| Year |
Citation |
Score |
| 2009 |
Kahl BF, Paule MR. The use of diethyl pyrocarbonate and potassium permanganate as probes for strand separation and structural distortions in DNA. Methods in Molecular Biology (Clifton, N.J.). 543: 73-85. PMID 19378160 DOI: 10.1007/978-1-60327-015-1_6 |
0.435 |
|
| 2005 |
Gogain JC, Paule MR. The association of TIF-IA and polymerase I mediates promoter recruitment and regulation of ribosomal RNA transcription in Acanthamoeba castellanii. Gene Expression. 12: 259-71. PMID 16358415 DOI: 10.3727/000000005783991972 |
0.758 |
|
| 2005 |
Robinson MM, Yatherajam G, Ranallo RT, Bric A, Paule MR, Stargell LA. Mapping and functional characterization of the TAF11 interaction with TFIIA. Molecular and Cellular Biology. 25: 945-57. PMID 15657423 DOI: 10.1128/Mcb.25.3.945-957.2005 |
0.736 |
|
| 2004 |
Bric A, Radebaugh CA, Paule MR. Photocross-linking of the RNA polymerase I preinitiation and immediate postinitiation complexes: implications for promoter recruitment. The Journal of Biological Chemistry. 279: 31259-67. PMID 15161919 DOI: 10.1074/Jbc.M311828200 |
0.77 |
|
| 2002 |
Mcstay B, Paule MR, Schultz MC, Willis I, Pikaard CS. Oddpols united: New insights into transcription by RNA polymerases I and III Gene Expression. 10: 263-269. PMID 12450218 DOI: 10.3727/000000002783992415 |
0.58 |
|
| 2002 |
Marilley M, Radebaugh CA, Geiss GK, Laybourn PJ, Paule MR. DNA structural variation affects complex formation and promoter melting in ribosomal RNA transcription. Molecular Genetics and Genomics : Mgg. 267: 781-91. PMID 12207225 DOI: 10.1007/s00438-002-0708-z |
0.638 |
|
| 2002 |
Polakowski N, Paule MR. Purification and characterization of transcription factor IIIA from Acanthamoeba castellanii. Nucleic Acids Research. 30: 1977-84. PMID 11972335 DOI: 10.1093/Nar/30.9.1977 |
0.803 |
|
| 2002 |
Al-Khouri AM, Paule MR. A novel RNA polymerase I transcription initiation factor, TIF-IE, commits rRNA genes by interaction with TIF-IB, not by DNA binding. Molecular and Cellular Biology. 22: 750-61. PMID 11784852 DOI: 10.1128/Mcb.22.3.750-761.2002 |
0.79 |
|
| 2000 |
Kahl BF, Li H, Paule MR. DNA melting and promoter clearance by eukaryotic RNA polymerase I Journal of Molecular Biology. 299: 75-89. PMID 10860723 DOI: 10.1006/Jmbi.2000.3743 |
0.662 |
|
| 2000 |
Paule MR, White RJ. Transcription by RNA polymerases I and III Nucleic Acids Research. 28: 1283-1298. PMID 10684922 DOI: 10.1093/Nar/28.6.1283 |
0.603 |
|
| 1998 |
Radebaugh CA, Kubaska WM, Hoffman LH, Stiffler K, Paule MR. A novel transcription initiation factor (TIF), TIF-IE, is required for homogeneous Acanthamoeba castellanii TIF-IB (SL1) to form a committed complex Journal of Biological Chemistry. 273: 27708-27715. PMID 9765308 DOI: 10.1074/Jbc.273.42.27708 |
0.687 |
|
| 1997 |
Geiss GK, Radebaugh CA, Paule MR. The fundamental ribosomal RNA transcription initiation factor-IB (TIF- IB, SL1, factor D) binds to the rRNA core promoter primarily by minor groove contacts Journal of Biological Chemistry. 272: 29243-29254. PMID 9361004 DOI: 10.1074/Jbc.272.46.29243 |
0.633 |
|
| 1997 |
Radebaugh CA, Gong X, Bartholomew B, Paule MR. Identification of previously unrecognized common elements in eukaryotic promoters. A ribosomal RNA gene initiator element for RNA polymerase I Journal of Biological Chemistry. 272: 3141-3144. PMID 9013545 DOI: 10.1074/Jbc.272.6.3141 |
