Rob Kulathinal - Publications

Affiliations: 
Temple University, Philadelphia, PA, United States 
Area:
evolutionary genetics, population genomics, speciation, bioinformatics

36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Richardson V, Engel N, Kulathinal RJ. Comparative developmental genomics of sex-biased gene expression in early embryogenesis across mammals. Biology of Sex Differences. 14: 30. PMID 37208698 DOI: 10.1186/s13293-023-00520-z  0.357
2021 Borne F, Kulathinal RJ, Courtier-Orgogozo V. Glue Genes Are Subjected to Diverse Selective Forces during Drosophila Development. Genome Biology and Evolution. 13. PMID 34788814 DOI: 10.1093/gbe/evab248  0.447
2018 Tollis M, Hutchins ED, Stapley J, Rupp SM, Eckalbar WL, Maayan I, Lasku E, Infante CR, Dennis SR, Robertson JA, May CM, Crusoe MR, Bermingham E, DeNardo DF, Hsieh ST, ... Kulathinal RJ, et al. Comparative Genomics Reveals Accelerated Evolution in Conserved Pathways during the Diversification of Anole Lizards. Genome Biology and Evolution. PMID 29360978 DOI: 10.1093/Gbe/Evy013  0.568
2017 Kumar S, Konikoff C, Sanderford M, Liu L, Newfeld S, Ye J, Kulathinal RJ. FlyExpress 7: An Integrated Discovery Platform To Study Co-expressed Genes Using In Situ Hybridization Images in Drosophila. G3 (Bethesda, Md.). PMID 28667017 DOI: 10.1534/G3.117.040345  0.343
2016 Stanley CE, Kulathinal RJ. flyDIVaS: A Comparative Genomics Resource for Drosophila Divergence and Selection. G3 (Bethesda, Md.). PMID 27226167 DOI: 10.1534/g3.116.031138  0.596
2016 Stanley CE, Kulathinal RJ. Genomic signatures of domestication on neurogenetic genes in Drosophila melanogaster. Bmc Evolutionary Biology. 16: 6. PMID 26728183 DOI: 10.1186/s12862-015-0580-1  0.339
2013 Kronforst MR, Hansen ME, Crawford NG, Gallant JR, Zhang W, Kulathinal RJ, Kapan DD, Mullen SP. Hybridization reveals the evolving genomic architecture of speciation. Cell Reports. 5: 666-77. PMID 24183670 DOI: 10.1016/J.Celrep.2013.09.042  0.529
2013 Kulathinal RJ. Functional genetics in the post-genomics era: building a better roadmap in Drosophila. G3 (Bethesda, Md.). 3: 1451-2. PMID 24019096 DOI: 10.1534/g3.113.007351  0.41
2013 Kulathinal RJ. Functional genetics in the post-genomics era: building a better roadmap in Drosophila. Genetics. 195: 7-8. PMID 24018766 DOI: 10.1534/genetics.113.156497  0.315
2013 Civetta A, Eirín-López JM, Kulathinal R, Marshall JL. The evolution of sex-related traits and genes 2012. International Journal of Evolutionary Biology. 2013: 590769. PMID 23573457 DOI: 10.1155/2013/590769  0.744
2011 Kusumi K, Kulathinal RJ, Abzhanov A, Boissinot S, Crawford NG, Faircloth BC, Glenn TC, Janes DE, Losos JB, Menke DB, Poe S, Sanger TJ, Schneider CJ, Stapley J, Wade J, et al. Developing a community-based genetic nomenclature for anole lizards. Bmc Genomics. 12: 554. PMID 22077994 DOI: 10.1186/1471-2164-12-554  0.53
2011 Civetta A, Eirín-López JM, Kulathinal R, Marshall JL. The evolution of sex-related traits and genes. International Journal of Evolutionary Biology. 2011: 807218. PMID 21915381 DOI: 10.4061/2011/807218  0.71
2011 Grassa CJ, Kulathinal RJ. Elevated Evolutionary Rates among Functionally Diverged Reproductive Genes across Deep Vertebrate Lineages. International Journal of Evolutionary Biology. 2011: 274975. PMID 21811675 DOI: 10.4061/2011/274975  0.78
2010 Renn SC, Machado HE, Jones A, Soneji K, Kulathinal RJ, Hofmann HA. Using comparative genomic hybridization to survey genomic sequence divergence across species: a proof-of-concept from Drosophila. Bmc Genomics. 11: 271. PMID 20429934 DOI: 10.1186/1471-2164-11-271  0.524
2009 Sackton TB, Kulathinal RJ, Bergman CM, Quinlan AR, Dopman EB, Carneiro M, Marth GT, Hartl DL, Clark AG. Population genomic inferences from sparse high-throughput sequencing of two populations of Drosophila melanogaster. Genome Biology and Evolution. 1: 449-65. PMID 20333214 DOI: 10.1093/Gbe/Evp048  0.733
2009 Kulathinal RJ, Stevison LS, Noor MA. The genomics of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing. Plos Genetics. 5: e1000550. PMID 19578407 DOI: 10.1371/journal.pgen.1000550  0.404
2009 Shevelyov YY, Lavrov SA, Mikhaylova LM, Nurminsky ID, Kulathinal RJ, Egorova KS, Rozovsky YM, Nurminsky DI. The B-type lamin is required for somatic repression of testis-specific gene clusters. Proceedings of the National Academy of Sciences of the United States of America. 106: 3282-7. PMID 19218438 DOI: 10.1073/Pnas.0811933106  0.682
