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Tolga Can, Ph.D. - Publications

Affiliations: 
2004 University of California, Santa Barbara, Santa Barbara, CA, United States 
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Begik O, Oyken M, Cinkilli Alican T, Can T, Erson-Bensan AE. Alternative Polyadenylation Patterns for Novel Gene Discovery and Classification in Cancer. Neoplasia (New York, N.Y.). 19: 574-582. PMID 28624626 DOI: 10.1016/J.Neo.2017.04.008  0.317
2016 Tuncay EG, Can T. SUMONA: A supervised method for optimizing network alignment. Computational Biology and Chemistry. PMID 27177812 DOI: 10.1016/J.Compbiolchem.2016.03.003  0.34
2015 Budak G, Eren Ozsoy O, Aydin Son Y, Can T, Tuncbag N. Reconstruction of the temporal signaling network in Salmonella-infected human cells. Frontiers in Microbiology. 6: 730. PMID 26257716 DOI: 10.7490/F1000Research.1110034.1  0.301
2015 Krallinger M, Rabal O, Leitner F, Vazquez M, Salgado D, Lu Z, Leaman R, Lu Y, Ji D, Lowe DM, Sayle RA, Batista-Navarro RT, Rak R, Huber T, Rocktäschel T, ... ... Can T, et al. The CHEMDNER corpus of chemicals and drugs and its annotation principles. Journal of Cheminformatics. 7: S2. PMID 25810773 DOI: 10.1186/1758-2946-7-S1-S2  0.327
2014 Eser E, Can T, Ferhatosmanoğlu H. Div-BLAST: diversification of sequence search results. Plos One. 9: e115445. PMID 25531115 DOI: 10.1371/Journal.Pone.0115445  0.347
2014 Sahin ME, Can T, Son CD. GPCRsort-responding to the next generation sequencing data challenge: prediction of G protein-coupled receptor classes using only structural region lengths. Omics : a Journal of Integrative Biology. 18: 636-44. PMID 25133496 DOI: 10.1089/Omi.2014.0073  0.353
2014 Can T. Introduction to bioinformatics. Methods in Molecular Biology (Clifton, N.J.). 1107: 51-71. PMID 24272431 DOI: 10.1007/978-1-62703-748-8_4  0.41
2013 Ozsoy OE, Can T. A divide and conquer approach for construction of large-scale signaling networks from PPI and RNAi data using linear programming. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 10: 869-83. PMID 24334382 DOI: 10.1109/Tcbb.2013.80  0.311
2012 Hashemikhabir S, Ayaz ES, Kavurucu Y, Can T, Kahveci T. Large-scale signaling network reconstruction. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 9: 1696-708. PMID 23221085 DOI: 10.1109/Tcbb.2012.128  0.315
2009 Camoğlu O, Can T, Singh AK. Accurate and scalable techniques for the complex/pathway membership problem in protein networks. Advances in Bioinformatics. 787128. PMID 20182643 DOI: 10.1155/2009/787128  0.408
2009 Macropol K, Can T, Singh AK. RRW: repeated random walks on genome-scale protein networks for local cluster discovery. Bmc Bioinformatics. 10: 283. PMID 19740439 DOI: 10.1186/1471-2105-10-283  0.35
2009 Bayir MA, Guney TD, Can T. Integration of topological measures for eliminating non-specific interactions in protein interaction networks Discrete Applied Mathematics. 157: 2416-2424. DOI: 10.1016/J.Dam.2008.06.034  0.384
2008 Turanalp ME, Can T. Discovering functional interaction patterns in protein-protein interaction networks. Bmc Bioinformatics. 9: 276. PMID 18547430 DOI: 10.1186/1471-2105-9-276  0.34
2006 Can T, Chen CI, Wang YF. Efficient molecular surface generation using level-set methods. Journal of Molecular Graphics & Modelling. 25: 442-54. PMID 16621636 DOI: 10.1016/J.Jmgm.2006.02.012  0.604
2006 Camoglu O, Can T, Singh AK. Integrating multi-attribute similarity networks for robust representation of the protein space. Bioinformatics (Oxford, England). 22: 1585-92. PMID 16595556 DOI: 10.1093/Bioinformatics/Btl130  0.406
2005 Camoğlu O, Can T, Singh AK, Wang YF. Decision tree based information integration for automated protein classification. Journal of Bioinformatics and Computational Biology. 3: 717-42. PMID 16108091 DOI: 10.1142/S0219720005001259  0.537
2005 Can T, Orhan C, Singh AK. Analysis of protein-protein interaction networks using random walks Proceedings of the Acm Sigkdd International Conference On Knowledge Discovery and Data Mining. 61-68. DOI: 10.1145/1134030.1134042  0.312
2004 Can T, Camoğlu O, Singh AK, Wang YF. Automated protein classification using consensus decision. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 224-35. PMID 16448016  0.501
2004 Can T, Wang YF. Protein structure alignment and fast similarity search using local shape signatures. Journal of Bioinformatics and Computational Biology. 2: 215-39. PMID 15272439 DOI: 10.1142/S0219720004000533  0.558
2004 Bhattacharya A, Can T, Kahveci T, Singh AK, Wang YF. Progress: simultaneous searching of protein databases by sequence and structure. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 264-75. PMID 14992509  0.524
2003 Can T, Wang YF. CTSS: a robust and efficient method for protein structure alignment based on local geometrical and biological features. Proceedings / Ieee Computer Society Bioinformatics Conference. Ieee Computer Society Bioinformatics Conference. 2: 169-79. PMID 16452791 DOI: 10.1109/CSB.2003.1227316  0.529
2003 Can T, Wang Y, Wang YF, Su J. FPV: fast protein visualization using Java 3D. Bioinformatics (Oxford, England). 19: 913-22. PMID 12761052 DOI: 10.1093/Bioinformatics/Btg104  0.525
2003 Wang Y, Can T, Wang YF, Su J. Personalized annotation and information sharing in protein science with information-slips Proceedings of the Iasted International Conference On Information and Knowledge Sharing. 299-304.  0.463
2003 Can T, Wang Y, Wang YF, Su J. FPV: Fast protein visualization using Java 3D™ Proceedings of the Acm Symposium On Applied Computing. 88-95.  0.483
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