 13: e0201553. PMID 30110355 DOI: 10.1371/Journal.Pone.0201553 |
0.311 |
|
| 2018 |
Zhang P, Rhodes JS, Garland T, Perez SD, Southey BR, Rodriguez-Zas SL. Brain region-dependent gene networks associated with selective breeding for increased voluntary wheel-running behavior. Plos One. 13: e0201773. PMID 30071007 DOI: 10.1371/Journal.Pone.0201773 |
0.372 |
|
| 2017 |
Agrawal A, Khan MJ, Graugnard DE, Vailati-Riboni M, Rodriguez-Zas SL, Osorio JS, Loor JJ. Prepartal Energy Intake Alters Blood Polymorphonuclear Leukocyte Transcriptome During the Peripartal Period in Holstein Cows. Bioinformatics and Biology Insights. 11: 1177932217704667. PMID 28579762 DOI: 10.1177/1177932217704667 |
0.318 |
|
| 2016 |
Caetano-Anollés K, Rhodes JS, Garland T, Perez SD, Hernandez AG, Southey BR, Rodriguez-Zas SL. Cerebellum Transcriptome of Mice Bred for High Voluntary Activity Offers Insights into Locomotor Control and Reward-Dependent Behaviors. Plos One. 11: e0167095. PMID 27893846 DOI: 10.1371/Journal.Pone.0167095 |
0.387 |
|
| 2016 |
Gonzalez-Pena D, Nixon SE, Southey BR, Lawson MA, McCusker RH, Hernandez AG, Dantzer R, Kelley KW, Rodriguez-Zas SL. Differential Transcriptome Networks between IDO1-Knockout and Wild-Type Mice in Brain Microglia and Macrophages. Plos One. 11: e0157727. PMID 27314674 DOI: 10.1371/Journal.Pone.0157727 |
0.323 |
|
| 2016 |
Gonzalez-Pena D, Nixon SE, O'Connor JC, Southey BR, Lawson MA, McCusker RH, Borras T, Machuca D, Hernandez AG, Dantzer R, Kelley KW, Rodriguez-Zas SL. Microglia Transcriptome Changes in a Model of Depressive Behavior after Immune Challenge. Plos One. 11: e0150858. PMID 26959683 DOI: 10.1371/Journal.Pone.0150858 |
0.343 |
|
| 2016 |
Seo M, Caetano-Anolles K, Rodriguez-Zas S, Ka S, Jeong JY, Park S, Kim MJ, Nho WG, Cho S, Kim H, Lee HJ. Comprehensive identification of sexually dimorphic genes in diverse cattle tissues using RNA-seq. Bmc Genomics. 17: 81. PMID 26818975 DOI: 10.1186/S12864-016-2400-4 |
0.326 |
|
| 2016 |
Southey BR, Zhu P, Carr-Markell MK, Liang ZS, Zayed A, Li R, Robinson GE, Rodriguez-Zas SL. Characterization of Genomic Variants Associated with Scout and Recruit Behavioral Castes in Honey Bees Using Whole-Genome Sequencing. Plos One. 11: e0146430. PMID 26784945 DOI: 10.1371/Journal.Pone.0146430 |
0.356 |
|
| 2015 |
Wheeler MM, Ament SA, Rodriguez-Zas SL, Southey B, Robinson GE. Diet and endocrine effects on behavioral maturation-related gene expression in the pars intercerebralis of the honey bee brain. The Journal of Experimental Biology. PMID 26567353 DOI: 10.1242/Jeb.119420 |
0.343 |
|
| 2015 |
Caetano-Anolles K, Seo M, Rodriguez-Zas S, Oh JD, Han JY, Lee K, Park TS, Shin S, Jiao Jiao Z, Ghosh M, Jeong DK, Cho S, Kim H, Song KD, Lee HK. Comprehensive Identification of Sexual Dimorphism-Associated Differentially Expressed Genes in Two-Way Factorial Designed RNA-Seq Data on Japanese Quail (Coturnix coturnix japonica). Plos One. 10: e0139324. PMID 26418419 DOI: 10.1371/Journal.Pone.0139324 |
0.405 |
|
| 2015 |
Moisá SJ, Shike DW, Shoup L, Rodriguez-Zas SL, Loor JJ. Maternal Plane of Nutrition during Late Gestation and Weaning Age Alter Angus × Simmental Offspring Longissimus Muscle Transcriptome and Intramuscular Fat. Plos One. 10: e0131478. PMID 26153887 DOI: 10.1371/Journal.Pone.0131478 |
0.32 |
|
| 2015 |
Shahzad K, Akbar H, Vailati-Riboni M, Basiricò L, Morera P, Rodriguez-Zas SL, Nardone A, Bernabucci U, Loor JJ. The effect of calving in the summer on the hepatic transcriptome of Holstein cows during the peripartal period. Journal of Dairy Science. 98: 5401-13. PMID 26074246 DOI: 10.3168/Jds.2015-9409 |
0.387 |
|
| 2015 |
