Saad Jbabdi - Publications

Affiliations: 
FMRIB University of Oxford, Oxford, United Kingdom 

131 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Tendler BC, Hanayik T, Ansorge O, Bangerter-Christensen S, Berns GS, Bertelsen MF, Bryant KL, Foxley S, Martijn van den Heuvel P, Howard AFD, Huszar IN, Khrapitchev AA, Leonte A, Manger PR, Menke RAL, ... ... Jbabdi S, et al. The Digital Brain Bank, an open access platform for post-mortem datasets. Elife. 11. PMID 35297760 DOI: 10.7554/eLife.73153  0.342
2022 Douaud G, Lee S, Alfaro-Almagro F, Arthofer C, Wang C, McCarthy P, Lange F, Andersson JLR, Griffanti L, Duff E, Jbabdi S, Taschler B, Keating P, Winkler AM, Collins R, et al. SARS-CoV-2 is associated with changes in brain structure in UK Biobank. Nature. PMID 35255491 DOI: 10.1038/s41586-022-04569-5  0.429
2021 Farahibozorg SR, Bijsterbosch JD, Gong W, Jbabdi S, Smith SM, Harrison SJ, Woolrich MW. Hierarchical modelling of functional brain networks in population and individuals from big fMRI data. Neuroimage. 118513. PMID 34450262 DOI: 10.1016/j.neuroimage.2021.118513  0.431
2021 Douaud G, Lee S, Alfaro-Almagro F, Arthofer C, Wang C, Lange F, Andersson JLR, Griffanti L, Duff E, Jbabdi S, Taschler B, Winkler A, Nichols TE, Collins R, Matthews PM, et al. Brain imaging before and after COVID-19 in UK Biobank. Medrxiv : the Preprint Server For Health Sciences. PMID 34189535 DOI: 10.1101/2021.06.11.21258690  0.455
2021 Douaud G, Lee S, Alfaro-Almagro F, Arthofer C, Wang C, Lange F, Andersson JLR, Griffanti L, Duff E, Jbabdi S, Taschler B, Winkler A, Nichols TE, Collins R, Matthews PM, et al. Brain imaging before and after COVID-19 in UK Biobank. Medrxiv : the Preprint Server For Health Sciences. PMID 34189535 DOI: 10.1101/2021.06.11.21258690  0.455
2020 Bijsterbosch J, Harrison SJ, Jbabdi S, Woolrich M, Beckmann C, Smith S, Duff EP. Challenges and future directions for representations of functional brain organization. Nature Neuroscience. PMID 33106677 DOI: 10.1038/s41593-020-00726-z  0.447
2020 Haber SN, Yendiki A, Jbabdi S. Four Deep Brain Stimulation Targets for Obsessive-Compulsive Disorder: Are They Different? Biological Psychiatry. PMID 32951818 DOI: 10.1016/J.Biopsych.2020.06.031  0.426
2020 Roumazeilles L, Eichert N, Bryant KL, Folloni D, Sallet J, Vijayakumar S, Foxley S, Tendler BC, Jbabdi S, Reveley C, Verhagen L, Dershowitz LB, Guthrie M, Flach E, Miller KL, et al. Longitudinal connections and the organization of the temporal cortex in macaques, great apes, and humans. Plos Biology. 18: e3000810. PMID 32735557 DOI: 10.1371/Journal.Pbio.3000810  0.384
2020 Tendler BC, Foxley S, Hernandez-Fernandez M, Cottaar M, Scott C, Ansorge O, Miller KL, Jbabdi S. Use of multi-flip angle measurements to account for transmit inhomogeneity and non-Gaussian diffusion in DW-SSFP. Neuroimage. 117113. PMID 32621975 DOI: 10.1016/J.Neuroimage.2020.117113  0.382
2020 Autio JA, Glasser MF, Ose T, Donahue CJ, Bastiani M, Ohno M, Kawabata Y, Urushibata Y, Murata K, Nishigori K, Yamaguchi M, Hori Y, Yoshida A, Go Y, Coalson TS, ... Jbabdi S, et al. Towards HCP-Style Macaque Connectomes: 24-Channel 3T Multi-Array Coil, MRI Sequences and Preprocessing. Neuroimage. 116800. PMID 32276072 DOI: 10.1016/J.Neuroimage.2020.116800  0.553
2020 Becker R, Vidaurre D, Quinn AJ, Abeysuriya RG, Parker Jones O, Jbabdi S, Woolrich MW. Transient spectral events in resting state MEG predict individual task responses. Neuroimage. 215: 116818. PMID 32276062 DOI: 10.1016/J.Neuroimage.2020.116818  0.338
2020 Eichert N, Robinson EC, Bryant KL, Jbabdi S, Jenkinson M, Li L, Krug K, Watkins KE, Mars RB. Cross-species cortical alignment identifies different types of anatomical reorganization in the primate temporal lobe. Elife. 9. PMID 32202497 DOI: 10.7554/Elife.53232  0.468
2020 Eichert N, Robinson EC, Bryant KL, Jbabdi S, Jenkinson M, Li L, Krug K, Watkins KE, Mars RB. Author response: Cross-species cortical alignment identifies different types of anatomical reorganization in the primate temporal lobe Elife. DOI: 10.7554/Elife.53232.Sa2  0.321
2019 Haber SN, Tang W, Choi EY, Yendiki A, Liu H, Jbabdi S, Versace A, Phillips M. Circuits, Networks, and Neuropsychiatric Disease: Transitioning From Anatomy to Imaging. Biological Psychiatry. PMID 31870495 DOI: 10.1016/J.Biopsych.2019.10.024  0.451
2019 Howard AF, Mollink J, Kleinnijenhuis M, Pallebage-Gamarallage M, Bastiani M, Cottaar M, Miller KL, Jbabdi S. Joint modelling of diffusion MRI and microscopy. Neuroimage. 116014. PMID 31315062 DOI: 10.1016/J.Neuroimage.2019.116014  0.406
