John L. R. Rubenstein
Affiliations: | University of California, San Francisco, San Francisco, CA |
Area:
brain developmentWebsite:
http://physio.ucsf.edu/rubenstein/members/bios/jrubenstein.aspGoogle:
"John Rubenstein"Bio:
http://searchworks-lb.stanford.edu/view/1044090
Mean distance: 13.39 (cluster 11) | S | N | B | C | P |
Parents
Sign in to add mentor| Harden M. McConnell | grad student | 1977-1980 | Stanford (Chemistry Tree) |
| James E. Rothman | grad student | 1980-1982 | Stanford (Cell Biology Tree) |
| Jean–François Nicolas | post-doc | Institut Pasteur | |
| François Jacob | post-doc | 1984-1986 | Institut Pasteur |
Children
Sign in to add trainee| Shahriar Sheikhbahaei | research assistant | 2010-2012 | UCSF / UC Berkeley |
| Gabriel L. McKinsey | grad student | UCSF | |
| Shanni Silberberg | grad student | 2008- | UCSF |
| Anil D. Bagri | grad student | 2001 | UCSF |
| Michael L. Hultner | grad student | 2001 | UCSF |
| Jason E. Long | grad student | 2002 | UCSF |
| Jeremy A. Cholfin | grad student | 2003-2007 | UCSF |
| Annie Arguello | grad student | 2013 | UCSF |
| Kartik Pattabiraman | grad student | 2009-2014 | UCSF |
| Stewart A. Anderson | post-doc | UCSF | |
| Sonia Garel | post-doc | ENS Paris | |
| Robert F. Hevner | post-doc | UCSF | |
| Kelly J. Huffman | post-doc | UCSF | |
| Diana M. Kahn | post-doc | UCSF | |
| Sussan Paydar | post-doc | UCSF | |
| Lori Sussel | post-doc | UCSF (Cell Biology Tree) | |
| Yasushi O. OHKUBO | post-doc | 1996-2000 | UCSF |
| Oscar Marín | post-doc | 1998-2003 | UCSF |
| Gregory B. Potter | post-doc | 2002-2008 | UCSF |
| Magdalena A. Petryniak | post-doc | 2003-2008 | UCSF |
| Daniel Vogt | post-doc | 2009-2017 | UCSF |
Collaborators
Sign in to add collaborator| Sam Pleasure | collaborator | UCSF | |
| Matthew W. State | collaborator | ||
| Rong Mao | collaborator | 2006- | MIT |
BETA: Related publications
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Publications
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| Liu Z, Ypsilanti AR, Markenscoff-Papadimitriou E, et al. (2024) enhancers have distinct functions in controlling expression during cortical development. Proceedings of the National Academy of Sciences of the United States of America. 121: e2402368121 |
| Hu JS, Malik R, Sohal VS, et al. (2023) Loss in VIP-Lineage Cortical Interneurons Results in More VIP+ Interneurons and Enhanced Excitability. Cells. 13 |
| Tsai NY, Wang F, Toma K, et al. (2022) Trans-Seq maps a selective mammalian retinotectal synapse instructed by Nephronectin. Nature Neuroscience. 25: 659-674 |
| Ypsilanti AR, Pattabiraman K, Catta-Preta R, et al. (2021) Transcriptional network orchestrating regional patterning of cortical progenitors. Proceedings of the National Academy of Sciences of the United States of America. 118 |
| Markenscoff-Papadimitriou E, Binyameen F, Whalen S, et al. (2021) Autism risk gene POGZ promotes chromatin accessibility and expression of clustered synaptic genes. Cell Reports. 37: 110089 |
| Feng J, Hsu WH, Patterson D, et al. (2021) COUP-TFI specifies the medial entorhinal cortex identity and induces differential cell adhesion to determine the integrity of its boundary with neocortex. Science Advances. 7 |
| Rubin AN, Malik R, Cho KK, et al. (2020) Regulatory Elements Inserted into AAVs Confer Preferential Activity in Cortical Interneurons. Eneuro |
| Markenscoff-Papadimitriou E, Whalen S, Przytycki P, et al. (2020) A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell |
| Pai EL, Chen J, Fazel Darbandi S, et al. (2020) and control mouse pallial interneuron fate and maturation through neuropsychiatric disease gene regulation. Elife. 9 |
| Zhang Y, Liu G, Guo T, et al. (2020) Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog. Cell Reports. 30: 4490-4504.e4 |