Daigneault BW, McNamara KA, Purdy PH, Krisher RL, Knox RV, Rodriguez-Zas SL, Miller DJ. Enhanced fertility prediction of cryopreserved boar spermatozoa using novel sperm function assessment. Andrology. 3: 558-68. PMID 25914302 DOI: 10.1111/Andr.12035 |
0.303 |
|
| 2015 |
Caetano-Anollés K, Mishra S, Rodriguez-Zas SL. Synergistic and antagonistic interplay between myostatin gene expression and physical activity levels on gene expression patterns in triceps Brachii muscles of C57/BL6 mice. Plos One. 10: e0116828. PMID 25710176 DOI: 10.1371/Journal.Pone.0116828 |
0.376 |
|
| 2015 |
Nixon SE, González-Peña D, Lawson MA, McCusker RH, Hernandez AG, O'Connor JC, Dantzer R, Kelley KW, Rodriguez-Zas SL. Analytical workflow profiling gene expression in murine macrophages. Journal of Bioinformatics and Computational Biology. 13: 1550010. PMID 25708305 DOI: 10.1142/S0219720015500109 |
0.391 |
|
| 2014 |
Liang ZS, Mattila HR, Rodriguez-Zas SL, Southey BR, Seeley TD, Robinson GE. Comparative brain transcriptomic analyses of scouting across distinct behavioural and ecological contexts in honeybees. Proceedings. Biological Sciences / the Royal Society. 281. PMID 25355476 DOI: 10.1098/Rspb.2014.1868 |
0.37 |
|
| 2014 |
Shahzad K, Bionaz M, Trevisi E, Bertoni G, Rodriguez-Zas SL, Loor JJ. Integrative analyses of hepatic differentially expressed genes and blood biomarkers during the peripartal period between dairy cows overfed or restricted-fed energy prepartum. Plos One. 9: e99757. PMID 24914544 DOI: 10.1371/Journal.Pone.0099757 |
0.342 |
|
| 2014 |
Naeem A, Drackley JK, Lanier JS, Everts RE, Rodriguez-Zas SL, Loor JJ. Ruminal epithelium transcriptome dynamics in response to plane of nutrition and age in young Holstein calves. Functional & Integrative Genomics. 14: 261-73. PMID 24318765 DOI: 10.1007/S10142-013-0351-2 |
0.355 |
|
| 2014 |
Marjani SL, Carter MG, Sung L, Inoue K, Rodriguez-Zas S, Wang L, Yu H, Shen H, Cheng T, Yang X, Tian XC. 42 EFFECTS OF TRICHOSTATIN A TREATMENT ON GENE EXPRESSION OF CLONED MOUSE 2-CELL AND BLASTOCYST STAGE EMBRYOS Reproduction, Fertility and Development. 26: 135. DOI: 10.1071/Rdv26N1Ab42 |
0.347 |
|
| 2013 |
Serão NVL, González-Peña D, Beever JE, Bollero GA, Southey BR, Faulkner DB, Rodriguez-Zas SL. Bivariate genome-wide association analysis of the growth and intake components of feed efficiency Plos One. 8: e78530. PMID 24205251 DOI: 10.1371/Journal.Pone.0078530 |
0.302 |
|
| 2013 |
Serão NV, González-Peña D, Beever JE, Faulkner DB, Southey BR, Rodriguez-Zas SL. Single nucleotide polymorphisms and haplotypes associated with feed efficiency in beef cattle. Bmc Genetics. 14: 94. PMID 24066663 DOI: 10.1186/1471-2156-14-94 |
0.304 |
|
| 2013 |
Moisá SJ, Shike DW, Graugnard DE, Rodriguez-Zas SL, Everts RE, Lewin HA, Faulkner DB, Berger LL, Loor JJ. Bioinformatics analysis of transcriptome dynamics during growth in angus cattle longissimus muscle. Bioinformatics and Biology Insights. 7: 253-70. PMID 23943656 DOI: 10.4137/Bbi.S12328 |
0.313 |
|
| 2013 |
Zhao W, Shahzad K, Jiang M, Graugnard DE, Rodriguez-Zas SL, Luo J, Loor JJ, Hurley WL. Bioinformatics and Gene Network Analyses of the Swine Mammary Gland Transcriptome during Late Gestation. Bioinformatics and Biology Insights. 7: 193-216. PMID 23908586 DOI: 10.4137/Bbi.S12205 |
0.347 |
|
| 2013 |
Wheeler MM, Ament SA, Rodriguez-Zas SL, Robinson GE. Brain gene expression changes elicited by peripheral vitellogenin knockdown in the honey bee. Insect Molecular Biology. 22: 562-73. PMID 23889463 DOI: 10.1111/Imb.12043 |
0.398 |
|
| 2013 |
Delfino KR, Rodriguez-Zas SL. Transcription factor-microRNA-target gene networks associated with ovarian cancer survival and recurrence. Plos One. 8: e58608. PMID 23554906 DOI: 10.1371/Journal.Pone.0058608 |