0.653 |
|
| 1995 |
Matthews JL, Zwick MG, Paule MR. Coordinate regulation of ribosomal component synthesis in Acanthamoeba castellanii: 5S RNA transcription is down regulated during encystment by alteration of TFIIIA activity. Molecular and Cellular Biology. 15: 3327-35. PMID 7760828 DOI: 10.1128/Mcb.15.6.3327 |
0.667 |
|
| 1995 |
Gong X, Radebaugh CA, Geiss GK, Simon MN, Paule MR. Site-directed photo-cross-linking of rRNA transcription initiation complexes Molecular and Cellular Biology. 15: 4956-4963. PMID 7651413 DOI: 10.1128/Mcb.15.9.4956 |
0.593 |
|
| 1995 |
Yang Q, Radebaugh CA, Kubaska W, Geiss GK, Paule MR. Acanthamoeba castellanii contains a ribosomal RNA enhancer binding protein which stimulates TIF-IB binding and transcription under stringent conditions Nucleic Acids Research. 23: 4345-4352. PMID 7501455 DOI: 10.1093/Nar/23.21.4345 |
0.648 |
|
| 1994 |
Radebaugh CA, Matthews JL, Geiss GK, Liu F, Wong JM, Bateman E, Camier S, Sentenac A, Paule MR. TATA box-binding protein (TBP) is a constituent of the polymerase I-specific transcription initiation factor TIF-IB (SL1) bound to the rRNA promoter and shows differential sensitivity to TBP-directed reagents in polymerase I, II, and III transcription factors. Molecular and Cellular Biology. 14: 597-605. PMID 8264628 DOI: 10.1128/Mcb.14.1.597 |
0.655 |
|
| 1994 |
Yang Q, Zwick MG, Paule MR. Sequence organization of the Acanthamoeba rrna intergenic spacer: Identification of transcriptional enhancers Nucleic Acids Research. 22: 4798-4805. PMID 7984432 DOI: 10.1093/Nar/22.22.4798 |
0.592 |
|
| 1993 |
Georgel P, Demeler B, Terpening C, Paule MR, Van Holde KE. Binding of the RNA polymerase I transcription complex to its promoter can modify positioning of downstream nucleosomes assembled in vitro Journal of Biological Chemistry. 268: 1947-1954. PMID 8420969 |
0.606 |
|
| 1993 |
Paule MR. Polymerase I transcription, termination, and processing Gene Expression. 3: 1-9. PMID 8099514 |
0.445 |
|
| 1993 |
Logquist AK, Li H, Lmboden M, Paule MR. Promoter opening (melting) and transcription initiation by RNA polymerase I requires neither nucleotide β, γ hydrolysis norprotein phosphorylation Nucleic Acids Research. 21: 3233-3238. PMID 7688114 DOI: 10.1093/Nar/21.14.3233 |
0.594 |
|
| 1992 |
Lida CT, Paule MR. Purification of components required for accurate transcription of ribosomal RNA from Acanthamoeba castellanii Nucleic Acids Research. 20: 3211-3221. PMID 1620619 DOI: 10.1093/Nar/20.12.3211 |
0.645 |
|
| 1992 |
Perna PJ, Harris GH, Iida CT, Kownin P, Bugren S, Paule MR. The start site of the Acanthamoeba castellanii ribosomal RNA transcription unit Gene Expression. 2: 71-78. PMID 1617304 |
0.553 |
|
| 1992 |
Imboden MA, Matthews JL, Lofquist AK, Paule MR. An exonuclease requiring an intact helical stem for specificity produces the 3' end of Acanthamoeba castellanii 5 S RNA. The Journal of Biological Chemistry. 267: 24601-10. PMID 1332962 |
0.471 |
|
| 1991 |
Zwick MG, Imboden MA, Paule MR. Specific transcription of an Acanthamoeba castellanii 5S RNA gene in homologous nuclear extracts Nucleic Acids Research. 19: 1681-1686. PMID 2027775 DOI: 10.1093/Nar/19.7.1681 |
0.626 |
|
| 1991 |