2019 Tang W, Jbabdi S, Zhu Z, Cottaar M, Grisot G, Lehman JF, Yendiki A, Haber SN. A connectional hub in the rostral anterior cingulate cortex links areas of emotion and cognitive control. Elife. 8. PMID 31215864 DOI: 10.7554/Elife.43761  0.412
2019 Smith S, Duff E, Groves A, Nichols TE, Jbabdi S, Westlye LT, Tamnes CK, Engvig A, Walhovd KB, Fjell AM, Johansen-Berg H, Douaud G. Structural variability in the human brain reflects fine-grained functional architecture at the population level. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 31152123 DOI: 10.1523/Jneurosci.2912-18.2019  0.671
2019 Mollink J, Smith SM, Elliott LT, Kleinnijenhuis M, Hiemstra M, Alfaro-Almagro F, Marchini J, van Cappellen van Walsum AM, Jbabdi S, Miller KL. The spatial correspondence and genetic influence of interhemispheric connectivity with white matter microstructure. Nature Neuroscience. PMID 30988526 DOI: 10.1038/S41593-019-0379-2  0.531
2019 Tang W, Jbabdi S, Zhu Z, Cottaar M, Grisot G, Lehman JF, Yendiki A, Haber SN. Author response: A connectional hub in the rostral anterior cingulate cortex links areas of emotion and cognitive control Elife. DOI: 10.7554/Elife.43761.022  0.326
2018 Mars RB, Eichert N, Jbabdi S, Verhagen L, Rushworth MF. Connectivity and the search for specializations in the language-capable brain. Current Opinion in Behavioral Sciences. 21: 19-26. PMID 33898657 DOI: 10.1016/j.cobeha.2017.11.001  0.594
2018 Mars RB, O'Muircheartaigh J, Folloni D, Li L, Glasser MF, Jbabdi S, Bryant KL. Concurrent analysis of white matter bundles and grey matter networks in the chimpanzee. Brain Structure & Function. PMID 30569281 DOI: 10.1007/S00429-018-1817-8  0.497
2018 Hernandez-Fernandez M, Reguly I, Jbabdi S, Giles M, Smith S, Sotiropoulos SN. Using GPUs to accelerate computational diffusion MRI: From microstructure estimation to tractography and connectomes. Neuroimage. 188: 598-615. PMID 30537563 DOI: 10.1016/J.Neuroimage.2018.12.015  0.473
2018 Harms MP, Somerville LH, Ances BM, Andersson J, Barch DM, Bastiani M, Bookheimer SY, Brown TB, Buckner RL, Burgess GC, Coalson TS, Chappell MA, Dapretto M, Douaud G, Fischl B, ... ... Jbabdi S, et al. Extending the human connectome project across ages: Imaging protocols for the Lifespan development and aging projects. Neuroimage. PMID 30261308 DOI: 10.1016/J.Neuroimage.2018.09.060  0.446
2018 Mars RB, Passingham RE, Jbabdi S. Connectivity Fingerprints: From Areal Descriptions to Abstract Spaces. Trends in Cognitive Sciences. PMID 30241910 DOI: 10.1016/J.Tics.2018.08.009  0.426
2018 Eichert N, Verhagen L, Folloni D, Jbabdi S, Khrapitchev AA, Sibson NR, Mantini D, Sallet J, Mars RB. What is special about the human arcuate fasciculus? Lateralization, projections, and expansion. Cortex; a Journal Devoted to the Study of the Nervous System and Behavior. PMID 29937266 DOI: 10.1016/J.Cortex.2018.05.005  0.387
2018 Bastiani M, Andersson J, Cordero-Grande L, Murgasova M, Hutter J, Price AN, Makropoulos A, Fitzgibbon SP, Hughes E, Rueckert D, Victor S, Rutherford M, Edwards AD, Smith S, Tournier JD, ... ... Jbabdi S, et al. Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project. Neuroimage. PMID 29852283 DOI: 10.1016/J.Neuroimage.2018.05.064  0.422
2018 Mars RB, Sotiropoulos SN, Passingham RE, Sallet J, Verhagen LM, Khrapitchev AA, Sibson N, Jbabdi S. Whole brain comparative anatomy using connectivity blueprints. Elife. 7. PMID 29749930 DOI: 10.7554/Elife.35237  0.423
2018 Cottaar M, Bastiani M, Chen C, Dikranian K, Van Essen D, Behrens TE, Sotiropoulos SN, Jbabdi S. A gyral coordinate system predictive of fibre orientations. Neuroimage. PMID 29684644 DOI: 10.1016/j.neuroimage.2018.04.040  0.317
2018 Pallebage-Gamarallage M, Foxley S, Menke RAL, Huszar IN, Jenkinson M, Tendler BC, Wang C, Jbabdi S, Turner MR, Miller KL, Ansorge O. Dissecting the pathobiology of altered MRI signal in amyotrophic lateral sclerosis: A post mortem whole brain sampling strategy for the integration of ultra-high-field MRI and quantitative neuropathology. Bmc Neuroscience. 19: 11. PMID 29529995 DOI: 10.1186/S12868-018-0416-1  0.351
2018 Hadida J, Sotiropoulos SN, Abeysuriya RG, Woolrich MW, Jbabdi S. Bayesian Optimisation of Large-Scale Biophysical Networks. Neuroimage. 174: 219-236. PMID 29518570 DOI: 10.1016/J.Neuroimage.2018.02.063  0.384
2018 Abeysuriya RG, Hadida J, Sotiropoulos SN, Jbabdi S, Becker R, Hunt BAE, Brookes MJ, Woolrich MW. A biophysical model of dynamic balancing of excitation and inhibition in fast oscillatory large-scale networks. Plos Computational Biology. 14: e1006007. PMID 29474352 DOI: 10.1371/Journal.Pcbi.1006007  0.383