0.615 |
|
| 2013 |
Akbar H, Bionaz M, Carlson DB, Rodriguez-Zas SL, Everts RE, Lewin HA, Drackley JK, Loor JJ. Feed restriction, but not l-carnitine infusion, alters the liver transcriptome by inhibiting sterol synthesis and mitochondrial oxidative phosphorylation and increasing gluconeogenesis in mid-lactation dairy cows. Journal of Dairy Science. 96: 2201-13. PMID 23462174 DOI: 10.3168/Jds.2012-6036 |
0.349 |
|
| 2012 |
Sadeque A, Serão NV, Southey BR, Delfino KR, Rodriguez-Zas SL. Identification and characterization of alternative exon usage linked glioblastoma multiforme survival. Bmc Medical Genomics. 5: 59. PMID 23206951 DOI: 10.1186/1755-8794-5-59 |
0.679 |
|
| 2012 |
Porter KI, Southey BR, Sweedler JV, Rodriguez-Zas SL. First survey and functional annotation of prohormone and convertase genes in the pig. Bmc Genomics. 13: 582. PMID 23153308 DOI: 10.1186/1471-2164-13-582 |
0.401 |
|
| 2012 |
Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, ... ... Rodriguez-Zas S, et al. Analyses of pig genomes provide insight into porcine demography and evolution. Nature. 491: 393-8. PMID 23151582 DOI: 10.1038/Nature11622 |
0.342 |
|
| 2012 |
Ament SA, Blatti CA, Alaux C, Wheeler MM, Toth AL, Le Conte Y, Hunt GJ, Guzmán-Novoa E, Degrandi-Hoffman G, Uribe-Rubio JL, Amdam GV, Page RE, Rodriguez-Zas SL, Robinson GE, Sinha S. New meta-analysis tools reveal common transcriptional regulatory basis for multiple determinants of behavior. Proceedings of the National Academy of Sciences of the United States of America. 109: E1801-10. PMID 22691501 DOI: 10.1073/Pnas.1205283109 |
0.35 |
|
| 2012 |
Piantoni P, Daniels KM, Everts RE, Rodriguez-Zas SL, Lewin HA, Hurley WL, Akers RM, Loor JJ. Level of nutrient intake affects mammary gland gene expression profiles in preweaned Holstein heifers. Journal of Dairy Science. 95: 2550-61. PMID 22541482 DOI: 10.3168/Jds.2011-4539 |
0.369 |
|
| 2012 |
Ament SA, Wang Y, Chen CC, Blatti CA, Hong F, Liang ZS, Negre N, White KP, Rodriguez-Zas SL, Mizzen CA, Sinha S, Zhong S, Robinson GE. The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expression. Plos Genetics. 8: e1002596. PMID 22479195 DOI: 10.1371/Journal.Pgen.1002596 |
0.375 |
|
| 2012 |
Bionaz M, Periasamy K, Rodriguez-Zas SL, Hurley WL, Loor JJ. A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptome. Plos One. 7: e32455. PMID 22438877 DOI: 10.1371/Journal.Pone.0032455 |
0.373 |
|
| 2012 |
Bionaz M, Periasamy K, Rodriguez-Zas SL, Everts RE, Lewin HA, Hurley WL, Loor JJ. Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle. Plos One. 7: e33268. PMID 22428004 DOI: 10.1371/Journal.Pone.0033268 |
0.355 |
|
| 2012 |
Monaco E, Bionaz M, Rodriguez-Zas S, Hurley WL, Wheeler MB. Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation Plos One. 7. PMID 22412878 DOI: 10.1371/Journal.Pone.0032481 |
0.326 |
|
| 2012 |
Liang ZS, Nguyen T, Mattila HR, Rodriguez-Zas SL, Seeley TD, Robinson GE. Molecular determinants of scouting behavior in honey bees. Science (New York, N.Y.). 335: 1225-8. PMID 22403390 DOI: 10.1126/Science.1213962 |
0.304 |
|
| 2012 |
Chen K, Hawken R, Flickinger GH, Rodriguez-Zas SL, Rund LA, Wheeler MB, Abrahamsen M, Rutherford MS, Beever JE, Schook LB. Association of the porcine transforming growth factor beta type I receptor (TGFBR1) gene with growth and carcass traits. Animal Biotechnology. 23: 43-63. PMID 22292700 DOI: 10.1080/10495398.2011.630897 |
0.306 |
|
| 2012 |
Zayed A, Naeger NL, Rodriguez-Zas SL, Robinson GE. Common and novel transcriptional routes to behavioral maturation in worker and male honey bees. Genes, Brain, and Behavior. 11: 253-61. PMID 22050787 DOI: 10.1111/J.1601-183X.2011.00750.X |