Paule MR, Bateman E, Hoffman L, Iida C, Imboden M, Kubaska W, Kownin P, Li H, Lofquist A, Risi P, Yang Q, Zwick M. Initiation and regulation mechanisms of ribosomal RNA transcription in the eukaryote Acanthamoeba castellanii Molecular and Cellular Biochemistry. 104: 119-126. PMID 1921990 DOI: 10.1007/Bf00229811 |
0.741 |
|
| 1991 |
Zwick MG, Wiggs M, Paule MR. Sequence and organization of 5S RNA genes from the eukaryotic protist Acanthamoeba castellanii Gene. 101: 153-157. PMID 1676384 DOI: 10.1016/0378-1119(91)90239-8 |
0.547 |
|
| 1988 |
Bateman E, Paule MR. Promoter occlusion during ribosomal RNA transcription Cell. 54: 985-992. PMID 3416358 DOI: 10.1016/0092-8674(88)90113-4 |
0.698 |
|
| 1988 |
Kownin P, Bateman E, Paule MR. Effects of single-base substitutions within the Acanthamoeba castellanii rRNA promoter on transcription and on binding of transcription initiation factor and RNA polymerase I Molecular and Cellular Biology. 8: 747-753. PMID 3352603 DOI: 10.1128/Mcb.8.2.747 |
0.647 |
|
| 1988 |
Bateman E, Paule MR. Events during eucaryotic rRNA transcription initiation and elongation: Conversion from the closed to the open promoter complex requires nucleotide substrates Molecular and Cellular Biology. 8: 1940-1946. PMID 3133551 DOI: 10.1128/Mcb.8.5.1940 |
0.702 |
|
| 1987 |
Kownin P, Bateman E, Paule MR. Eukaryotic RNA polymerase I promoter binding is directed by protein contacts with transcription initiation factor and is DNA sequence-independent Cell. 50: 693-699. PMID 3113736 DOI: 10.1016/0092-8674(87)90327-8 |
0.734 |
|
| 1986 |
Bateman E, Paule MR. Regulation of eukaryotic ribosomal RNA transcription by RNA polymerase modification Cell. 47: 445-450. PMID 3768960 DOI: 10.1016/0092-8674(86)90601-X |
0.73 |
|
| 1985 |
Bateman E, Iida CT, Kownin P, Paule MR. Footprinting of ribosomal RNA genes by transcription initiation factor and RNA polymerase I Proceedings of the National Academy of Sciences of the United States of America. 82: 8004-8008. PMID 3865211 DOI: 10.1073/Pnas.82.23.8004 |
0.744 |
|
| 1985 |
Iida CT, Kownin P, Paule MR. Ribosomal RNA transcription: Proteins and DNA sequences involved in preinitiation complex formation Proceedings of the National Academy of Sciences of the United States of America. 82: 1668-1672. PMID 3856847 DOI: 10.1073/Pnas.82.6.1668 |
0.743 |
|
| 1985 |
Kownin P, Lida CT, Brown-Shimer S, Paule MR. The ribosomal RNA promoter of Acanthamoeba castellanii determined by transcription in a cellfree system Nucleic Acids Research. 13: 6237-6248. PMID 2995922 DOI: 10.1093/Nar/13.17.6237 |
0.694 |
|
| 1984 |
Yung SG, Paule M, Beggs R, Greenberg E, Preiss J. Biosynthesis of bacterial glycogen: characterization of adenosine diphosphate glucose synthetases from Enterobacter hafniae and Aeromonas hydrophila. Archives of Microbiology. 138: 1-8. PMID 6331331 DOI: 10.1007/Bf00425398 |
0.376 |
|
| 1984 |
Paule MR, Iida CT, Perna PJ, Harris GH, Knoll DA, D'alessio JM. In vitro evidence that eukaryotic ribosomal RNA transcription is regulated by modification of RNA polymerase I Nucleic Acids Research. 12: 8161-8180. PMID 6095193 DOI: 10.1093/Nar/12.21.8161 |
0.632 |
|
| 1984 |
Paule MR, Iida CT, Perna PJ, Harris GH, Brown Shimer SL, Kownin P. Faithful initiation of ribosomal RNA transcription from cloned DNA by purified RNA polymerase I Biochemistry. 23: 4167-4172. PMID 6091740 DOI: 10.1021/Bi00313A025 |
0.673 |
|
| 1983 |
