Michael Q. Zhang
Affiliations: | Computational Biology and Bioinformatics | Cold Spring Harbor Laboratory, Cold Spring Harbor, NY | |
| Director of the Center for Systems Biology | University of Texas at Dallas, Richardson, TX, United States |
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Parents
Sign in to add mentor| Joel Louis Lebowitz | grad student | 1987 | Rutgers, New Brunswick (Physics Tree) |
| Jerome K. Percus | post-doc | (Physics Tree) |
Children
Sign in to add trainee| DUSTIN E SCHONES | grad student | CSHL | |
| Andrew D Smith | grad student | USC | |
| Chaolin Zhang | grad student | 2004-2008 | CSHL |
| Mohamed Nadhir Djekidel | grad student | 2012-2016 | Tsinghua University |
| Susan J. Brown | post-doc | Kansas State University (Computational Biology Tree) | |
| Ramana V Davuluri | post-doc | Northwestern School of Medicine | |
| Ilya Ioshikhes | post-doc | University of Ottawa | |
| Jinhua Wang | post-doc | UMN | |
| Zhenyu Xuan | post-doc | UT Dallas |
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Publications
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| Yan P, Lu JY, Niu J, et al. (2020) LncRNA Platr22 promotes super-enhancer activity and stem cell pluripotency. Journal of Molecular Cell Biology |
| Chen Y, Wang Y, Liu X, et al. (2020) Model-based analysis of chromatin interactions from dCas9-Based CAPTURE-3C-seq. Plos One. 15: e0236666 |
| Kong R, Xu X, Liu X, et al. (2020) 2SigFinder: the combined use of small-scale and large-scale statistical testing for genomic island detection from a single genome. Bmc Bioinformatics. 21: 159 |
| Ramanand SG, Chen Y, Yuan J, et al. (2020) The landscape of RNA polymerase II associated chromatin interactions in prostate cancer. The Journal of Clinical Investigation |
| Xiong Q, Huang S, Li YH, et al. (2020) Single‑cell RNA sequencing of t(8;21) acute myeloid leukemia for risk prediction. Oncology Reports |
| Liu X, Chen Y, Zhang Y, et al. (2020) Multiplexed capture of spatial configuration and temporal dynamics of locus-specific 3D chromatin by biotinylated dCas9. Genome Biology. 21: 59 |
| Jia C, Wang LY, Yin GG, et al. (2019) Single-cell stochastic gene expression kinetics with coupled positive-plus-negative feedback. Physical Review. E. 100: 052406 |
| An Z, Liu P, Zheng J, et al. (2019) Sox2 and Klf4 as the Functional Core in Pluripotency Induction without Exogenous Oct4. Cell Reports. 29: 1986-2000.e8 |
| Xiong L, Xu K, Tian K, et al. (2019) SCALE method for single-cell ATAC-seq analysis via latent feature extraction. Nature Communications. 10: 4576 |
| Xiao R, Chen JY, Liang Z, et al. (2019) Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription. Cell. 178: 107-121.e18 |