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Mihail Bota - Publications

Affiliations: 
University of Southern California, Los Angeles, CA, United States 
Area:
neuroinformatics, data mining, comparative neuroanatomy
Website:
http://brancusi.usc.edu/bkms
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Mitra P, Mezias C, Huo B, Bota M, Jayakumar J. Establishing neuroanatomical correspondences across mouse and marmoset brain structures. Research Square. PMID 38826382 DOI: 10.21203/rs.3.rs-4373678/v1  0.349
2024 Mezias C, Huo B, Bota M, Jayakumar J, Mitra PP. Establishing neuroanatomical correspondences across mouse and marmoset brain structures. Biorxiv : the Preprint Server For Biology. PMID 38765971 DOI: 10.1101/2024.05.06.592808  0.349
2018 Wosiski-Kuhn M, Bota M, Snider CA, Wilson SP, Venkataraju KU, Osten P, Stranahan AM. Hippocampal brain-derived neurotrophic factor determines recruitment of anatomically connected networks after stress in diabetic mice. Hippocampus. PMID 30098276 DOI: 10.1002/Hipo.23018  0.303
2018 Secretariat I, Bota M, Swanson L. 1st INCF Workshop on Neuroanatomical Nomenclature and Taxonomy F1000research. 7. DOI: 10.7490/F1000Research.1116024.1  0.436
2017 Kim Y, Yang GR, Pradhan K, Venkataraju KU, Bota M, García Del Molino LC, Fitzgerald G, Ram K, He M, Levine JM, Mitra P, Huang ZJ, Wang XJ, Osten P. Brain-wide Maps Reveal Stereotyped Cell-Type-Based Cortical Architecture and Subcortical Sexual Dimorphism. Cell. 171: 456-469.e22. PMID 28985566 DOI: 10.1016/J.Cell.2017.09.020  0.423
2015 Bota M, Sporns O, Swanson LW. Architecture of the cerebral cortical association connectome underlying cognition. Proceedings of the National Academy of Sciences of the United States of America. 112: E2093-101. PMID 25848037 DOI: 10.1073/pnas.1504394112  0.53
2014 Bota M, Talpalaru S, Hintiryan H, Dong HW, Swanson LW. BAMS2 workspace: a comprehensive and versatile neuroinformatic platform for collating and processing neuroanatomical connections. The Journal of Comparative Neurology. 522: 3160-76. PMID 24668342 DOI: 10.1002/Cne.23592  0.651
2013 Wang Z, Ocampo MA, Pang RD, Bota M, Bradesi S, Mayer EA, Holschneider DP. Alterations in prefrontal-limbic functional activation and connectivity in chronic stress-induced visceral hyperalgesia. Plos One. 8: e59138. PMID 23527114 DOI: 10.1371/Journal.Pone.0059138  0.354
2012 Bota M, Sporns O, Swanson LW. Neuroinformatics analysis of molecular expression patterns and neuron populations in gray matter regions: the rat BST as a rich exemplar. Brain Research. 1450: 174-93. PMID 22421015 DOI: 10.1016/j.brainres.2012.02.034  0.539
2012 Bota M, Dong HW, Swanson LW. Combining collation and annotation efforts toward completion of the rat and mouse connectomes in BAMS. Frontiers in Neuroinformatics. 6: 2. PMID 22403539 DOI: 10.3389/Fninf.2012.00002  0.664
2011 Russ TA, Ramakrishnan C, Hovy EH, Bota M, Burns GA. Knowledge engineering tools for reasoning with scientific observations and interpretations: a neural connectivity use case. Bmc Bioinformatics. 12: 351. PMID 21859449 DOI: 10.1186/1471-2105-12-351  0.66
2010 Swanson LW, Bota M. Foundational model of structural connectivity in the nervous system with a schema for wiring diagrams, connectome, and basic plan architecture. Proceedings of the National Academy of Sciences of the United States of America. 107: 20610-7. PMID 21078980 DOI: 10.1073/pnas.1015128107  0.593
2010 Bota M, Swanson LW. Collating and Curating Neuroanatomical Nomenclatures: Principles and Use of the Brain Architecture Knowledge Management System (BAMS). Frontiers in Neuroinformatics. 4: 3. PMID 20407640 DOI: 10.3389/fninf.2010.00003  0.606