Paule MR. Regulation of ribosomal RNA transcription during differentiation of Acanthamoeba castellanii: A review Journal of Protozoology. 30: 211-214. PMID 6355452 DOI: 10.1111/J.1550-7408.1983.Tb02905.X |
0.62 |
|
| 1982 |
Grummt I, Roth E, Paule MR. Ribosomal RNA transcription in vitro is species specific Nature. 296: 173-174. PMID 7063022 DOI: 10.1038/296173A0 |
0.665 |
|
| 1981 |
D'Alessio JM, Harris GH, Perna PJ, Paule MR. Ribosomal ribonucleic acid repeat unit of Acanthamoeba castellanii: Cloning and restriction endonuclease map Biochemistry. 20: 3822-3827. PMID 6268147 DOI: 10.1021/Bi00516A024 |
0.514 |
|
| 1981 |
Paule MR. Comparative subunit composition of the eukaryotic nuclear RNA polymerases Trends in Biochemical Sciences. 6: 128-131. DOI: 10.1016/0968-0004(81)90048-7 |
0.579 |
|
| 1979 |
D'Alessio JM, Perna PJ, Paule MR. DNA-dependent RNA polymerases from Acanthamoeba castellanii. Comparative subunit structures of the homogeneous enzymes Journal of Biological Chemistry. 254: 11282-11287. PMID 500645 |
0.451 |
|
| 1979 |
Detke S, Paule MR. DNA-dependent RNA polymerase III from Acanthamoeba castellanii: Comparison of the catalytic properties of the trophozoite and cyst enzymes Journal of Protozoology. 26: 319-323. PMID 490436 DOI: 10.1111/J.1550-7408.1979.Tb02788.X |
0.57 |
|
| 1979 |
D'Alessio JM, Spindler SR, Paule MR. DNA-dependent RNA polymerase II from Acanthamoeba castellanii. Large scale preparation and subunit composition. The Journal of Biological Chemistry. 254: 4085-91. PMID 438176 |
0.437 |
|
| 1978 |
Detke S, Paule MR. DNA-dependent RNA polymerase II from Acanthamoeba castellanii Comparison of the catalytic properties and subunit architectures of the trophozoite and cyst enzymes Bba Section Nucleic Acids and Protein Synthesis. 520: 376-392. PMID 708741 DOI: 10.1016/0005-2787(78)90235-6 |
0.53 |
|
| 1978 |
Detke S, Paule MR. DNA-dependent RNA polymerases from Acanthamoeba castellanii. Multiple forms of the class III enzyme and levels of activity of the polymerase classes during encystment Bba Section Nucleic Acids and Protein Synthesis. 520: 131-138. PMID 698225 DOI: 10.1016/0005-2787(78)90014-X |
0.535 |
|
| 1978 |
Spindler SR, D'Alessio JM, Duester GL, Paule MR. DNA-dependent RNA polymerase III from Acanthamoeba castellanii. A rapid procedure for the large scale preparation of homogeneous enzyme. The Journal of Biological Chemistry. 253: 6242-8. PMID 681349 |
0.41 |
|
| 1978 |
Spindler SR, Duester GL, D'Alessio JM, Paule MR. A rapid and facile procedure for the preparation of RNA polymerase I from Acanthamoeba castellanii. Purification and subunit structure. The Journal of Biological Chemistry. 253: 4669-75. PMID 659440 |
0.361 |
|
| 1978 |
Detke S, Paule MR. DNA-dependent RNA polymerase I from Acanthamoeba castellanii: Comparison of the catalytic properties and subunit architectures of the trophozoite and cyst enzymes Archives of Biochemistry and Biophysics. 185: 333-343. PMID 626499 DOI: 10.1016/0003-9861(78)90175-3 |
0.5 |
|
| 1975 |
Detke S, Paule MR. DNA-dependent RNA polymerases from Acanthamoeba castellanii: Properties and levels of activity during encystment Bba Section Nucleic Acids and Protein Synthesis. 383: 67-77. PMID 1122326 DOI: 10.1016/0005-2787(75)90246-4 |
0.535 |
|
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