John L. R. Rubenstein

University of California, San Francisco, San Francisco, CA 
brain development
"John Rubenstein"

Mean distance: 13.39 (cluster 11)


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Harden M. McConnell grad student 1977-1980 Stanford (Chemistry Tree)
James E. Rothman grad student 1980-1982 Stanford (Cell Biology Tree)
Jean–François Nicolas post-doc Institut Pasteur
François Jacob post-doc 1984-1986 Institut Pasteur


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Shahriar Sheikhbahaei research assistant 2010-2012 UCSF / UC Berkeley
Gabriel L. McKinsey grad student UCSF
Shanni Silberberg grad student 2008- UCSF
Anil D. Bagri grad student 2001 UCSF
Michael L. Hultner grad student 2001 UCSF
Jason E. Long grad student 2002 UCSF
Jeremy A. Cholfin grad student 2003-2007 UCSF
Annie Arguello grad student 2013 UCSF
Kartik Pattabiraman grad student 2009-2014 UCSF
Stewart A. Anderson post-doc UCSF
Sonia Garel post-doc ENS Paris
Robert F. Hevner post-doc UCSF
Kelly J. Huffman post-doc UCSF
Diana M. Kahn post-doc UCSF
Sussan Paydar post-doc UCSF
Lori Sussel post-doc UCSF (Cell Biology Tree)
Yasushi O. OHKUBO post-doc 1996-2000 UCSF
Oscar Marín post-doc 1998-2003 UCSF
Gregory B. Potter post-doc 2002-2008 UCSF
Magdalena A. Petryniak post-doc 2003-2008 UCSF
Daniel Vogt post-doc 2009-2017 UCSF


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Sam Pleasure collaborator UCSF
Matthew W. State collaborator
Rong Mao collaborator 2006- MIT
BETA: Related publications


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Ypsilanti AR, Pattabiraman K, Catta-Preta R, et al. (2021) Transcriptional network orchestrating regional patterning of cortical progenitors. Proceedings of the National Academy of Sciences of the United States of America. 118
Markenscoff-Papadimitriou E, Binyameen F, Whalen S, et al. (2021) Autism risk gene POGZ promotes chromatin accessibility and expression of clustered synaptic genes. Cell Reports. 37: 110089
Liang L, Fazel Darbandi S, Pochareddy S, et al. (2021) Developmental dynamics of voltage-gated sodium channel isoform expression in the human and mouse brain. Genome Medicine. 13: 135
Feng J, Hsu WH, Patterson D, et al. (2021) COUP-TFI specifies the medial entorhinal cortex identity and induces differential cell adhesion to determine the integrity of its boundary with neocortex. Science Advances. 7
Huang H, Rubenstein JL, Qiu M. (2021) Cracking the Codes of Cortical Glial Progenitors: Evidence for the Common Lineage of Astrocytes and Oligodendrocytes. Neuroscience Bulletin. 37: 437-439
Snetkova V, Ypsilanti AR, Akiyama JA, et al. (2021) Ultraconserved enhancer function does not require perfect sequence conservation. Nature Genetics
Kim DW, Liu K, Wang ZQ, et al. (2021) Gene regulatory networks controlling differentiation, survival, and diversification of hypothalamic Lhx6-expressing GABAergic neurons. Communications Biology. 4: 95
Rubin AN, Malik R, Cho KK, et al. (2020) Regulatory Elements Inserted into AAVs Confer Preferential Activity in Cortical Interneurons. Eneuro
Markenscoff-Papadimitriou E, Whalen S, Przytycki P, et al. (2020) A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell
Puelles L, Diaz C, Stühmer T, et al. (2020) Lacz-Reporter mapping of Dlx5/6 expression and genoarchitectural analysis of the postnatal mouse prethalamus. The Journal of Comparative Neurology
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