2018 Safadi Z, Grisot G, Jbabdi S, Behrens T, Heilbronner SR, McLaughlin NCR, Mandeville J, Versace A, Phillips ML, Lehman J, Yendiki A, Haber SN. Functional segmentation of the anterior limb of the internal capsule: linking white matter abnormalities to specific connections. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 29358360 DOI: 10.1523/Jneurosci.2335-17.2017  0.618
2018 Mars RB, Sotiropoulos SN, Passingham RE, Sallet J, Verhagen L, Khrapitchev AA, Sibson N, Jbabdi S. Author response: Whole brain comparative anatomy using connectivity blueprints Elife. DOI: 10.7554/Elife.35237.013  0.38
2018 Mars RB, Eichert N, Jbabdi S, Verhagen L, Rushworth MF. Connectivity and the search for specializations in the language-capable brain Current Opinion in Behavioral Sciences. 21: 19-26. DOI: 10.1016/J.Cobeha.2017.11.001  0.632
2018 Tang W, Yendiki A, Jbabdi S, Haber S. 137. Location of Anterior Cingulate and Ventrolateral Prefrontal Cortical Hubs: Integration Between Emotional and Cognitive Functions Biological Psychiatry. 83: S56. DOI: 10.1016/J.Biopsych.2018.02.155  0.326
2017 Craddock RC, Bellec P, Jbabdi S. Neuroimage special issue on brain segmentation and parcellation - Editorial. Neuroimage. PMID 29197642 DOI: 10.1016/J.Neuroimage.2017.11.063  0.358
2017 Alfaro-Almagro F, Jenkinson M, Bangerter NK, Andersson JLR, Griffanti L, Douaud G, Sotiropoulos SN, Jbabdi S, Hernandez-Fernandez M, Vallee E, Vidaurre D, Webster M, McCarthy P, Rorden C, Daducci A, et al. Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank. Neuroimage. PMID 29079522 DOI: 10.1016/J.Neuroimage.2017.10.034  0.394
2017 Akram H, Sotiropoulos SN, Jbabdi S, Georgiev D, Mahlknecht P, Hyam J, Foltynie T, Limousin P, De Vita E, Jahanshahi M, Hariz M, Ashburner J, Behrens T, Zrinzo L. Subthalamic deep brain stimulation sweet spots and hyperdirect cortical connectivity in Parkinson's disease. Neuroimage. PMID 28711737 DOI: 10.1016/J.Neuroimage.2017.07.012  0.51
2017 Bastiani M, Cottaar M, Dikranian K, Ghosh A, Zhang H, Alexander DC, Behrens TE, Jbabdi S, Sotiropoulos SN. Improved tractography using asymmetric fibre orientation distributions. Neuroimage. PMID 28669902 DOI: 10.1016/J.Neuroimage.2017.06.050  0.367
2017 Mollink J, Kleinnijenhuis M, Cappellen van Walsum AV, Sotiropoulos SN, Cottaar M, Mirfin C, Heinrich MP, Jenkinson M, Pallebage-Gamarallage M, Ansorge O, Jbabdi S, Miller KL. Evaluating fibre orientation dispersion in white matter: Comparison of diffusion MRI, histology and polarized light imaging. Neuroimage. PMID 28602815 DOI: 10.1016/J.Neuroimage.2017.06.001  0.389
2017 Hutter J, Tournier JD, Price AN, Cordero-Grande L, Hughes EJ, Malik S, Steinweg J, Bastiani M, Sotiropoulos SN, Jbabdi S, Andersson J, Edwards AD, Hajnal JV. Time-efficient and flexible design of optimized multishell HARDI diffusion. Magnetic Resonance in Medicine. PMID 28557055 DOI: 10.1002/Mrm.26765  0.341
2017 Cardenas AM, Sarlls JE, Kwan JY, Bageac D, Gala ZS, Danielian LE, Ray-Chaudhury A, Wang HW, Miller KL, Foxley S, Jbabdi S, Welsh RC, Floeter MK. Pathology of callosal damage in ALS: An ex-vivo, 7 T diffusion tensor MRI study. Neuroimage. Clinical. 15: 200-208. PMID 28529876 DOI: 10.1016/J.Nicl.2017.04.024  0.31
2017 Kleinnijenhuis M, Mollink J, Lam WW, Kinchesh P, Khrapitchev AA, Smart SC, Jbabdi S, Miller KL. Choice of reference measurements affects quantification of long diffusion time behaviour using stimulated echoes. Magnetic Resonance in Medicine. PMID 28470858 DOI: 10.1002/Mrm.26711  0.309
2016 Parker Jones O, Voets NL, Adcock JE, Stacey R, Jbabdi S. Resting connectivity predicts task activation in pre-surgical populations. Neuroimage. Clinical. 13: 378-385. PMID 28123949 DOI: 10.1016/J.Nicl.2016.12.028  0.352
2016 Kolasinski J, Makin TR, Logan JP, Jbabdi S, Clare S, Stagg CJ, Johansen-Berg H. Perceptually relevant remapping of human somatotopy in 24 hours. Elife. 5. PMID 28035900 DOI: 10.7554/Elife.17280  0.568
2016 Miller KL, Alfaro-Almagro F, Bangerter NK, Thomas DL, Yacoub E, Xu J, Bartsch AJ, Jbabdi S, Sotiropoulos SN, Andersson JL, Griffanti L, Douaud G, Okell TW, Weale P, Dragonu I, et al. Multimodal population brain imaging in the UK Biobank prospective epidemiological study. Nature Neuroscience. PMID 27643430 DOI: 10.1038/Nn.4393  0.459
2016 Kikkert S, Kolasinski J, Jbabdi S, Tracey I, Beckmann CF, Johansen-Berg H, Makin TR. Revealing the neural fingerprints of a missing hand. Elife. 5. PMID 27552053 DOI: 10.7554/Elife.15292  0.558