0.326 |
|
| 2012 |
Lutz CC, Rodriguez-Zas SL, Fahrbach SE, Robinson GE. Transcriptional response to foraging experience in the honey bee mushroom bodies. Developmental Neurobiology. 72: 153-66. PMID 21634017 DOI: 10.1002/Dneu.20929 |
0.358 |
|
| 2011 |
Ament SA, Chan QW, Wheeler MM, Nixon SE, Johnson SP, Rodriguez-Zas SL, Foster LJ, Robinson GE. Mechanisms of stable lipid loss in a social insect. The Journal of Experimental Biology. 214: 3808-21. PMID 22031746 DOI: 10.1242/Jeb.060244 |
0.338 |
|
| 2011 |
Chandrasekaran S, Ament SA, Eddy JA, Rodriguez-Zas SL, Schatz BR, Price ND, Robinson GE. Behavior-specific changes in transcriptional modules lead to distinct and predictable neurogenomic states. Proceedings of the National Academy of Sciences of the United States of America. 108: 18020-5. PMID 21960440 DOI: 10.1073/Pnas.1114093108 |
0.34 |
|
| 2011 |
Cohen-Zinder M, Donthu R, Larkin DM, Kumar CG, Rodriguez-Zas SL, Andropolis KE, Oliveira R, Lewin HA. Multisite haplotype on cattle chromosome 3 is associated with quantitative trait locus effects on lactation traits. Physiological Genomics. 43: 1185-97. PMID 21896633 DOI: 10.1152/Physiolgenomics.00253.2010 |
0.304 |
|
| 2011 |
Kohman RA, Rodriguez-Zas SL, Southey BR, Kelley KW, Dantzer R, Rhodes JS. Voluntary wheel running reverses age-induced changes in hippocampal gene expression. Plos One. 6: e22654. PMID 21857943 DOI: 10.1371/Journal.Pone.0022654 |
0.321 |
|
| 2011 |
Delfino KR, Serão NV, Southey BR, Rodriguez-Zas SL. Therapy-, gender- and race-specific microRNA markers, target genes and networks related to glioblastoma recurrence and survival. Cancer Genomics & Proteomics. 8: 173-83. PMID 21737610 |
0.582 |
|
| 2011 |
Serão NV, Delfino KR, Southey BR, Beever JE, Rodriguez-Zas SL. Cell cycle and aging, morphogenesis, and response to stimuli genes are individualized biomarkers of glioblastoma progression and survival. Bmc Medical Genomics. 4: 49. PMID 21649900 DOI: 10.1186/1755-8794-4-49 |
0.66 |
|
| 2011 |
Naeger NL, Van Nest BN, Johnson JN, Boyd SD, Southey BR, Rodriguez-Zas SL, Moore D, Robinson GE. Neurogenomic signatures of spatiotemporal memories in time-trained forager honey bees. The Journal of Experimental Biology. 214: 979-87. PMID 21346126 DOI: 10.1242/Jeb.053421 |
0.327 |
|
| 2011 |
Adams HA, Southey BR, Everts RE, Marjani SL, Tian CX, Lewin HA, Rodriguez-Zas SL. Transferase activity function and system development process are critical in cattle embryo development. Functional & Integrative Genomics. 11: 139-50. PMID 20844914 DOI: 10.1007/S10142-010-0189-9 |
0.598 |
|
| 2011 |
Moyes KM, Drackley JK, Morin DE, Rodriguez-Zas SL, Everts RE, Lewin HA, Loor JJ. Predisposition of cows to mastitis in non-infected mammary glands: effects of dietary-induced negative energy balance during mid-lactation on immune-related genes. Functional & Integrative Genomics. 11: 151-6. PMID 20809086 DOI: 10.1007/S10142-010-0186-Z |
0.372 |
|
| 2011 |
Delfino KR, Rodriguez-Zas SL. Integration of statistical models and visualization tools to characterize microRNA networks influencing cancer 2011 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2011. 969-971. DOI: 10.1109/BIBMW.2011.6112523 |
0.552 |
|
| 2011 |
Southey B, Porter K, Delfino K, Sweedler J, Rodriguez-Zas S. Relationship between neuropeptide gene expression and drug abuse using meta-analysis Brain, Behavior, and Immunity. 25: S208. DOI: 10.1016/J.Bbi.2011.07.105 |
0.628 |
|
| 2011 |
Delfino K, Serão N, Southey B, Rodriguez-Zas S. 98. MicroRNAs and target genes offer insights into the relationship between cancer and neuroimmune pathways Brain, Behavior, and Immunity. 25: S207. DOI: 10.1016/J.Bbi.2011.07.101 |
