Andreas R. Pfenning, Ph.D.
Affiliations: | 2012 | Computational Biology and Bioinformatics | Duke University, Durham, NC |
Area:
Vocal learningGoogle:
"Andreas Pfenning"Mean distance: 16.4 (cluster 6) | S | N | B | C | P |
Parents
Sign in to add mentor| Erich David Jarvis | grad student | 2012 | Duke | |
| (A Computational Synthesis of Genes, Behavior, and Evolution Provides Insights into the Molecular Basis of Vocal Learning.) | ||||
| Manolis Kellis | post-doc | MIT (Computational Biology Tree) | ||
Children
Sign in to add trainee| Ziheng Chen | grad student | 2021- | Carnegie Mellon (Computational Biology Tree) |
| BaDoi N. Phan | grad student | 2019-2023 | Carnegie Mellon |
| Morgan Wirthlin | post-doc | 2016-2022 | Carnegie Mellon |
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Publications
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| Huang K, Zeng T, Koc S, et al. (2024) Small-cohort GWAS discovery with AI over massive functional genomics knowledge graph. Medrxiv : the Preprint Server For Health Sciences |
| Arokiaraj CM, Leone MJ, Kleyman M, et al. (2024) Spatial, transcriptomic, and epigenomic analyses link dorsal horn neurons to chronic pain genetic predisposition. Cell Reports. 43: 114876 |
| Ramamurthy E, Agarwal S, Toong N, et al. (2024) Regression convolutional neural network models implicate peripheral immune regulatory variants in the predisposition to Alzheimer's disease. Plos Computational Biology. 20: e1012356 |
| Wirthlin ME, Schmid TA, Elie JE, et al. (2024) Vocal learning-associated convergent evolution in mammalian proteins and regulatory elements. Science (New York, N.Y.). eabn3263 |
| Phan BN, Ray MH, Xue X, et al. (2024) Single nuclei transcriptomics in human and non-human primate striatum in opioid use disorder. Nature Communications. 15: 878 |
| Chen HY, Phan BN, Shim G, et al. (2023) Psychiatric risk gene Transcription Factor 4 (TCF4) regulates the density and connectivity of distinct inhibitory interneuron subtypes. Molecular Psychiatry |
| Kaplow IM, Lawler AJ, Schäffer DE, et al. (2023) Relating enhancer genetic variation across mammals to complex phenotypes using machine learning. Science (New York, N.Y.). 380: eabm7993 |
| Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging base-pair mammalian constraint to understand genetic variation and human disease. Science (New York, N.Y.). 380: eabn2937 |
| Christmas MJ, Kaplow IM, Genereux DP, et al. (2023) Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.). 380: eabn3943 |
| Sullivan PF, Meadows JRS, Gazal S, et al. (2023) Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease. Biorxiv : the Preprint Server For Biology |