2016 Donahue CJ, Sotiropoulos SN, Jbabdi S, Hernandez-Fernandez M, Behrens TE, Dyrby TB, Coalson T, Kennedy H, Knoblauch K, Van Essen DC, Glasser MF. Using Diffusion Tractography to Predict Cortical Connection Strength and Distance: A Quantitative Comparison with Tracers in the Monkey. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 6758-70. PMID 27335406 DOI: 10.1523/Jneurosci.0493-16.2016  0.627
2016 Tavor I, Parker Jones O, Mars RB, Smith SM, Behrens TE, Jbabdi S. Task-free MRI predicts individual differences in brain activity during task performance. Science (New York, N.Y.). 352: 216-20. PMID 27124457 DOI: 10.1126/Science.Aad8127  0.561
2016 Sotiropoulos SN, Hernández-Fernández M, Vu AT, Andersson JL, Moeller S, Yacoub E, Lenglet C, Ugurbil K, Behrens TE, Jbabdi S. Fusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the human connectome project. Neuroimage. PMID 27071694 DOI: 10.1016/J.Neuroimage.2016.04.014  0.499
2016 Barron HC, Vogels TP, Emir UE, Makin TR, O'Shea J, Clare S, Jbabdi S, Dolan RJ, Behrens TE. Unmasking Latent Inhibitory Connections in Human Cortex to Reveal Dormant Cortical Memories. Neuron. PMID 26996082 DOI: 10.1016/J.Neuron.2016.02.031  0.575
2016 Kolasinski J, Makin TR, Jbabdi S, Clare S, Stagg CJ, Johansen-Berg H. Investigating the Stability of Fine-Grain Digit Somatotopy in Individual Human Participants. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 1113-27. PMID 26818501 DOI: 10.1523/Jneurosci.1742-15.2016  0.578
2016 Warnaby CE, Seretny M, Mhuircheartaigh RN, Rogers R, Jbabdi S, Sleigh J, Tracey I. Anesthesia-induced Suppression of Human Dorsal Anterior Insula Responsivity at Loss of Volitional Behavioral Response. Anesthesiology. PMID 26808631 DOI: 10.1097/Aln.0000000000001027  0.351
2016 Kolasinski J, Makin TR, Logan JP, Jbabdi S, Clare S, Stagg CJ, Johansen-Berg H. Author response: Perceptually relevant remapping of human somatotopy in 24 hours Elife. DOI: 10.7554/Elife.17280.020  0.493
2016 Kikkert S, Kolasinski J, Jbabdi S, Tracey I, Beckmann CF, Johansen-Berg H, Makin TR. Author response: Revealing the neural fingerprints of a missing hand Elife. DOI: 10.7554/Elife.15292.016  0.477
2015 Mars RB, Foxley S, Verhagen L, Jbabdi S, Sallet J, Noonan MP, Neubert FX, Andersson JL, Croxson PL, Dunbar RI, Khrapitchev AA, Sibson NR, Miller KL, Rushworth MF. The extreme capsule fiber complex in humans and macaque monkeys: a comparative diffusion MRI tractography study. Brain Structure & Function. PMID 26627483 DOI: 10.1007/S00429-015-1146-0  0.634
2015 Jbabdi S, Sotiropoulos SN, Haber SN, Van Essen DC, Behrens TE. Measuring macroscopic brain connections in vivo. Nature Neuroscience. 18: 1546-55. PMID 26505566 DOI: 10.1038/Nn.4134  0.615
2015 Mollink J, van Baarsen KM, Dederen PJ, Foxley S, Miller KL, Jbabdi S, Slump CH, Grotenhuis JA, Kleinnijenhuis M, van Cappellen van Walsum AM. Dentatorubrothalamic tract localization with postmortem MR diffusion tractography compared to histological 3D reconstruction. Brain Structure & Function. PMID 26438333 DOI: 10.1007/S00429-015-1115-7  0.408
2015 van Baarsen KM, Kleinnijenhuis M, Jbabdi S, Sotiropoulos SN, Grotenhuis JA, van Cappellen van Walsum AM. A probabilistic atlas of the cerebellar white matter. Neuroimage. 124: 724-732. PMID 26385011 DOI: 10.1016/J.Neuroimage.2015.09.014  0.397
2015 Boccard SG, Fernandes H, Jbabdi S, Hartvelt TJ, Kringelbach ML, Quaghebeur G, Moir L, Mancebo VP, Pereira EA, Fitzgerald JJ, Green AL, Stein J, Aziz TZ. A tractography study of Deep Brain Stimulation of the Anterior Cingulate Cortex in chronic pain: a key to improve the targeting. World Neurosurgery. PMID 26344354 DOI: 10.1016/J.Wneu.2015.08.065  0.344
2015 Berns GS, Cook PF, Foxley S, Jbabdi S, Miller KL, Marino L. Diffusion tensor imaging of dolphin brains reveals direct auditory pathway to temporal lobe. Proceedings. Biological Sciences / the Royal Society. 282. PMID 26156774 DOI: 10.1098/Rspb.2015.1203  0.43
2015 Ezra M, Faull OK, Jbabdi S, Shane Pattinson KT. Connectivity-based segmentation of the periaqueductal gray matter in human with brainstem optimized diffusion MRI. Human Brain Mapping. 36: 3459-71. PMID 26138504 DOI: 10.1002/Hbm.22855  0.478
2015 Hernández M, Guerrero GD, Cecilia JM, García JM, Inuggi A, Jbabdi S, Behrens TE, Sotiropoulos SN. Correction: Accelerating Fibre Orientation Estimation from Diffusion Weighted Magnetic Resonance Imaging Using GPUs. Plos One. 10: e0130915. PMID 26066039 DOI: 10.1371/journal.pone.0130915  0.475
2015 Voets NL, Menke RA, Jbabdi S, Husain M, Stacey R, Carpenter K, Adcock JE. Thalamo-Cortical Disruption Contributes to Short-Term Memory Deficits in Patients with Medial Temporal Lobe Damage. Cerebral Cortex (New York, N.Y. : 1991). PMID 26009613 DOI: 10.1093/Cercor/Bhv109  0.412