0.626 |
|
| 2010 |
Ko Y, Zhai C, Rodriguez-Zas SL. Discovery of gene network variability across samples representing multiple classes. International Journal of Bioinformatics Research and Applications. 6: 402-17. PMID 20940126 DOI: 10.1504/Ijbra.2010.036002 |
0.369 |
|
| 2010 |
Sen Sarma M, Rodriguez-Zas SL, Gernat T, Nguyen T, Newman T, Robinson GE. Distance-responsive genes found in dancing honey bees. Genes, Brain, and Behavior. 9: 825-30. PMID 20618450 DOI: 10.1111/J.1601-183X.2010.00622.X |
0.35 |
|
| 2010 |
Piantoni P, Bionaz M, Graugnard DE, Daniels KM, Everts RE, Rodriguez-Zas SL, Lewin HA, Hurley HL, Akers M, Loor JJ. Functional and gene network analyses of transcriptional signatures characterizing pre-weaned bovine mammary parenchyma or fat pad uncovered novel inter-tissue signaling networks during development. Bmc Genomics. 11: 331. PMID 20504330 DOI: 10.1186/1471-2164-11-331 |
0.353 |
|
| 2010 |
Toth AL, Varala K, Henshaw MT, Rodriguez-Zas SL, Hudson ME, Robinson GE. Brain transcriptomic analysis in paper wasps identifies genes associated with behaviour across social insect lineages. Proceedings. Biological Sciences / the Royal Society. 277: 2139-48. PMID 20236980 DOI: 10.1098/Rspb.2010.0090 |
0.414 |
|
| 2010 |
Moyes KM, Drackley JK, Morin DE, Rodriguez-Zas SL, Everts RE, Lewin HA, Loor JJ. Mammary gene expression profiles during an intramammary challenge reveal potential mechanisms linking negative energy balance with impaired immune response. Physiological Genomics. 41: 161-70. PMID 20103698 DOI: 10.1152/Physiolgenomics.00197.2009 |
0.375 |
|
| 2010 |
Soria-Guerra RE, Rosales-Mendoza S, Chang S, Haudenshield JS, Padmanaban A, Rodriguez-Zas S, Hartman GL, Ghabrial SA, Korban SS. Transcriptome analysis of resistant and susceptible genotypes of Glycine tomentella during Phakopsora pachyrhizi infection reveals novel rust resistance genes. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 1315-33. PMID 20058146 DOI: 10.1007/S00122-009-1258-0 |
0.371 |
|
| 2010 |
Delfino KR, Southey BR, Sweedler JV, Rodriguez-Zas SL. Genome-wide census and expression profiling of chicken neuropeptide and prohormone convertase genes. Neuropeptides. 44: 31-44. PMID 20006904 DOI: 10.1016/J.Npep.2009.11.002 |
0.676 |
|
| 2009 |
Moyes KM, Drackley JK, Morin DE, Bionaz M, Rodriguez-Zas SL, Everts RE, Lewin HA, Loor JJ. Gene network and pathway analysis of bovine mammary tissue challenged with Streptococcus uberis reveals induction of cell proliferation and inhibition of PPARgamma signaling as potential mechanism for the negative relationships between immune response and lipid metabolism. Bmc Genomics. 10: 542. PMID 19925655 DOI: 10.1186/1471-2164-10-542 |
0.325 |
|
| 2009 |
Alaux C, Sinha S, Hasadsri L, Hunt GJ, Guzmán-Novoa E, DeGrandi-Hoffman G, Uribe-Rubio JL, Southey BR, Rodriguez-Zas S, Robinson GE. Honey bee aggression supports a link between gene regulation and behavioral evolution. Proceedings of the National Academy of Sciences of the United States of America. 106: 15400-5. PMID 19706434 DOI: 10.1073/Pnas.0907043106 |
0.404 |
|
| 2009 |
Alaux C, Duong N, Schneider SS, Southey BR, Rodriguez-Zas S, Robinson GE. Modulatory communication signal performance is associated with a distinct neurogenomic state in honey bees. Plos One. 4: e6694. PMID 19693278 DOI: 10.1371/Journal.Pone.0006694 |
0.308 |
|
| 2009 |
Sen Sarma M, Rodriguez-Zas SL, Hong F, Zhong S, Robinson GE. Transcriptomic profiling of central nervous system regions in three species of honey bee during dance communication behavior. Plos One. 4: e6408. PMID 19641619 DOI: 10.1371/Journal.Pone.0006408 |
0.363 |
|
| 2009 |