2008 Kulathinal RJ, Singh RS. The molecular basis of speciation: from patterns to processes, rules to mechanisms. Journal of Genetics. 87: 327-38. PMID 19147922 DOI: 10.1007/s12041-008-0055-x  0.56
2008 Kulathinal RJ, Bennett SM, Fitzpatrick CL, Noor MA. Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence. Proceedings of the National Academy of Sciences of the United States of America. 105: 10051-6. PMID 18621713 DOI: 10.1073/Pnas.0801848105  0.359
2007 Haerty W, Jagadeeshan S, Kulathinal RJ, Wong A, Ravi Ram K, Sirot LK, Levesque L, Artieri CG, Wolfner MF, Civetta A, Singh RS. Evolution in the fast lane: rapidly evolving sex-related genes in Drosophila. Genetics. 177: 1321-35. PMID 18039869 DOI: 10.1534/Genetics.107.078865  0.759
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Kulathinal RJ, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.674
2007 Lin MF, Carlson JW, Crosby MA, Matthews BB, Yu C, Park S, Wan KH, Schroeder AJ, Gramates LS, St Pierre SE, Roark M, Wiley KL, Kulathinal RJ, Zhang P, Myrick KV, et al. Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes. Genome Research. 17: 1823-36. PMID 17989253 DOI: 10.1101/Gr.6679507  0.712
2005 Singh RS, Kulathinal RJ. Male sex drive and the masculinization of the genome. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 27: 518-25. PMID 15832384 DOI: 10.1002/bies.20212  0.494
2005 Kulathinal RJ, Hartl DL. The latest buzz in comparative genomics. Genome Biology. 6: 201. PMID 15642105 DOI: 10.1186/Gb-2005-6-1-201  0.606
2004 Kulathinal RJ, Bettencourt BR, Hartl DL. Compensated deleterious mutations in insect genomes. Science (New York, N.Y.). 306: 1553-4. PMID 15498973 DOI: 10.1126/Science.1100522  0.492
2004 Castillo-Davis CI, Kondrashov FA, Hartl DL, Kulathinal RJ. The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint. Genome Research. 14: 802-11. PMID 15123580 DOI: 10.1101/Gr.2195604  0.79
2004 Kulathinal RJ, Singh RS. The nature of genetic variation in sex and reproduction-related genes among sibling species of the Drosophila melanogaster complex. Genetica. 120: 245-52. PMID 15088662 DOI: 10.1023/B:GENE.0000017645.84748.dd  0.629
2003 Sawyer SA, Kulathinal RJ, Bustamante CD, Hartl DL. Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection. Journal of Molecular Evolution. 57: S154-64. PMID 15008412 DOI: 10.1007/S00239-003-0022-3  0.62
2003 Kulathinal RJ, Skwarek L, Morton RA, Singh RS. Rapid evolution of the sex-determining gene, transformer: structural diversity and rate heterogeneity among sibling species of Drosophila. Molecular Biology and Evolution. 20: 441-52. PMID 12644565 DOI: 10.1093/molbev/msg053  0.535
2002 Torgerson DG, Kulathinal RJ, Singh RS. Mammalian sperm proteins are rapidly evolving: evidence of positive selection in functionally diverse genes. Molecular Biology and Evolution. 19: 1973-80. PMID 12411606  0.663
2000 Singh RS, Kulathinal RJ. Sex gene pool evolution and speciation: a new paradigm. Genes & Genetic Systems. 75: 119-30. PMID 10984836  0.604
2000 Kulathinal RJ, Singh RS. A biogeographic genetic approach for testing the role of reinforcement: the case of Drosophila pseudoobscura and D. persimilis. Evolution; International Journal of Organic Evolution. 54: 210-7. PMID 10937197  0.504
2000 Singh RS, Kulathinal RJ. Proceedings of Fukuoka International Symposium on Population Genetics: Sex gene pool evolution and speciation: A new paradigm Genes and Genetic Systems. 75: 119-130. DOI: 10.1266/ggs.75.119  0.547
2000 Kulathinal RJ, Singh RS. Reinforcement with gene flow? A reply Evolution. 54: 2176-2177.  0.457
1998 Kulathinal R, Singh RS. CYTOLOGICAL CHARACTERIZATION OF PREMEIOTIC VERSUS POSTMEIOTIC DEFECTS PRODUCING HYBRID MALE STERILITY AMONG SIBLING SPECIES OF THE DROSOPHILA MELANOGASTER COMPLEX. Evolution; International Journal of Organic Evolution. 52: 1067-1079. PMID 28565214 DOI: 10.1111/j.1558-5646.1998.tb01834.x  0.514
1998 Kulathinal R, Singh RS. Cytological characterization of premeiotic versus postmeiotic defects producing hybrid male sterility among sibling species of the Drosophila melanogaster complex Evolution. 52: 1067-1079.  0.444
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