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Shigeki Watanabe, Ph.D. - Publications

Affiliations: 
2013 Biology University of Utah, Salt Lake City, UT 
Area:
Neurotransmission
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62 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Eddings CR, Fan M, Imoto Y, Itoh K, McDonald X, Eilers J, Anderson WS, Worley PF, Lippmann K, Nauen DW, Watanabe S. Ultrastructural membrane dynamics of mouse and human cortical synapses. Biorxiv : the Preprint Server For Biology. PMID 39763840 DOI: 10.1101/2024.12.26.630393  0.354
2024 Wang H, Vant JW, Zhang A, Sanchez RG, Wu Y, Micou ML, Luczak V, Whiddon Z, Carlson NM, Yu SB, Jabbo M, Yoon S, Abushawish AA, Ghassemian M, Masubuchi T, ... ... Watanabe S, et al. Organization of a functional glycolytic metabolon on mitochondria for metabolic efficiency. Nature Metabolism. PMID 39261628 DOI: 10.1038/s42255-024-01121-9  0.578
2024 Wu Z, Kusick GF, Berns MMM, Raychaudhuri S, Itoh K, Walter AM, Chapman ER, Watanabe S. Synaptotagmin 7 docks synaptic vesicles to support facilitation and Doc2α-triggered asynchronous release. Elife. 12. PMID 38536730 DOI: 10.7554/eLife.90632  0.347
2024 Wu Y, Ding C, Sharif B, Weinreb A, Swaim G, Hao H, Yogev S, Watanabe S, Hammarlund M. Polarized localization of kinesin-1 and RIC-7 drives axonal mitochondria anterograde transport. The Journal of Cell Biology. 223. PMID 38470363 DOI: 10.1083/jcb.202305105  0.6
2023 Ogunmowo T, Hoffmann C, Pepper R, Wang H, Gowrisankaran S, Ho A, Raychaudhuri S, Cooper BH, Milosevic I, Milovanovic D, Watanabe S. Intersectin and Endophilin condensates prime synaptic vesicles for release site replenishment. Biorxiv : the Preprint Server For Biology. PMID 37662300 DOI: 10.1101/2023.08.22.554276  0.386
2023 Ogunmowo TH, Jing H, Raychaudhuri S, Kusick GF, Imoto Y, Li S, Itoh K, Ma Y, Jafri H, Dalva MB, Chapman ER, Ha T, Watanabe S, Liu J. Membrane compression by synaptic vesicle exocytosis triggers ultrafast endocytosis. Nature Communications. 14: 2888. PMID 37210439 DOI: 10.1038/s41467-023-38595-2  0.396
2023 Mueller BD, Merrill SA, Watanabe S, Liu P, Niu LG, Singh A, Maldonado-Catala P, Cherry A, Rich MS, Silva M, Maricq AV, Wang ZW, Jorgensen EM. CaV1 and CaV2 calcium channels mediate the release of distinct pools of synaptic vesicles. Elife. 12. PMID 36820519 DOI: 10.7554/eLife.81407  0.776
2022 Vettkötter D, Schneider M, Goulden BD, Dill H, Liewald J, Zeiler S, Guldan J, Ateş YA, Watanabe S, Gottschalk A. Rapid and reversible optogenetic silencing of synaptic transmission by clustering of synaptic vesicles. Nature Communications. 13: 7827. PMID 36535932 DOI: 10.1038/s41467-022-35324-z  0.415
2022 Imoto Y, Raychaudhuri S, Ma Y, Fenske P, Sandoval E, Itoh K, Blumrich EM, Matsubayashi HT, Mamer L, Zarebidaki F, Söhl-Kielczynski B, Trimbuch T, Nayak S, Iwasa JH, Liu J, ... ... Watanabe S, et al. Dynamin is primed at endocytic sites for ultrafast endocytosis. Neuron. PMID 35809574 DOI: 10.1016/j.neuron.2022.06.010  0.577