2015 Kochunov P, Jahanshad N, Marcus D, Winkler A, Sprooten E, Nichols TE, Wright SN, Hong LE, Patel B, Behrens T, Jbabdi S, Andersson J, Lenglet C, Yacoub E, Moeller S, et al. Heritability of fractional anisotropy in human white matter: a comparison of Human Connectome Project and ENIGMA-DTI data. Neuroimage. 111: 300-11. PMID 25747917 DOI: 10.1016/J.Neuroimage.2015.02.050  0.567
2015 Berns GS, Cook PF, Foxley S, Jbabdi S, Miller KL, Marino L. Diffusion tensor imaging of dolphin brains reveals direct auditory pathway to temporal lobe Proceedings of the Royal Society B: Biological Sciences. 282. DOI: 10.1098/rspb.2015.1203  0.302
2015 Smith SM, Kindlmann G, Jbabdi S. Tract-Based Spatial Statistics and Other Approaches for Cross-Subject Comparison of Local Diffusion MRI Parameters Brain Mapping: An Encyclopedic Reference. 1: 437-464. DOI: 10.1016/B978-0-12-397025-1.00316-X  0.343
2014 Wiech K, Jbabdi S, Lin CS, Andersson J, Tracey I. Differential structural and resting state connectivity between insular subdivisions and other pain-related brain regions. Pain. 155: 2047-55. PMID 25047781 DOI: 10.1016/J.Pain.2014.07.009  0.398
2014 Robinson EC, Jbabdi S, Glasser MF, Andersson J, Burgess GC, Harms MP, Smith SM, Van Essen DC, Jenkinson M. MSM: a new flexible framework for Multimodal Surface Matching. Neuroimage. 100: 414-26. PMID 24939340 DOI: 10.1016/J.Neuroimage.2014.05.069  0.385
2014 Menke RA, Szewczyk-Krolikowski K, Jbabdi S, Jenkinson M, Talbot K, Mackay CE, Hu M. Comprehensive morphometry of subcortical grey matter structures in early-stage Parkinson's disease. Human Brain Mapping. 35: 1681-90. PMID 23861334 DOI: 10.1002/Hbm.22282  0.378
2014 Tziortzi AC, Haber SN, Searle GE, Tsoumpas C, Long CJ, Shotbolt P, Douaud G, Jbabdi S, Behrens TE, Rabiner EA, Jenkinson M, Gunn RN. Connectivity-based functional analysis of dopamine release in the striatum using diffusion-weighted MRI and positron emission tomography. Cerebral Cortex (New York, N.Y. : 1991). 24: 1165-77. PMID 23283687 DOI: 10.1093/Cercor/Bhs397  0.555
2013 Robinson EC, Jbabdi S, Andersson J, Smith S, Glasser MF, Van Essen DC, Burgess G, Harms MP, Barch DM, Barch DM. Multimodal surface matching: fast and generalisable cortical registration using discrete optimisation. Information Processing in Medical Imaging : Proceedings of the ... Conference. 23: 475-86. PMID 24683992 DOI: 10.1007/978-3-642-38868-2_40  0.441
2013 Sampaio-Baptista C, Khrapitchev AA, Foxley S, Schlagheck T, Scholz J, Jbabdi S, DeLuca GC, Miller KL, Taylor A, Thomas N, Kleim J, Sibson NR, Bannerman D, Johansen-Berg H. Motor skill learning induces changes in white matter microstructure and myelination. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 19499-503. PMID 24336716 DOI: 10.1523/Jneurosci.3048-13.2013  0.534
2013 Jbabdi S, Behrens TE. Long-range connectomics. Annals of the New York Academy of Sciences. 1305: 83-93. PMID 24329486 DOI: 10.1111/Nyas.12271  0.572
2013 Ní Mhuircheartaigh R, Warnaby C, Rogers R, Jbabdi S, Tracey I. Slow-wave activity saturation and thalamocortical isolation during propofol anesthesia in humans. Science Translational Medicine. 5: 208ra148. PMID 24154602 DOI: 10.1126/Scitranslmed.3006007  0.346
2013 O'Reilly JX, Jbabdi S, Rushworth MF, Behrens TE. Brain systems for probabilistic and dynamic prediction: computational specificity and integration. Plos Biology. 11: e1001662. PMID 24086106 DOI: 10.1371/Journal.Pbio.1001662  0.771
2013 O'Reilly JX, Croxson PL, Jbabdi S, Sallet J, Noonan MP, Mars RB, Browning PG, Wilson CR, Mitchell AS, Miller KL, Rushworth MF, Baxter MG. Causal effect of disconnection lesions on interhemispheric functional connectivity in rhesus monkeys. Proceedings of the National Academy of Sciences of the United States of America. 110: 13982-7. PMID 23924609 DOI: 10.1073/Pnas.1305062110  0.784
2013 Sallet J, Mars RB, Noonan MP, Neubert FX, Jbabdi S, O'Reilly JX, Filippini N, Thomas AG, Rushworth MF. The organization of dorsal frontal cortex in humans and macaques. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 12255-74. PMID 23884933 DOI: 10.1523/Jneurosci.5108-12.2013  0.789
2013 Assaf Y, Alexander DC, Jones DK, Bizzi A, Behrens TE, Clark CA, Cohen Y, Dyrby TB, Huppi PS, Knoesche TR, Lebihan D, Parker GJ, Poupon C, Anaby D, ... ... Jbabdi S, et al. The CONNECT project: Combining macro- and micro-structure. Neuroimage. 80: 273-82. PMID 23727318 DOI: 10.1016/J.Neuroimage.2013.05.055  0.567