2009 Bohland JW, Wu C, Barbas H, Bokil H, Bota M, Breiter HC, Cline HT, Doyle JC, Freed PJ, Greenspan RJ, Haber SN, Hawrylycz M, Herrera DG, Hilgetag CC, Huang ZJ, et al. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. Plos Computational Biology. 5: e1000334. PMID 19325892 DOI: 10.1371/Journal.Pcbi.1000334  0.63
2008 Bota M, Swanson LW. BAMS Neuroanatomical Ontology: Design and Implementation. Frontiers in Neuroinformatics. 2: 2. PMID 18974794 DOI: 10.3389/neuro.11.002.2008  0.578
2008 Bota M, Swanson L. 1st INCF Workshop on Neuroanatomical Nomenclature and Taxonomy Nature Precedings. 3: 1-1. DOI: 10.1038/Npre.2008.1780.1  0.503
2007 Bota M, Swanson LW. The neuron classification problem. Brain Research Reviews. 56: 79-88. PMID 17582506 DOI: 10.1016/j.brainresrev.2007.05.005  0.594
2007 Bota M, Swanson LW. Online workbenches for neural network connections. The Journal of Comparative Neurology. 500: 807-14. PMID 17177264 DOI: 10.1002/cne.21209  0.565
2006 Bota M, Swanson LW. A new module for on-line manipulation and display of molecular information in the brain architecture management system. Neuroinformatics. 4: 275-98. PMID 17142838 DOI: 10.1385/NI:4:4:275  0.586
2006 Arbib MA, Bota M. Neural homologies and the grounding of neurolinguistics Action to Language Via the Mirror Neuron System. 136-173. DOI: 10.1017/CBO9780511541599.006  0.422
2005 Bota M, Dong HW, Swanson LW. Brain architecture management system. Neuroinformatics. 3: 15-48. PMID 15897615 DOI: 10.1385/Ni:3:1:015  0.664
2005 Bota M, Swanson LW. The molecules module of the brain architecture management system Proceedings of the International Joint Conference On Neural Networks. 1: 515-520. DOI: 10.1109/IJCNN.2005.1555884  0.486
2004 Bota M, Arbib MA. Integrating databases and expert systems for the analysis of brain structures: connections, similarities, and homologies. Neuroinformatics. 2: 19-58. PMID 15067167 DOI: 10.1385/NI:2:1:019  0.618
2004 MacKenzie-Graham A, Lee EF, Dinov ID, Bota M, Shattuck DW, Ruffins S, Yuan H, Konstantinidis F, Pitiot A, Ding Y, Hu G, Jacobs RE, Toga AW. A multimodal, multidimensional atlas of the C57BL/6J mouse brain. Journal of Anatomy. 204: 93-102. PMID 15032916 DOI: 10.1111/J.1469-7580.2004.00264.X  0.426
2004 Arbib MA, Bota M. Response to Deacon: Evolving mirror systems: Homologies and the nature of neuroinformatics Trends in Cognitive Sciences. 8: 290-291. DOI: 10.1016/j.tics.2004.05.005  0.459
2003 MacKenzie-Graham A, Jones ES, Shattuck DW, Dinov ID, Bota M, Toga AW. The informatics of a C57BL/6J mouse brain atlas. Neuroinformatics. 1: 397-410. PMID 15043223 DOI: 10.1385/Ni:1:4:397  0.413
2003 Arbib M, Bota M. Language evolution: neural homologies and neuroinformatics. Neural Networks : the Official Journal of the International Neural Network Society. 16: 1237-60. PMID 14622882 DOI: 10.1016/j.neunet.2003.08.002  0.606
2003 Bota M, Dong HW, Swanson LW. From gene networks to brain networks. Nature Neuroscience. 6: 795-9. PMID 12886225 DOI: 10.1038/Nn1096  0.679
2001 Guazzelli A, Bota M, Arbib MA. Competitive Hebbian learning and the hippocampal place cell system: modeling the interaction of visual and path integration cues. Hippocampus. 11: 216-39. PMID 11769306 DOI: 10.1002/hipo.1039  0.532
2001 Bota M, Arbib MA. The NeuroHomology database Neurocomputing. 38: 1627-1631. DOI: 10.1016/S0925-2312(01)00518-5  0.605
1999 Guazzelli A, Bota M, Arbib MA. Incorporating path integration capabilities in the TAM-WG model of rodent navigation Neurocomputing. 26: 713-719. DOI: 10.1016/S0925-2312(98)00139-8  0.516
1998 Guazzelli A, Bota M, Corbacho FJ, Arbib MA. Affordances, motivations, and the world graph theory Adaptive Behavior. 6: 435-471. DOI: 10.1177/105971239800600305  0.536
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