2022 Birdsall V, Kirwan K, Zhu M, Imoto Y, Wilson SM, Watanabe S, Waites CL. Axonal transport of Hrs is activity dependent and facilitates synaptic vesicle protein degradation. Life Science Alliance. 5. PMID 35636965 DOI: 10.26508/lsa.202000745  0.389
2022 Kusick GF, Ogunmowo TH, Watanabe S. Transient docking of synaptic vesicles: Implications and mechanisms. Current Opinion in Neurobiology. 74: 102535. PMID 35398664 DOI: 10.1016/j.conb.2022.102535  0.456
2021 Jamal A, Markert S, Watanabe S. Investigating the role of Synaptotagmin-1 at ribbon synapses. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. 17: e057984. PMID 34971165 DOI: 10.1002/alz.057984  0.421
2021 Vevea JD, Kusick GF, Courtney KC, Chen E, Watanabe S, Chapman ER. Synaptotagmin 7 is targeted to the axonal plasma membrane through γ-secretase processing to promote synaptic vesicle docking in mouse hippocampal neurons. Elife. 10. PMID 34543184 DOI: 10.7554/eLife.67261  0.493
2020 Watanabe S, Davis MW, Kusick GF, Iwasa J, Jorgensen EM. SynapsEM: Computer-Assisted Synapse Morphometry. Frontiers in Synaptic Neuroscience. 12: 584549. PMID 33390925 DOI: 10.3389/fnsyn.2020.584549  0.593
2020 Kusick GF, Chin M, Raychaudhuri S, Lippmann K, Adula KP, Hujber EJ, Vu T, Davis MW, Jorgensen EM, Watanabe S. Synaptic vesicles transiently dock to refill release sites. Nature Neuroscience. PMID 32989294 DOI: 10.1038/s41593-020-00716-1  0.621
2019 Chanaday NL, Cousin MA, Milosevic I, Watanabe S, Morgan JR. The Synaptic Vesicle Cycle Revisited: New Insights into the Modes and Mechanisms. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 39: 8209-8216. PMID 31619489 DOI: 10.1523/Jneurosci.1158-19.2019  0.509
2019 Itoh K, Murata D, Kato T, Yamada T, Araki Y, Saito A, Adachi Y, Igarashi A, Li S, Pletnikov M, Huganir RL, Watanabe S, Kamiya A, Iijima M, Sesaki H. Brain-specific Drp1 regulates postsynaptic endocytosis and dendrite formation independently of mitochondrial division. Elife. 8. PMID 31603426 DOI: 10.7554/Elife.44739  0.37
2019 Itoh K, Murata D, Kato T, Yamada T, Araki Y, Saito A, Adachi Y, Igarashi A, Li S, Pletnikov M, Huganir RL, Watanabe S, Kamiya A, Iijima M, Sesaki H. Author response: Brain-specific Drp1 regulates postsynaptic endocytosis and dendrite formation independently of mitochondrial division Elife. DOI: 10.7554/Elife.44739.021  0.341
2019 Gan Q, Watanabe S. The Effect of Acute ATP Depletion on Synaptic Vesicle Endocytosis at the Ultrastructural Level Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.543  0.481
2019 Imoto Y, Raychaudhuri S, Azhar A, Watanabe S. Dynamin-1 Drives Fission of Vesicles within 100 MS during Synaptic Vesicle Endocytosis Biophysical Journal. 116: 92a. DOI: 10.1016/J.Bpj.2018.11.541  0.502
2019 Azhar A, Imoto Y, Watanabe S. GTP Concentration Bursts Locally at Endocytic Sites for Dynamin-Dependent Membrane Fisson Biophysical Journal. 116: 92a. DOI: 10.1016/J.Bpj.2018.11.540  0.301
2019 Kusick GF, Watanabe S. Synaptic Vesicle Fusion and Docking during the First 14 Milliseconds After an Action Potential Biophysical Journal. 116: 527a. DOI: 10.1016/J.Bpj.2018.11.2838  0.521
2019 Raychaudhuri S, Sandoval E, Watanabe S. Role of Membrane Remodeling Proteins in Ultrafast Endocytosis Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.1698  0.353
