Simon P. Garcia, Ph.D. - Publications

Affiliations: 
2004 Cornell University, Ithaca, NY, United States 
Area:
surface chemistry at the atomic scale using scanned probe microscopy

4/49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2004 Garcia SP, Bao H, Hines MA. Etchant anisotropy controls the step bunching instability in KOH etching of silicon. Physical Review Letters. 93: 166102. PMID 15525007 DOI: 10.1103/Physrevlett.93.166102  0.579
2004 Garcia SP, Bao H, Hines MA. Effects of diffusional processes on crystal etching: Kinematic theory extended to two dimensions Journal of Physical Chemistry B. 108: 6062-6071. DOI: 10.1021/Jp036856I  0.524
2003 Garcia SP, Bao H, Hines MA. Understanding the pH dependence of silicon etching: The importance of dissolved oxygen in buffered HF etchants Surface Science. 541: 252-261. DOI: 10.1016/S0039-6028(03)00952-X  0.576
2002 Garcia SP, Bao H, Manimaran M, Hines MA. Measuring the site-specific reactivity of impurities: The pronounced effect of dissolved oxygen on silicon etching Journal of Physical Chemistry B. 106: 8258-8264. DOI: 10.1021/Jp0207073  0.587
Low-probability matches (unlikely to be authored by this person)
2007 Garcia SP, Semancik S. Controlling the morphology of zinc oxide nanorods crystallized from aqueous solutions: The effect of crystal growth modifiers on aspect ratio Chemistry of Materials. 19: 4016-4022. DOI: 10.1021/cm061977r  0.2
2012 Meagley KL, Garcia SP. Chemical control of crystal growth with multidentate carboxylate ligands: Effect of ligand denticity on zinc oxide crystal shape Crystal Growth and Design. 12: 707-713. DOI: 10.1021/cg200992z  0.145
2002 Angel LA, Garcia SP, Ervin KM. Dynamics of the gas-phase reactions of chloride ion with fluoromethane: high excess translational activation energy for an endothermic S(N)2 reaction. Journal of the American Chemical Society. 124: 336-45. PMID 11782186 DOI: 10.1021/Ja012031F  0.119
2015 Garcia S, Hannezo E, Elgeti J, Joanny JF, Silberzan P, Gov NS. Physics of active jamming during collective cellular motion in a monolayer. Proceedings of the National Academy of Sciences of the United States of America. PMID 26627719 DOI: 10.1073/Pnas.1510973112  0.109
2014 Beaune G, Stirbat TV, Khalifat N, Cochet-Escartin O, Garcia S, Gurchenkov VV, Murrell MP, Dufour S, Cuvelier D, Brochard-Wyart F. How cells flow in the spreading of cellular aggregates. Proceedings of the National Academy of Sciences of the United States of America. 111: 8055-60. PMID 24835175 DOI: 10.1073/Pnas.1323788111  0.102
2009 Chen X, Islamova NI, Garcia SP, DiGirolamo JA, Lees WJ. Synthesis and optical properties of aqueous soluble indolylfulgimides. The Journal of Organic Chemistry. 74: 6777-83. PMID 19642626 DOI: 10.1021/Jo900909D  0.067
2007 Garcia SP, Delancey LB, Almeida JS, Chapman RW. Ecoforecasting in real time for commercial fisheries: The Atlantic white shrimp as a case study Marine Biology. 152: 15-24. DOI: 10.1007/S00227-007-0622-3  0.066
2013 Pinho AJ, Garcia SP, Pratas D, Ferreira PJ. DNA sequences at a glance. Plos One. 8: e79922. PMID 24278218 DOI: 10.1371/journal.pone.0079922  0.065
2018 Moitrier S, Blanch-Mercader C, Garcia S, Sliogeryte K, Martin T, Camonis J, Marcq P, Silberzan P, Bonnet I. Collective stresses drive competition between monolayers of normal and Ras-transformed cells. Soft Matter. PMID 30516225 DOI: 10.1039/C8Sm01523F  0.064
2005 Garcia SP, Almeida JS. Nearest neighbor embedding with different time delays. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 71: 037204. PMID 15903641 DOI: 10.1103/Physreve.71.037204  0.059
2008 Baptista MS, Garcia SP, Dana SK, Kurths J. Transmission of information and synchronization in a pair of coupled chaotic circuits: An experimental overview European Physical Journal: Special Topics. 165: 119-128. DOI: 10.1140/epjst/e2008-00855-y  0.057
2013 Garcia SP, Rodrigues JM, Santos S, Pratas D, Afreixo V, Bastos CA, Ferreira PJ, Pinho AJ. A genomic distance for assembly comparison based on compressed maximal exact matches. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 10: 793-8. PMID 25594089 DOI: 10.1109/TCBB.2013.77  0.057