Ayroles JF, Hughes KA, Rowe KC, Reedy MM, Rodriguez-Zas SL, Drnevich JM, Cáceres CE, Paige KN. A genomewide assessment of inbreeding depression: gene number, function, and mode of action. Conservation Biology : the Journal of the Society For Conservation Biology. 23: 920-30. PMID 19627320 DOI: 10.1111/J.1523-1739.2009.01186.X |
0.353 |
|
| 2009 |
Dong S, Replogle KL, Hasadsri L, Imai BS, Yau PM, Rodriguez-Zas S, Southey BR, Sweedler JV, Clayton DF. Discrete molecular states in the brain accompany changing responses to a vocal signal. Proceedings of the National Academy of Sciences of the United States of America. 106: 11364-9. PMID 19541599 DOI: 10.1073/Pnas.0812998106 |
0.337 |
|
| 2009 |
Ko Y, Zhai C, Rodriguez-Zas S. Inference of gene pathways using mixture Bayesian networks. Bmc Systems Biology. 3: 54. PMID 19454027 DOI: 10.1186/1752-0509-3-54 |
0.349 |
|
| 2009 |
Southey BR, Rodriguez-Zas SL, Sweedler JV. Characterization of the prohormone complement in cattle using genomic libraries and cleavage prediction approaches. Bmc Genomics. 10: 228. PMID 19445702 DOI: 10.1186/1471-2164-10-228 |
0.364 |
|
| 2009 |
Elsik CG, Tellam RL, Worley KC, Gibbs RA, Muzny DM, Weinstock GM, Adelson DL, Eichler EE, Elnitski L, Guigó R, Hamernik DL, Kappes SM, Lewin HA, Lynn DJ, ... ... Rodriguez-Zas SL, et al. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (New York, N.Y.). 324: 522-8. PMID 19390049 DOI: 10.1126/Science.1169588 |
0.34 |
|
| 2009 |
Alaux C, Le Conte Y, Adams HA, Rodriguez-Zas S, Grozinger CM, Sinha S, Robinson GE. Regulation of brain gene expression in honey bees by brood pheromone. Genes, Brain, and Behavior. 8: 309-19. PMID 19220482 DOI: 10.1111/J.1601-183X.2009.00480.X |
0.595 |
|
| 2009 |
Marjani SL, Le Bourhis D, Vignon X, Heyman Y, Everts RE, Rodriguez-Zas SL, Lewin HA, Renard JP, Yang X, Tian XC. Embryonic gene expression profiling using microarray analysis. Reproduction, Fertility, and Development. 21: 22-30. PMID 19152742 DOI: 10.1071/Rd08217 |
0.371 |
|
| 2009 |
Smith SL, Everts RE, Sung LY, Du F, Page RL, Henderson B, Rodriguez-Zas SL, Nedambale TL, Renard JP, Lewin HA, Yang X, Tian XC. Gene expression profiling of single bovine embryos uncovers significant effects of in vitro maturation, fertilization and culture. Molecular Reproduction and Development. 76: 38-47. PMID 18449896 DOI: 10.1002/Mrd.20927 |
0.368 |
|
| 2008 |
Southey BR, Sweedler JV, Rodriguez-Zas SL. A python analytical pipeline to identify prohormone precursors and predict prohormone cleavage sites. Frontiers in Neuroinformatics. 2: 7. PMID 19169350 DOI: 10.3389/Neuro.11.007.2008 |
0.318 |
|
| 2008 |
Adams HA, Southey BR, Robinson GE, Rodriguez-Zas SL. Meta-analysis of genome-wide expression patterns associated with behavioral maturation in honey bees. Bmc Genomics. 9: 503. PMID 18950506 DOI: 10.1186/1471-2164-9-503 |
0.629 |
|
| 2008 |
Replogle K, Arnold AP, Ball GF, Band M, Bensch S, Brenowitz EA, Dong S, Drnevich J, Ferris M, George JM, Gong G, Hasselquist D, Hernandez AG, Kim R, Lewin HA, ... ... Rodriguez-Zas S, et al. The Songbird Neurogenomics (SoNG) Initiative: community-based tools and strategies for study of brain gene function and evolution. Bmc Genomics. 9: 131. PMID 18366674 DOI: 10.1186/1471-2164-9-131 |
0.342 |
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| 2008 |
Southey BR, Sweedler JV, Rodriguez-Zas SL. Prediction of neuropeptide cleavage sites in insects. Bioinformatics (Oxford, England). 24: 815-25. PMID 18252740 DOI: 10.1093/Bioinformatics/Btn044 |
0.326 |
|
| 2008 |
Rodriguez-Zas SL, Ko Y, Adams HA, Southey BR. Advancing the understanding of the embryo transcriptome co-regulation using meta-, functional, and gene network analysis tools. Reproduction (Cambridge, England). 135: 213-24. PMID 18239050 DOI: 10.1530/Rep-07-0391 |