2018 Gan Q, Watanabe S. Synaptic Vesicle Endocytosis in Different Model Systems. Frontiers in Cellular Neuroscience. 12: 171. PMID 30002619 DOI: 10.3389/Fncel.2018.00171  0.543
2018 Watanabe S, Mamer LE, Raychaudhuri S, Luvsanjav D, Eisen J, Trimbuch T, Söhl-Kielczynski B, Fenske P, Milosevic I, Rosenmund C, Jorgensen EM. Synaptojanin and Endophilin Mediate Neck Formation during Ultrafast Endocytosis. Neuron. 98: 1184-1197.e6. PMID 29953872 DOI: 10.1016/J.Neuron.2018.06.005  0.669
2018 Gan Q, Watanabe S. ATP Depletion Impairs Activity-dependent Ultrafast Endocytosis at Hippocampal Synapses Microscopy and Microanalysis. 24: 1312-1313. DOI: 10.1017/S1431927618007043  0.441
2018 Kusick GF, Chin M, Watanabe S. Zap-and-Freeze Electron Microscopy Captures Synaptic Vesicle Exocytosis with Unprecedented Temporal Precision Microscopy and Microanalysis. 24: 1254-1255. DOI: 10.1017/S143192761800675X  0.498
2017 Li S, Raychaudhuri S, Watanabe S. Flash-and-Freeze: A Novel Technique to Capture Membrane Dynamics with Electron Microscopy. Journal of Visualized Experiments : Jove. PMID 28518090 DOI: 10.3791/55664  0.501
2017 Watanabe S, Boucrot E. Fast and ultrafast endocytosis. Current Opinion in Cell Biology. 47: 64-71. PMID 28391090 DOI: 10.1016/J.Ceb.2017.02.013  0.417
2017 Topalidou I, Chen PA, Cooper K, Watanabe S, Jorgensen EM, Ailion M. The NCA-1 and NCA-2 Ion Channels Function Downstream of Gq and Rho To Regulate Locomotion in Caenorhabditis elegans. Genetics. PMID 28325749 DOI: 10.1534/Genetics.116.198820  0.687
2016 Watanabe S. Flash-and-Freeze: Coordinating Optogenetic Stimulation with Rapid Freezing to Visualize Membrane Dynamics at Synapses with Millisecond Resolution. Frontiers in Synaptic Neuroscience. 8: 24. PMID 27594835 DOI: 10.3389/Fnsyn.2016.00024  0.451
2015 Watanabe S. Slow or fast? A tale of synaptic vesicle recycling. Science (New York, N.Y.). 350: 46-7. PMID 26430111 DOI: 10.1126/Science.Aad2996  0.547
2015 Watanabe S, Trimbuch T, Camacho-Perez M, Rost B, Rosenmund C, Jorgensen EM. Ultrafast Recycling of Synaptic Vesicles Biophysical Journal. 108: 10a. DOI: 10.1016/J.Bpj.2014.11.077  0.794
2014 Watanabe S, Trimbuch T, Camacho-Pérez M, Rost BR, Brokowski B, Söhl-Kielczynski B, Felies A, Davis MW, Rosenmund C, Jorgensen EM. Clathrin regenerates synaptic vesicles from endosomes. Nature. 515: 228-33. PMID 25296249 DOI: 10.1038/Nature13846  0.793
2014 Ailion M, Hannemann M, Dalton S, Pappas A, Watanabe S, Hegermann J, Liu Q, Han HF, Gu M, Goulding MQ, Sasidharan N, Schuske K, Hullett P, Eimer S, Jorgensen EM. Two Rab2 interactors regulate dense-core vesicle maturation. Neuron. 82: 167-80. PMID 24698274 DOI: 10.1016/J.Neuron.2014.02.017  0.703
2014 Watanabe S, Lehmann M, Hujber E, Fetter RD, Richards J, Söhl-Kielczynski B, Felies A, Rosenmund C, Schmoranzer J, Jorgensen EM. Nanometer-resolution fluorescence electron microscopy (nano-EM) in cultured cells. Methods in Molecular Biology (Clifton, N.J.). 1117: 503-26. PMID 24357377 DOI: 10.1007/978-1-62703-776-1_22  0.5
