| Arjun Bharioke | Visual system, Computational Neuroscience, Mouse Visual Cortex, ssEM Connectomics, Drosophila, Motion Detection | | 2008 | 2007 | Dmitri "Mitya" Chklovskii (grad student), Karel Svoboda (research assistant) |
| Grégory Gauvain | | | 2010 | | Gabe J. Murphy (post-doc) |
| Chuan Zhou | Neuroethology | | 2011 | | Bruce S. Baker (post-doc) |
| Phuong Chung | | | | | Julie H. Simpson (research assistant) |
| Yoshinori Aso | | | | | Hiromu Tanimoto (grad student), Gerald M. Rubin (post-doc) |
| Igor Siwanowicz | | | | | Hiromu Tanimoto (research scientist) |
| Koen Vervaeke | Barrel cortex, cerebellar cortex, hippocampus, basal forebrain | | 2011 | | Karel Svoboda (post-doc), Jeffrey C. Magee (grad student) |
| Troy R. Shirangi | Molecular Genetics, Neuroscience, Development, Evolution | | 2010 | | James W. Truman (post-doc) |
| Marta Rivera-Alba | Behavior, Drosophila, Computational Biology, Evolution | | 2013 | | Kristin Branson (post-doc) |
| Leopoldo Petreanu | cortex, anatomy, plasticty | | | | Karel Svoboda (post-doc) |
| Juan Nunez-Iglesias | connectomics, image segmentation, neuron reconstruction | | 2009 | 2012 | Dmitri "Mitya" Chklovskii (post-doc) |
| Tao Hu | | | 2008 | 2013 | Dmitri "Mitya" Chklovskii (post-doc) |
| Shaul Druckmann | | | 2009 | 2012 | Dmitri "Mitya" Chklovskii (post-doc) |
| Benjamin F. Fosque | Ion Channel Biophysics | | 2011 | 2014 | Eric R. Schreiter (research assistant), Douglas S. Kim (research assistant) |
| Karol Gregor | computational neuroscience, learning, vision | | | | Dmitri "Mitya" Chklovskii (research scientist) |
| Rong Gong | feeding system | | | | Scott M. Sternson (post-doc) |
| Attila Losonczy | cellular neuroscience | | 2003 | 2009 | Jeffrey C. Magee (post-doc) |
| Diego Adrian Gutnisky | Visual system, Whisker system | | 2010 | | Karel Svoboda (post-doc) |
| Aaron D. Milstein | Synaptic Integration | | 2009 | | Jeffrey C. Magee (post-doc) |
| Eugenia Chiappe | sensory-motor integration | | 2007 | 2012 | Vivek Jayaraman (post-doc) |
| Bryan M. Hooks | synaptic physiology, visual system development | | | | Gordon M. G. Shepherd (post-doc) |
| Samuel Andrew Hires | Touch, cortex, optogenetics, genetically encoded optical sensors. | | 2007 | 2008 | Karel Svoboda (post-doc), Loren Looger (post-doc) |
| Stephanie D. Albin | | | | | Julie H. Simpson (post-doc) |
| Quan Wen | Systems Neuroscience | | | | Dmitri "Mitya" Chklovskii (grad student) |
| Rodney Philip O'Connor | Neuroengineering, Bioelectronics, Biophotonics, Bioelectrics, Bioengineering, Electrophysiology, In vivo imaging, Calcium signalling | | 2008 | 2010 | Dmitry Rinberg (post-doc) |
| Alexandre Dieudonné | | | | | Michael Reiser (post-doc) |
| Deniz Atasoy | | | | | Scott M. Sternson (post-doc) |
| Mattias P. Karlsson | Learning and memory, hippocampus, mPFC | | 2008 | | Alla Karpova (post-doc) |
| Matt C. Smear | | | | | Thomas Bozza (post-doc), Dmitry Rinberg (post-doc) |
| Doyun Lee | Hippocampus | | 2008 | | Albert K. Lee (post-doc) |
| Mark T. Harnett | Dendrites, biophysics, computation | | 2009 | 2015 | Jeffrey C. Magee (post-doc) |
| Yufeng Pan | neurogenetics, Drosophila | | 2009 | | Bruce S. Baker (post-doc) |