0.623 |
|
| 2008 |
Rodriguez-Zas SL, Schellander K, Lewin HA. Biological interpretations of transcriptomic profiles in mammalian oocytes and embryos. Reproduction (Cambridge, England). 135: 129-39. PMID 18239044 DOI: 10.1530/Rep-07-0426 |
0.415 |
|
| 2008 |
Everts RE, Chavatte-Palmer P, Razzak A, Hue I, Green CA, Oliveira R, Vignon X, Rodriguez-Zas SL, Tian XC, Yang X, Renard JP, Lewin HA. Aberrant gene expression patterns in placentomes are associated with phenotypically normal and abnormal cattle cloned by somatic cell nuclear transfer. Physiological Genomics. 33: 65-77. PMID 18089771 DOI: 10.1152/Physiolgenomics.00223.2007 |
0.421 |
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| 2007 |
Loor JJ, Everts RE, Bionaz M, Dann HM, Morin DE, Oliveira R, Rodriguez-Zas SL, Drackley JK, Lewin HA. Nutrition-induced ketosis alters metabolic and signaling gene networks in liver of periparturient dairy cows. Physiological Genomics. 32: 105-16. PMID 17925483 DOI: 10.1152/Physiolgenomics.00188.2007 |
0.367 |
|
| 2007 |
Yeater KM, Chandra J, Cheng G, Mukherjee PK, Zhao X, Rodriguez-Zas SL, Kwast KE, Ghannoum MA, Hoyer LL. Temporal analysis of Candida albicans gene expression during biofilm development. Microbiology (Reading, England). 153: 2373-85. PMID 17660402 DOI: 10.1099/Mic.0.2007/006163-0 |
0.369 |
|
| 2006 |
Whitfield CW, Ben-Shahar Y, Brillet C, Leoncini I, Crauser D, Leconte Y, Rodriguez-Zas S, Robinson GE. Genomic dissection of behavioral maturation in the honey bee. Proceedings of the National Academy of Sciences of the United States of America. 103: 16068-75. PMID 17065327 DOI: 10.1073/Pnas.0606909103 |
0.384 |
|
| 2006 |
Rodriguez-Zas SL, Southey BR, Whitfield CW, Robinson GE. Semiparametric approach to characterize unique gene expression trajectories across time. Bmc Genomics. 7: 233. PMID 16970825 DOI: 10.1186/1471-2164-7-233 |
0.392 |
|
| 2006 |
Southey BR, Amare A, Zimmerman TA, Rodriguez-Zas SL, Sweedler JV. NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptides. Nucleic Acids Research. 34: W267-72. PMID 16845008 DOI: 10.1093/Nar/Gkl161 |
0.672 |
|
| 2006 |
Loor JJ, Dann HM, Guretzky NA, Everts RE, Oliveira R, Green CA, Litherland NB, Rodriguez-Zas SL, Lewin HA, Drackley JK. Plane of nutrition prepartum alters hepatic gene expression and function in dairy cows as assessed by longitudinal transcript and metabolic profiling. Physiological Genomics. 27: 29-41. PMID 16757553 DOI: 10.1152/Physiolgenomics.00036.2006 |
0.338 |
|
| 2006 |
Amare A, Hummon AB, Southey BR, Zimmerman TA, Rodriguez-Zas SL, Sweedler JV. Bridging neuropeptidomics and genomics with bioinformatics: Prediction of mammalian neuropeptide prohormone processing. Journal of Proteome Research. 5: 1162-7. PMID 16674105 DOI: 10.1021/Pr0504541 |
0.683 |
|
| 2006 |
Southey BR, Rodriguez-Zas SL, Sweedler JV. Prediction of neuropeptide prohormone cleavages with application to RFamides. Peptides. 27: 1087-98. PMID 16494967 DOI: 10.1016/J.Peptides.2005.07.026 |
0.306 |
|
| 2006 |
Smith SL, Sung L, Page R, Henderson B, Du F, Everts RE, Nedambale T, Rodriguez-Zas S, Renard J, Lewin HA, Yang X, Tian XC. 6 EXPRESSION PROFILING OF SINGLE BOVINE EMBRYOS REVEALS SIGNIFICANT EFFECTS OF IN VITRO MATURATION, FERTILIZATION AND CULTURE Reproduction, Fertility and Development. 18: 111. DOI: 10.1071/Rdv18N2Ab6 |
0.357 |
|
| 2005 |
Zou J, Rodriguez-Zas S, Aldea M, Li M, Zhu J, Gonzalez DO, Vodkin LO, DeLucia E, Clough SJ. Expression profiling soybean response to Pseudomonas syringae reveals new defense-related genes and rapid HR-specific downregulation of photosynthesis. Molecular Plant-Microbe Interactions : Mpmi. 18: 1161-74. PMID 16353551 DOI: 10.1094/Mpmi-18-1161 |