2013 Afreixo V, Bastos CA, Garcia SP, Rodrigues JM, Pinho AJ, Ferreira PJ. The breakdown of the word symmetry in the human genome. Journal of Theoretical Biology. 335: 153-9. PMID 23831271 DOI: 10.1016/j.jtbi.2013.06.032  0.055
2010 Pinho AJ, Garcia SP, Ferreira PJSG, Afreixo V, Bastos CAC, Neves AJR, Rodrigues JMOS. Exploring homology using the concept of three-state entropy vector Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6282: 161-170. DOI: 10.1007/978-3-642-16001-1_14  0.055
2011 Afreixo V, Bastos CA, Pinho AJ, Garcia SP, Ferreira PJ. Genome analysis with distance to the nearest dissimilar nucleotide. Journal of Theoretical Biology. 275: 52-8. PMID 21295040 DOI: 10.1016/j.jtbi.2011.01.038  0.053
2013 Theveneau E, Steventon B, Scarpa E, Garcia S, Trepat X, Streit A, Mayor R. Chase-and-run between adjacent cell populations promotes directional collective migration. Nature Cell Biology. 15: 763-72. PMID 23770678 DOI: 10.1038/Ncb2772  0.048
2015 Canver MC, Smith EC, Sher F, Pinello L, Sanjana NE, Shalem O, Chen DD, Schupp PG, Vinjamur DS, Garcia SP, Luc S, Kurita R, Nakamura Y, Fujiwara Y, Maeda T, et al. BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis. Nature. PMID 26375006 DOI: 10.1038/Nature15521  0.046
2014 Chen L, Kostadima M, Martens JH, Canu G, Garcia SP, Turro E, Downes K, Macaulay IC, Bielczyk-Maczynska E, Coe S, Farrow S, Poudel P, Burden F, Jansen SB, Astle WJ, et al. Transcriptional diversity during lineage commitment of human blood progenitors. Science (New York, N.Y.). 345: 1251033. PMID 25258084 DOI: 10.1126/Science.1251033  0.045
2005 Garcia SP, Almeida JS. Multivariate phase space reconstruction by nearest neighbor embedding with different time delays. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 72: 027205. PMID 16196759 DOI: 10.1103/Physreve.72.027205  0.043
2011 Bastos CA, Afreixo V, Pinho AJ, Garcia SP, Rodrigues JM, Ferreira PJ. Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions. Journal of Integrative Bioinformatics. 8: 172. PMID 21926435 DOI: 10.2390/biecoll-jib-2011-172  0.043
2011 Garcia SP, Pinho AJ. Minimal absent words in four human genome assemblies. Plos One. 6: e29344. PMID 22220210 DOI: 10.1371/journal.pone.0029344  0.04
2011 Pinho AJ, Pratas D, Ferreira PJSG, Garcia SP. Symbolic to numerical conversion of DNA sequences using finite-context models European Signal Processing Conference. 2024-2028.  0.038
2012 Nocentini S, Reginensi D, Garcia S, Carulla P, Moreno-Flores MT, Wandosell F, Trepat X, Bribian A, del Río JA. Myelin-associated proteins block the migration of olfactory ensheathing cells: an in vitro study using single-cell tracking and traction force microscopy. Cellular and Molecular Life Sciences : Cmls. 69: 1689-703. PMID 22205212 DOI: 10.1007/S00018-011-0893-1  0.037
2003 Munarriz R, Maitland S, Garcia SP, Talakoub L, Goldstein I. A prospective duplex Doppler ultrasonographic study in women with sexual arousal disorder to objectively assess genital engorgement induced by EROS therapy. Journal of Sex & Marital Therapy. 29: 85-94. PMID 12735092 DOI: 10.1080/713847133  0.037
2011 Pinho AJ, Pratas D, Garcia SP. Complexity profiles of DNA sequences using finite-context models Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7058: 75-82. DOI: 10.1007/978-3-642-25364-5_8  0.035
2012 Pratas D, Pinho AJ, Garcia SP. Computation of the normalized compression distance of DNA sequences using a mixture of finite-context models Bioinformatics 2012 - Proceedings of the International Conference On Bioinformatics Models, Methods and Algorithms. 308-311.  0.032
2009 Pinho AJ, Ferreira PJ, Garcia SP, Rodrigues JM. On finding minimal absent words. Bmc Bioinformatics. 10: 137. PMID 19426495 DOI: 10.1186/1471-2105-10-137  0.03
2016 Giecold G, Marco E, Garcia SP, Trippa L, Yuan GC. Robust lineage reconstruction from high-dimensional single-cell data. Nucleic Acids Research. PMID 27207878 DOI: 10.1093/Nar/Gkw452  0.03
