Ken D. Yokoyama, Ph.D.
|Biology||Duke University, Durham, NC|
Mean distance: 19.27 (cluster 57)
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|Yokoyama KD, Zhang Y, Ma J. (2014) Tracing the evolution of lineage-specific transcription factor binding sites in a birth-death framework. Plos Computational Biology. 10: e1003771|
|Yokoyama KD, Pollock DD. (2012) SP transcription factor paralogs and DNA-binding sites coevolve and adaptively converge in mammals and birds. Genome Biology and Evolution. 4: 1102-17|
|Yokoyama KD, Thorne JL, Wray GA. (2011) Coordinated genome-wide modifications within proximal promoter cis-regulatory elements during vertebrate evolution. Genome Biology and Evolution. 3: 66-74|
|Yokoyama KD, Ohler U, Wray GA. (2009) Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships. Nucleic Acids Research. 37: e92|
|Haygood R, Fedrigo O, Hanson B, et al. (2007) Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution. Nature Genetics. 39: 1140-4|