| Yeka Aponte | Natural behaviours | | | | Scott M. Sternson (post-doc) |
| Xiaoliang Zhao | courtship, amyloid, astrocyte | | | | |
| Roman Shusterman | Olfaction, electrophysiology, optogenetics, behavior | | 2007 | 2012 | Dmitry Rinberg (post-doc) |
| Karel Svoboda | neocortical circuits | | | | |
| Bruce S. Baker | Genetics, Neuroscience | | | | |
| Dmitri "Mitya" Chklovskii | Theoretical Neuroscience, Connectomics | | | | |
| Gabe J. Murphy | | | | | |
| S.E. Roian Egnor | | | | | |
| Tsai-Wen Chen | Calcium imaging, Cerebral cortex | | | | |
| Martin Y. Peek | Drosophila Circuits and Behavior | | | | |
| Catherine R. von Reyn | | | | | |
| Kristin Branson | Machine Learning, Behavior | | | | |
| Simon P. Peron | Barrel cortex, Calcium imaging | | 2009 | 2016 | Karel Svoboda (post-doc) |
| Julie H. Simpson | | | | | |
| Rajyashree Sen | | | | | |
| Maya Jay | Systems Neuroscience | | 2016 | 2017 | Karel Svoboda (research assistant) |
| Olga B Botvinnik | bioinformatics, genomics, transcriptomics | | 2008 | 2008 | Sean Eddy (research assistant) |
| Han Hou | decision-making, reinforcement learning, large-scale ephys | | 2020 | | Karel Svoboda (post-doc), Nuo Li (post-doc) |
| Jeremy D. Cohen | in vivo electrophysiology, vibrissa somatosensory, superior colliculus, spatial learning, hippocampus, motor behavior | | | | |
| Akira Fushiki | | | 2015 | 2017 | Albert Cardona (post-doc) |
| Haining Zhong | | | 2008 | 2010 | Eric Betzig (research scientist) |
| Eric Betzig | imaging | | | | |
| Lin Zhong | | | | | |
| Joshua T. Dudman | Sensorimotor Systems | | | | Parvez Ahammad (collaborator) |
| Misha B. Ahrens | | | | | |
| Anthony Leonardo | neuroscience | | | | |
| James W. Truman | | | | | |
| Eric A. Yttri | visuomotor processing, basal ganglia | | | | |
| Jeffrey C. Magee | Dendritic information processing | | | | |
| Albert K. Lee | Hippocampus | | | | |
| Jinhyun Kim | Molecular Neurobiology | | | | |
| Alla Karpova | | | | | |
| Emily C. Willis | | | | | |
| Barry Dickson | mating behavior | | | | |
| Adam W. Hantman | Sensory transmission, spinal cord | | | | |
| Nuo Li | object recognition, plasticity, eye movements, physiology | | | | |
| Christine Grienberger | | | | | |
| Parvez Ahammad | | | | | |
| Eva Pastalkova | | | | | |
| Julide Bilen | Behavior, Neuronal Circuits | | | | |
| Fredrick (Trace) Henry | | | | | |
| Loren Looger | Protein Engineering | | | | |
| Tzumin Lee | Drosophila | | | | |
| Scott M. Sternson | | | | | |
| Erik B. Bloss | | | | | |
| Michael Reiser | Neuroethology, Cybernetics | | | | |
| Jeremy Freeman | Vision | | | | |
| Douglas S. Kim | Neuroscience | | | | |
| Javier Valdes Aleman | | Janelia Janelia | 2014 | 2019 | Albert Cardona (research assistant), Marta Zlatic (grad student) |
| Marta Zlatic | | | | | |
| Ingrid Andrade | | Janelia | 2013 | 2017 | Albert Cardona (research assistant) |
| Mei Shao | | Janelia Janelia | 2020 | 2019 | Albert Cardona (research scientist), Gerald M. Rubin (research scientist) |
| Matthew Berck | | Janelia | 2016 | 2018 | Albert Cardona (post-doc) |
| Nadine Randel | | Janelia | 2015 | | Albert Cardona (post-doc) |