0.353 |
|
| 2005 |
Smith SL, Everts RE, Tian XC, Du F, Sung LY, Rodriguez-Zas SL, Jeong BS, Renard JP, Lewin HA, Yang X. Global gene expression profiles reveal significant nuclear reprogramming by the blastocyst stage after cloning. Proceedings of the National Academy of Sciences of the United States of America. 102: 17582-7. PMID 16314565 DOI: 10.1073/Pnas.0508952102 |
0.368 |
|
| 2005 |
Stearns TM, Beever JE, Southey BR, Ellis M, McKeith FK, Rodriguez-Zas SL. Evaluation of approaches to detect quantitative trait loci for growth, carcass, and meat quality on swine chromosomes 2, 6, 13, and 18. II. Multivariate and principal component analyses. Journal of Animal Science. 83: 2471-81. PMID 16230643 DOI: 10.2527/2005.83112471X |
0.318 |
|
| 2005 |
Loor JJ, Dann HM, Everts RE, Oliveira R, Green CA, Guretzky NA, Rodriguez-Zas SL, Lewin HA, Drackley JK. Temporal gene expression profiling of liver from periparturient dairy cows reveals complex adaptive mechanisms in hepatic function. Physiological Genomics. 23: 217-26. PMID 16091418 DOI: 10.1152/Physiolgenomics.00132.2005 |
0.365 |
|
| 2004 |
Drnevich JM, Reedy MM, Ruedi EA, Rodriguez-Zas S, Hughes KA. Quantitative evolutionary genomics: differential gene expression and male reproductive success in Drosophila melanogaster. Proceedings. Biological Sciences / the Royal Society. 271: 2267-73. PMID 15539352 DOI: 10.1098/Rspb.2004.2880 |
0.401 |
|
| 2002 |
Chesler EJ, Wilson SG, Lariviere WR, Rodriguez-Zas SL, Mogil JS. Identification and ranking of genetic and laboratory environment factors influencing a behavioral trait, thermal nociception, via computational analysis of a large data archive. Neuroscience and Biobehavioral Reviews. 26: 907-23. PMID 12667496 DOI: 10.1016/S0149-7634(02)00103-3 |
0.311 |
|
| 2002 |
Rodriguez-Zas SL, Southey BR, Heyen DW, Lewin HA. Detection of quantitative trait loci influencing dairy traits using a model for longitudinal data. Journal of Dairy Science. 85: 2681-91. PMID 12416823 DOI: 10.3168/Jds.S0022-0302(02)74354-3 |
0.304 |
|
| 2002 |
Wilson SG, Chesler EJ, Hain H, Rankin AJ, Schwarz JZ, Call SB, Murray MR, West EE, Teuscher C, Rodriguez-Zas S, Belknap JK, Mogil JS. Identification of quantitative trait loci for chemical/inflammatory nociception in mice. Pain. 96: 385-91. PMID 11973013 DOI: 10.1016/S0304-3959(01)00489-4 |
0.319 |
|
| 2001 |
Rodriguez-Zas SL, Southey BR. Analysis of nucleotide sequence data using mixed model methodology Genetic Epidemiology. 21: S638-S642. PMID 11793753 DOI: 10.1002/Gepi.2001.21.S1.S638 |
0.352 |
|
| 2000 |
Rodriguez-Zas SL, Gianola D, Shook GE. An approximate Bayesian analysis of somatic cell score curves in Holsteins Acta Agriculturae Scandinavica - Section a: Animal Science. 50: 291-299. DOI: 10.1080/090647000750069485 |
0.489 |
|
| 2000 |
Rodriguez-Zas SL, Gianola D, Shook GE. Evaluation of models for somatic cell score lactation patterns in Holsteins Livestock Production Science. 67: 19-30. DOI: 10.1016/S0301-6226(00)00193-7 |
0.494 |
|
| 1998 |
Rodriguez-Zas SL, Gianola D, Shook GE. Bayesian analysis via Gibbs sampling of susceptibility to intramammary infection in Holstein cattle. Journal of Dairy Science. 81: 2710-22. PMID 9812276 DOI: 10.3168/Jds.S0022-0302(98)75828-X |
0.484 |
|
| 1997 |
Rodriguez-Zas SL, Gianola D, Shook GE. Factors affecting susceptibility to intramammary infection and mastitis: an approximate Bayesian analysis. Journal of Dairy Science. 80: 75-85. PMID 9120098 DOI: 10.3168/Jds.S0022-0302(97)75914-9 |
0.492 |
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