2014 Watanabe S, Davis MW, Jorgensen EM. Flash-and-freeze electron microscopy: Coupling optogenetics with high-pressure freezing Neuromethods. 84: 43-57. DOI: 10.1007/978-1-4614-9179-8_3  0.543
2013 Watanabe S, Rost BR, Camacho-Pérez M, Davis MW, Söhl-Kielczynski B, Rosenmund C, Jorgensen EM. Ultrafast endocytosis at mouse hippocampal synapses. Nature. 504: 242-7. PMID 24305055 DOI: 10.1038/Nature12809  0.795
2013 Watanabe S, Liu Q, Davis MW, Hollopeter G, Thomas N, Jorgensen NB, Jorgensen EM. Ultrafast endocytosis at Caenorhabditis elegans neuromuscular junctions. Elife. 2: e00723. PMID 24015355 DOI: 10.7554/Elife.00723  0.663
2013 Shao Z, Watanabe S, Christensen R, Jorgensen EM, Colón-Ramos DA. Synapse location during growth depends on glia location. Cell. 154: 337-50. PMID 23870123 DOI: 10.1016/J.Cell.2013.06.028  0.594
2013 Gu M, Liu Q, Watanabe S, Sun L, Hollopeter G, Grant BD, Jorgensen EM. AP2 hemicomplexes contribute independently to synaptic vesicle endocytosis. Elife. 2: e00190. PMID 23482940 DOI: 10.7554/Elife.00190  0.707
2013 Jurrus E, Watanabe S, Giuly RJ, Paiva AR, Ellisman MH, Jorgensen EM, Tasdizen T. Semi-automated neuron boundary detection and nonbranching process segmentation in electron microscopy images. Neuroinformatics. 11: 5-29. PMID 22644867 DOI: 10.1007/S12021-012-9149-Y  0.493
2013 Watanabe S, Liu Q, Davis MW, Hollopeter G, Thomas N, Jorgensen NB, Jorgensen EM. Author response: Ultrafast endocytosis at Caenorhabditis elegans neuromuscular junctions Elife. DOI: 10.7554/Elife.00723.023  0.377
2013 Gu M, Liu Q, Watanabe S, Sun L, Hollopeter G, Grant BD, Jorgensen EM. Author response: AP2 hemicomplexes contribute independently to synaptic vesicle endocytosis Elife. DOI: 10.7554/Elife.00190.027  0.693
2012 Watanabe S, Richards J, Hollopeter G, Hobson RJ, Davis WM, Jorgensen EM. Nano-fEM: protein localization using photo-activated localization microscopy and electron microscopy. Journal of Visualized Experiments : Jove. e3995. PMID 23242070 DOI: 10.3791/3995  0.505
2012 Watanabe S, Jorgensen EM. Visualizing proteins in electron micrographs at nanometer resolution. Methods in Cell Biology. 111: 283-306. PMID 22857934 DOI: 10.1016/B978-0-12-416026-2.00015-7  0.518
2012 Mullen GP, Grundahl KM, Gu M, Watanabe S, Hobson RJ, Crowell JA, McManus JR, Mathews EA, Jorgensen EM, Rand JB. UNC-41/stonin functions with AP2 to recycle synaptic vesicles in Caenorhabditis elegans. Plos One. 7: e40095. PMID 22808098 DOI: 10.1371/Journal.Pone.0040095  0.752
2012 Ernstrom GG, Weimer R, Pawar DR, Watanabe S, Hobson RJ, Greenstein D, Jorgensen EM. V-ATPase V1 sector is required for corpse clearance and neurotransmission in Caenorhabditis elegans. Genetics. 191: 461-75. PMID 22426883 DOI: 10.1534/Genetics.112.139667  0.625
2011 Oikonomou G, Perens EA, Lu Y, Watanabe S, Jorgensen EM, Shaham S. Opposing activities of LIT-1/NLK and DAF-6/patched-related direct sensory compartment morphogenesis in C. elegans. Plos Biology. 9: e1001121. PMID 21857800 DOI: 10.1371/Journal.Pbio.1001121  0.561
2011 Park M, Watanabe S, Poon VY, Ou CY, Jorgensen EM, Shen K. CYY-1/cyclin Y and CDK-5 differentially regulate synapse elimination and formation for rewiring neural circuits. Neuron. 70: 742-57. PMID 21609829 DOI: 10.1016/J.Neuron.2011.04.002  0.659
