Hamid R. Chitsaz, Ph.D.
Affiliations: | 2008 | University of Illinois, Urbana-Champaign, Urbana-Champaign, IL |
Area:
Computer Science, Robotics EngineeringGoogle:
"Hamid Chitsaz"Parents
Sign in to add mentor| Steven M. LaValle | grad student | 2008 | UIUC | |
| (Geodesic problems for mobile robots.) | ||||
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Publications
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| Movahedi NS, Embree M, Nagarajan H, et al. (2016) Efficient Synergistic Single-Cell Genome Assembly. Frontiers in Bioengineering and Biotechnology. 4: 42 |
| Gholami M, Arbabi A, Sharifi-Zarchi A, et al. (2014) ARYANA: Aligning Reads by Yet Another Approach Bmc Bioinformatics. 15: 1-10 |
| Embree M, Nagarajan H, Movahedi N, et al. (2014) Single-cell genome and metatranscriptome sequencing reveal metabolic interactions of an alkane-degrading methanogenic community. The Isme Journal. 8: 757-67 |
| Taghavi Z, Movahedi NS, Draghici S, et al. (2013) Distilled single-cell genome sequencing and de novo assembly for sparse microbial communities. Bioinformatics (Oxford, England). 29: 2395-401 |
| Bradnam KR, Fass JN, Alexandrov A, et al. (2013) Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience. 2: 10 |
| Forouzmand E, Chitsaz H. (2013) The RNA Newton polytope and learnability of energy parameters Bioinformatics. 29: 300-307 |
| McLean JS, Lombardo MJ, Badger JH, et al. (2013) Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum. Proceedings of the National Academy of Sciences of the United States of America. 110: E2390-9 |
| Taghavi Z, Movahedi NS, Draghici S, et al. (2013) Reduced cost single cell genome sequencing and de novo assembly of microbial communities F1000research. 4 |
| Ronen R, Boucher C, Chitsaz H, et al. (2012) sEQuel: Improving the accuracy of genome assemblies Bioinformatics. 28: i188-i196 |
| Chitsaz H, Yee-Greenbaum JL, Tesler G, et al. (2011) Efficient de novo assembly of single-cell bacterial genomes from short-read data sets. Nature Biotechnology. 29: 915-21 |