2013 Craddock RC, Jbabdi S, Yan CG, Vogelstein JT, Castellanos FX, Di Martino A, Kelly C, Heberlein K, Colcombe S, Milham MP. Imaging human connectomes at the macroscale. Nature Methods. 10: 524-39. PMID 23722212 DOI: 10.1038/Nmeth.2482  0.451
2013 Sotiropoulos SN, Jbabdi S, Xu J, Andersson JL, Moeller S, Auerbach EJ, Glasser MF, Hernandez M, Sapiro G, Jenkinson M, Feinberg DA, Yacoub E, Lenglet C, Van Essen DC, Ugurbil K, et al. Advances in diffusion MRI acquisition and processing in the Human Connectome Project. Neuroimage. 80: 125-43. PMID 23702418 DOI: 10.1016/J.Neuroimage.2013.05.057  0.528
2013 Uğurbil K, Xu J, Auerbach EJ, Moeller S, Vu AT, Duarte-Carvajalino JM, Lenglet C, Wu X, Schmitter S, Van de Moortele PF, Strupp J, Sapiro G, De Martino F, Wang D, Harel N, ... ... Jbabdi S, et al. Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project. Neuroimage. 80: 80-104. PMID 23702417 DOI: 10.1016/J.Neuroimage.2013.05.012  0.637
2013 Hernández M, Guerrero GD, Cecilia JM, García JM, Inuggi A, Jbabdi S, Behrens TE, Sotiropoulos SN. Accelerating fibre orientation estimation from diffusion weighted magnetic resonance imaging using GPUs. Plos One. 8: e61892. PMID 23658616 DOI: 10.1371/journal.pone.0061892  0.521
2013 Blumensath T, Jbabdi S, Glasser MF, Van Essen DC, Ugurbil K, Behrens TE, Smith SM. Spatially constrained hierarchical parcellation of the brain with resting-state fMRI. Neuroimage. 76: 313-24. PMID 23523803 DOI: 10.1016/J.Neuroimage.2013.03.024  0.619
2013 Jbabdi S, Lehman JF, Haber SN, Behrens TE. Human and monkey ventral prefrontal fibers use the same organizational principles to reach their targets: tracing versus tractography. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 3190-201. PMID 23407972 DOI: 10.1523/Jneurosci.2457-12.2013  0.61
2013 Sotiropoulos SN, Moeller S, Jbabdi S, Xu J, Andersson JL, Auerbach EJ, Yacoub E, Feinberg D, Setsompop K, Wald LL, Behrens TE, Ugurbil K, Lenglet C. Effects of image reconstruction on fiber orientation mapping from multichannel diffusion MRI: reducing the noise floor using SENSE. Magnetic Resonance in Medicine. 70: 1682-9. PMID 23401137 DOI: 10.1002/Mrm.24623  0.551
2013 Sotiropoulos SN, Jbabdi S, Andersson JL, Woolrich MW, Ugurbil K, Behrens TE. RubiX: combining spatial resolutions for Bayesian inference of crossing fibers in diffusion MRI. Ieee Transactions On Medical Imaging. 32: 969-82. PMID 23362247 DOI: 10.1109/Tmi.2012.2231873  0.549
2013 Jbabdi S, Sotiropoulos SN, Behrens TE. The topographic connectome. Current Opinion in Neurobiology. 23: 207-15. PMID 23298689 DOI: 10.1016/J.Conb.2012.12.004  0.607
2013 Behrens TEJ, Sotiropoulos SN, Jbabdi S. MR Diffusion Tractography Diffusion Mri: From Quantitative Measurement to in Vivo Neuroanatomy: Second Edition. 429-451. DOI: 10.1016/B978-0-12-396460-1.00019-6  0.474
2013 Van Essen DC, Jbabdi S, Sotiropoulos SN, Chen C, Dikranian K, Coalson T, Harwell J, Behrens TEJ, Glasser MF. Mapping Connections in Humans and Non-Human Primates. Aspirations and Challenges for Diffusion Imaging. Diffusion Mri: From Quantitative Measurement to in Vivo Neuroanatomy: Second Edition. 337-358. DOI: 10.1016/B978-0-12-396460-1.00016-0  0.519
2013 Smith SM, Kindlmann G, Jbabdi S. Cross-Subject Comparison of Local Diffusion MRI Parameters Diffusion Mri: From Quantitative Measurement to in Vivo Neuroanatomy: Second Edition. 209-239. DOI: 10.1016/B978-0-12-396460-1.00010-X  0.322
2012 Homola GA, Jbabdi S, Beckmann CF, Bartsch AJ. A brain network processing the age of faces. Plos One. 7: e49451. PMID 23185334 DOI: 10.1371/Journal.Pone.0049451  0.372
2012 O'Reilly JX, Jbabdi S, Behrens TE. How can a Bayesian approach inform neuroscience? The European Journal of Neuroscience. 35: 1169-79. PMID 22487045 DOI: 10.1111/J.1460-9568.2012.08010.X  0.743
2012 Jbabdi S, Sotiropoulos SN, Savio AM, Graña M, Behrens TE. Model-based analysis of multishell diffusion MR data for tractography: how to get over fitting problems. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 68: 1846-55. PMID 22334356 DOI: 10.1002/Mrm.24204  0.561
2012 Tomassini V, Johansen-Berg H, Jbabdi S, Wise RG, Pozzilli C, Palace J, Matthews PM. Relating brain damage to brain plasticity in patients with multiple sclerosis. Neurorehabilitation and Neural Repair. 26: 581-93. PMID 22328685 DOI: 10.1177/1545968311433208  0.581
2012 Jbabdi S, Behrens TE. Specialization: the connections have it. Nature Neuroscience. 15: 171-2. PMID 22281709 DOI: 10.1038/Nn.3031  0.612
2012 Sotiropoulos SN, Behrens TE, Jbabdi S. Ball and rackets: Inferring fiber fanning from diffusion-weighted MRI. Neuroimage. 60: 1412-25. PMID 22270351 DOI: 10.1016/j.neuroimage.2012.01.056  0.474