2008 Islamova NI, Chen X, Garcia SP, Guez G, Silva Y, Lees WJ. Improving the stability of photochromic fluorinated indolylfulgides Journal of Photochemistry and Photobiology a: Chemistry. 195: 228-234. DOI: 10.1016/j.jphotochem.2007.10.006  0.029
2013 Bastos CA, Afreixo V, Garcia SP, Pinho AJ. Inter-STOP symbol distances for the identification of coding regions. Journal of Integrative Bioinformatics. 10: 230. PMID 24231144 DOI: 10.2390/biecoll-jib-2013-230  0.027
2011 Garcia SP, Pinho AJ, Rodrigues JM, Bastos CA, Ferreira PJ. Minimal absent words in prokaryotic and eukaryotic genomes. Plos One. 6: e16065. PMID 21386877 DOI: 10.1371/journal.pone.0016065  0.026
2013 Afreixo V, Rodrigues JMOS, Garcia SP. Analysis of Word Symmetries in Human Genomes Using Next-Generation Sequencing Data Advances in Intelligent Systems and Computing. 222: 7-13. DOI: 10.1007/978-3-319-00578-2_2  0.021
2012 Pinho AJ, Pratas D, Garcia SP. GReEn: a tool for efficient compression of genome resequencing data. Nucleic Acids Research. 40: e27. PMID 22139935 DOI: 10.1093/nar/gkr1124  0.02
2013 Afreixo V, Garcia SP, Rodrigues JMOS. The breakdown of Symmetry in Word Pairs in 1,092 Human Genomes Jurnal Teknologi (Sciences and Engineering). 63: 1-8.  0.02
2013 Pinho AJ, Pratas D, Garcia SP. Compressing resequencing data with GReEn. Methods in Molecular Biology (Clifton, N.J.). 1038: 27-37. PMID 23872967 DOI: 10.1007/978-1-62703-514-9_2  0.019
2011 Bastos CAC, Afreixo V, Pinho AJ, Garcia SP, Rodrigues JMOS, Ferreira PJSG. Distances between dinucleotides in the human genome Advances in Intelligent and Soft Computing. 93: 205-211. DOI: 10.1007/978-3-642-19914-1_28  0.019
2009 Afreixo V, Bastos CA, Pinho AJ, Garcia SP, Ferreira PJ. Genome analysis with inter-nucleotide distances. Bioinformatics (Oxford, England). 25: 3064-70. PMID 19759198 DOI: 10.1093/bioinformatics/btp546  0.017
2006 Garcia SP, Moreno JAM, Fanals LF. Emotion recognition based on parameterized voice signal analysis | Reconocimiento de emociones basado en el análisis de la señal de voz parametrizada Cisti 2006 - Actas Da 1a Conferencia Iberica De Sistemas E Tecnologias De Informacao. 2: 837-854.  0.011
2013 Bastos CAC, Afreixo V, Garcia SP, Pinho AJ. Segmentation of DNA into Coding and Noncoding Regions Based on Inter-STOP Symbols Distances Advances in Intelligent Systems and Computing. 222: 23-28. DOI: 10.1007/978-3-319-00578-2_4  0.01
2014 von Frankenberg AD, do Nascimento FV, Gatelli LE, Nedel BL, Garcia SP, de Oliveira CS, Saddi-Rosa P, Reis AF, Canani LH, Gerchman F. Major components of metabolic syndrome and adiponectin levels: a cross-sectional study. Diabetology & Metabolic Syndrome. 6: 26. PMID 24568287 DOI: 10.1186/1758-5996-6-26  0.01
2012 Tovilla-Zárate C, Juárez-Rojop I, Peralta Jimenez Y, Jiménez MA, Vázquez S, Bermúdez-Ocaña D, Ramón-Frías T, Genis Mendoza AD, García SP, Narváez LL. Prevalence of anxiety and depression among outpatients with type 2 diabetes in the Mexican population. Plos One. 7: e36887. PMID 22629339 DOI: 10.1371/journal.pone.0036887  0.01
2012 Pratas D, Pinho AJ, Garcia SP. Exon: A web-based software toolkit for DNA sequence analysis Advances in Intelligent and Soft Computing. 154: 217-224. DOI: 10.1007/978-3-642-28839-5_25  0.01
2009 Garcia SP, Guimarães J, Zampieri JF, Martinez AL, Polanczyk G, Rohde LA. Response to methylphenidate in children and adolescents with ADHD: does comorbid anxiety disorders matters? Journal of Neural Transmission (Vienna, Austria : 1996). 116: 631-6. PMID 19370390 DOI: 10.1007/s00702-009-0211-3  0.01
1990 Rootenberg JD, Garcia SP. An odyssey through Iliad. Jama. 263: 758-9. PMID 2296133 DOI: 10.1001/jama.263.5.758  0.01
1989 Jimenez Felipe JH, Cruz NS, Olivares AC, Lopez Cervant es G, Garcia SP, Lopez Palomino H. Pheocromocytoma: A case report of a ten years old male and review of the literature | FEOCROMOCITOMA: INFORME DE UN CASO EN UN NINO DE 10 ANOS Y REVISION DE LITERATURA Revista Mexicana De Pediatria. 56: 243-250.  0.01
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