2011 Hobson RJ, Liu Q, Watanabe S, Jorgensen EM. Complexin maintains vesicles in the primed state in C. elegans. Current Biology : Cb. 21: 106-13. PMID 21215631 DOI: 10.1016/J.Cub.2010.12.015  0.704
2011 Watanabe S, Punge A, Hollopeter G, Willig KI, Hobson RJ, Davis MW, Hell SW, Jorgensen EM. Protein localization in electron micrographs using fluorescence nanoscopy. Nature Methods. 8: 80-4. PMID 21102453 DOI: 10.1038/Nmeth.1537  0.526
2011 Watanabe S, Oikonomou G, Shaham S, Jorgensen E. Molecular Architecture of a Sensory Ending Using Correlative Fluorescence and Electron Microscopy Microscopy and Microanalysis. 17: 362-363. DOI: 10.1017/S1431927611002686  0.48
2011 Watanabe S, Ebeling C, Oikonomou G, Shaham S, Gerton J, Jorgensen E. Three-Dimensional Reconstruction of Actin in a Sensory Glial Cell using Bi-Plane PALM Microscopy and Microanalysis. 17: 16-17. DOI: 10.1017/S143192761100095X  0.466
2010 Jurrus E, Paiva AR, Watanabe S, Anderson JR, Jones BW, Whitaker RT, Jorgensen EM, Marc RE, Tasdizen T. Detection of neuron membranes in electron microscopy images using a serial neural network architecture. Medical Image Analysis. 14: 770-83. PMID 20598935 DOI: 10.1016/J.Media.2010.06.002  0.495
2010 Ou CY, Poon VY, Maeder CI, Watanabe S, Lehrman EK, Fu AK, Park M, Fu WY, Jorgensen EM, Ip NY, Shen K. Two cyclin-dependent kinase pathways are essential for polarized trafficking of presynaptic components. Cell. 141: 846-58. PMID 20510931 DOI: 10.1016/J.Cell.2010.04.011  0.615
2009 Sato K, Ernstrom GG, Watanabe S, Weimer RM, Chen CH, Sato M, Siddiqui A, Jorgensen EM, Grant BD. Differential requirements for clathrin in receptor-mediated endocytosis and maintenance of synaptic vesicle pools. Proceedings of the National Academy of Sciences of the United States of America. 106: 1139-44. PMID 19151157 DOI: 10.1073/Pnas.0809541106  0.728
2008 Gu M, Schuske K, Watanabe S, Liu Q, Baum P, Garriga G, Jorgensen EM. Mu2 adaptin facilitates but is not essential for synaptic vesicle recycling in Caenorhabditis elegans. The Journal of Cell Biology. 183: 881-92. PMID 19047463 DOI: 10.1083/Jcb.200806088  0.776
2008 Hammarlund M, Watanabe S, Schuske K, Jorgensen EM. CAPS and syntaxin dock dense core vesicles to the plasma membrane in neurons. The Journal of Cell Biology. 180: 483-91. PMID 18250196 DOI: 10.1083/Jcb.200708018  0.783
2007 Jospin M, Watanabe S, Joshi D, Young S, Hamming K, Thacker C, Snutch TP, Jorgensen EM, Schuske K. UNC-80 and the NCA ion channels contribute to endocytosis defects in synaptojanin mutants. Current Biology : Cb. 17: 1595-600. PMID 17825559 DOI: 10.1016/J.Cub.2007.08.036  0.611
2007 Hammarlund M, Palfreyman MT, Watanabe S, Olsen S, Jorgensen EM. Open syntaxin docks synaptic vesicles. Plos Biology. 5: e198. PMID 17645391 DOI: 10.1371/Journal.Pbio.0050198  0.786
2007 Schuske K, Palfreyman MT, Watanabe S, Jorgensen EM. UNC-46 is required for trafficking of the vesicular GABA transporter. Nature Neuroscience. 10: 846-53. PMID 17558401 DOI: 10.1038/Nn1920  0.628
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