2012 Miller KL, McNab JA, Jbabdi S, Douaud G. Diffusion tractography of post-mortem human brains: optimization and comparison of spin echo and steady-state free precession techniques. Neuroimage. 59: 2284-97. PMID 22008372 DOI: 10.1016/J.Neuroimage.2011.09.054  0.427
2012 Mars RB, Sallet J, Schüffelgen U, Jbabdi S, Toni I, Rushworth MF. Connectivity-based subdivisions of the human right "temporoparietal junction area": evidence for different areas participating in different cortical networks. Cerebral Cortex (New York, N.Y. : 1991). 22: 1894-903. PMID 21955921 DOI: 10.1093/Cercor/Bhr268  0.656
2012 Cerliani L, Thomas RM, Jbabdi S, Siero JC, Nanetti L, Crippa A, Gazzola V, D'Arceuil H, Keysers C. Probabilistic tractography recovers a rostrocaudal trajectory of connectivity variability in the human insular cortex. Human Brain Mapping. 33: 2005-34. PMID 21761507 DOI: 10.1002/Hbm.21338  0.452
2012 Sotiropoulos SN, Behrens TE, Jbabdi S. Modelling fibre fanning in diffusion-weighted MRI Proceedings - International Symposium On Biomedical Imaging. 14-17. DOI: 10.1109/ISBI.2012.6235472  0.475
2011 Jbabdi S, Johansen-Berg H. Tractography: where do we go from here? Brain Connectivity. 1: 169-83. PMID 22433046 DOI: 10.1089/Brain.2011.0033  0.616
2011 Rilling JK, Glasser MF, Jbabdi S, Andersson J, Preuss TM. Continuity, divergence, and the evolution of brain language pathways. Frontiers in Evolutionary Neuroscience. 3: 11. PMID 22319495 DOI: 10.3389/Fnevo.2011.00011  0.352
2011 Sallet J, Mars RB, Noonan MP, Andersson JL, O'Reilly JX, Jbabdi S, Croxson PL, Jenkinson M, Miller KL, Rushworth MF. Social network size affects neural circuits in macaques. Science (New York, N.Y.). 334: 697-700. PMID 22053054 DOI: 10.1126/Science.1210027  0.761
2011 Yendiki A, Panneck P, Srinivasan P, Stevens A, Zöllei L, Augustinack J, Wang R, Salat D, Ehrlich S, Behrens T, Jbabdi S, Gollub R, Fischl B. Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy. Frontiers in Neuroinformatics. 5: 23. PMID 22016733 DOI: 10.3389/Fninf.2011.00023  0.528
2011 Bosnell RA, Kincses T, Stagg CJ, Tomassini V, Kischka U, Jbabdi S, Woolrich MW, Andersson J, Matthews PM, Johansen-Berg H. Motor practice promotes increased activity in brain regions structurally disconnected after subcortical stroke. Neurorehabilitation and Neural Repair. 25: 607-16. PMID 21646444 DOI: 10.1177/1545968311405675  0.596
2011 Miller KL, Stagg CJ, Douaud G, Jbabdi S, Smith SM, Behrens TE, Jenkinson M, Chance SA, Esiri MM, Voets NL, Jenkinson N, Aziz TZ, Turner MR, Johansen-Berg H, McNab JA. Diffusion imaging of whole, post-mortem human brains on a clinical MRI scanner. Neuroimage. 57: 167-81. PMID 21473920 DOI: 10.1016/J.Neuroimage.2011.03.070  0.701
2011 Mars RB, Jbabdi S, Sallet J, O'Reilly JX, Croxson PL, Olivier E, Noonan MP, Bergmann C, Mitchell AS, Baxter MG, Behrens TE, Johansen-Berg H, Tomassini V, Miller KL, Rushworth MF. Diffusion-weighted imaging tractography-based parcellation of the human parietal cortex and comparison with human and macaque resting-state functional connectivity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 31: 4087-100. PMID 21411650 DOI: 10.1523/Jneurosci.5102-10.2011  0.796
2011 Douaud G, Jbabdi S, Behrens TE, Menke RA, Gass A, Monsch AU, Rao A, Whitcher B, Kindlmann G, Matthews PM, Smith S. DTI measures in crossing-fibre areas: increased diffusion anisotropy reveals early white matter alteration in MCI and mild Alzheimer's disease. Neuroimage. 55: 880-90. PMID 21182970 DOI: 10.1016/J.Neuroimage.2010.12.008  0.592
2011 Tomassini V, Johansen-Berg H, Leonardi L, Paixão L, Jbabdi S, Palace J, Pozzilli C, Matthews PM. Preservation of motor skill learning in patients with multiple sclerosis. Multiple Sclerosis (Houndmills, Basingstoke, England). 17: 103-15. PMID 20834040 DOI: 10.1177/1352458510381257  0.487
2011 Crofts JJ, Higham DJ, Bosnell R, Jbabdi S, Matthews PM, Behrens TE, Johansen-Berg H. Network analysis detects changes in the contralesional hemisphere following stroke. Neuroimage. 54: 161-9. PMID 20728543 DOI: 10.1016/j.neuroimage.2010.08.032  0.637
2011 Tomassini V, Jbabdi S, Kincses ZT, Bosnell R, Douaud G, Pozzilli C, Matthews PM, Johansen-Berg H. Structural and functional bases for individual differences in motor learning. Human Brain Mapping. 32: 494-508. PMID 20533562 DOI: 10.1002/Hbm.21037  0.584
2011 Ahmad A, Wiech K, Jbabdi S, Tracey I. Probabilistic connectivity between the prefrontal cortex and pain-relevant brain regions F1000research. 2. DOI: 10.7490/F1000Research.1180.1  0.394
2010 Menke RA, Jbabdi S, Miller KL, Matthews PM, Zarei M. Connectivity-based segmentation of the substantia nigra in human and its implications in Parkinson's disease. Neuroimage. 52: 1175-80. PMID 20677376 DOI: 10.1016/J.Neuroimage.2010.05.086  0.356
2010 Mhuircheartaigh RN, Rosenorn-Lanng D, Wise R, Jbabdi S, Rogers R, Tracey I. Cortical and subcortical connectivity changes during decreasing levels of consciousness in humans: a functional magnetic resonance imaging study using propofol. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 9095-102. PMID 20610743 DOI: 10.1523/Jneurosci.5516-09.2010  0.431
2010 Eickhoff SB, Jbabdi S, Caspers S, Laird AR, Fox PT, Zilles K, Behrens TE. Anatomical and functional connectivity of cytoarchitectonic areas within the human parietal operculum. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 6409-21. PMID 20445067 DOI: 10.1523/Jneurosci.5664-09.2010  0.658
2010 Jbabdi S, Behrens TE, Smith SM. Crossing fibres in tract-based spatial statistics. Neuroimage. 49: 249-56. PMID 19712743 DOI: 10.1016/J.Neuroimage.2009.08.039  0.55
2009 Nagy Z, Ashburner J, Andersson J, Jbabdi S, Draganski B, Skare S, Böhm B, Smedler AC, Forssberg H, Lagercrantz H. Structural correlates of preterm birth in the adolescent brain. Pediatrics. 124: e964-72. PMID 19858152 DOI: 10.1542/Peds.2008-3801  0.397
2009 McNab JA, Jbabdi S, Deoni SC, Douaud G, Behrens TE, Miller KL. High resolution diffusion-weighted imaging in fixed human brain using diffusion-weighted steady state free precession. Neuroimage. 46: 775-85. PMID 19344686 DOI: 10.1016/J.Neuroimage.2009.01.008  0.557
2009 Douaud G, Behrens TE, Poupon C, Cointepas Y, Jbabdi S, Gaura V, Golestani N, Krystkowiak P, Verny C, Damier P, Bachoud-Lévi AC, Hantraye P, Remy P. In vivo evidence for the selective subcortical degeneration in Huntington's disease. Neuroimage. 46: 958-66. PMID 19332141 DOI: 10.1016/J.Neuroimage.2009.03.044  0.505
2009 Woolrich MW, Jbabdi S, Patenaude B, Chappell M, Makni S, Behrens T, Beckmann C, Jenkinson M, Smith SM. Bayesian analysis of neuroimaging data in FSL. Neuroimage. 45: S173-86. PMID 19059349 DOI: 10.1016/J.Neuroimage.2008.10.055  0.606
2009 Pattinson KT, Mitsis GD, Harvey AK, Jbabdi S, Dirckx S, Mayhew SD, Rogers R, Tracey I, Wise RG. Determination of the human brainstem respiratory control network and its cortical connections in vivo using functional and structural imaging. Neuroimage. 44: 295-305. PMID 18926913 DOI: 10.1016/J.Neuroimage.2008.09.007  0.425
2009 Jbabdi S, Woolrich MW, Behrens TE. Multiple-subjects connectivity-based parcellation using hierarchical Dirichlet process mixture models. Neuroimage. 44: 373-84. PMID 18845262 DOI: 10.1016/j.neuroimage.2008.08.044  0.454
2009 Woolrich M, Behrens T, Jbabdi S. FMRI Dynamic Causal Modelling with Inferred Regions of Interest Neuroimage. 47: S168. DOI: 10.1016/S1053-8119(09)71802-6  0.48
2009 Petrović A, Smith S, Patenaude B, Jbabdi S, Zarei M, Jenkinson M. Tractography-Driven Registration for Improved Within-Surface Correspondence in Brain Structures Neuroimage. 47: S122. DOI: 10.1016/S1053-8119(09)71158-9  0.355
2009 Johansen-Berg H, Behrens TEJ, Jbabdi S, Watkins KE. Integration of measures of functional and structural MRI Neuromethods. 41: 785-809. DOI: 10.1007/978-1-60327-919-2_27  0.6
2008 Jbabdi S, Bellec P, Toro R, Daunizeau J, Pélégrini-Issac M, Benali H. Accurate anisotropic fast marching for diffusion-based geodesic tractography. International Journal of Biomedical Imaging. 2008: 320195. PMID 18299703 DOI: 10.1155/2008/320195  0.372
2007 Tomassini V, Jbabdi S, Klein JC, Behrens TE, Pozzilli C, Matthews PM, Rushworth MF, Johansen-Berg H. Diffusion-weighted imaging tractography-based parcellation of the human lateral premotor cortex identifies dorsal and ventral subregions with anatomical and functional specializations. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 27: 10259-69. PMID 17881532 DOI: 10.1523/Jneurosci.2144-07.2007  0.77
2007 Jbabdi S, Woolrich MW, Andersson JL, Behrens TE. A Bayesian framework for global tractography. Neuroimage. 37: 116-29. PMID 17543543 DOI: 10.1016/j.neuroimage.2007.04.039  0.553
2007 Daunizeau J, Grova C, Marrelec G, Mattout J, Jbabdi S, Pélégrini-Issac M, Lina JM, Benali H. Symmetrical event-related EEG/fMRI information fusion in a variational Bayesian framework. Neuroimage. 36: 69-87. PMID 17408972 DOI: 10.1016/J.Neuroimage.2007.01.044  0.349
2007 Behrens TE, Berg HJ, Jbabdi S, Rushworth MF, Woolrich MW. Probabilistic diffusion tractography with multiple fibre orientations: What can we gain? Neuroimage. 34: 144-55. PMID 17070705 DOI: 10.1016/J.Neuroimage.2006.09.018  0.654
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