| Year |
Citation |
Score |
| 2023 |
Meltzer AC, Wargowsky RS, Moran S, Jordan T, Toma I, Jepson T, Shu S, Ma Y, McCaffrey TA. Publisher Correction: Diagnostic accuracy of novel mRNA blood biomarkers of infection to predict outcomes in emergency department patients with undifferentiated abdominal pain. Scientific Reports. 13: 21991. PMID 38081903 DOI: 10.1038/s41598-023-48752-8 |
0.678 |
|
| 2023 |
McCaffrey TA, Toma I, Yang Z, Katz R, Reiner J, Mazhari R, Shah P, Falk Z, Wargowsky R, Goldman J, Jones D, Shtokalo D, Antonets D, Jepson T, Fetisova A, et al. RNAseq profiling of blood from patients with coronary artery disease: Signature of a T cell imbalance. Journal of Molecular and Cellular Cardiology Plus. 4. PMID 37303712 DOI: 10.1016/j.jmccpl.2023.100033 |
0.695 |
|
| 2023 |
Meltzer AC, Wargowsky RS, Moran S, Jordan T, Toma I, Jepson T, Shu S, Ma Y, McCaffrey TA. Diagnostic accuracy of novel mRNA blood biomarkers of infection to predict outcomes in emergency department patients with undifferentiated abdominal pain. Scientific Reports. 13: 2297. PMID 36759691 DOI: 10.1038/s41598-023-29385-3 |
0.681 |
|
| 2022 |
Wargodsky R, Dela Cruz P, LaFleur J, Yamane D, Kim JS, Benjenk I, Heinz E, Irondi OO, Farrar K, Toma I, Jordan T, Goldman J, McCaffrey TA. RNA Sequencing in COVID-19 patients identifies neutrophil activation biomarkers as a promising diagnostic platform for infections. Plos One. 17: e0261679. PMID 35081105 DOI: 10.1371/journal.pone.0261679 |
0.708 |
|
| 2021 |
St Laurent G, Toma I, Seilheimer B, Cesnulevicius K, Schultz M, Tackett M, Zhou J, Ri M, Shtokalo D, Antonets D, Jepson T, McCaffrey TA. RNAseq analysis of treatment-dependent signaling changes during inflammation in a mouse cutaneous wound healing model. Bmc Genomics. 22: 854. PMID 34823472 DOI: 10.1186/s12864-021-08083-2 |
0.687 |
|
| 2021 |
McCaffrey TA, Toma I, Yang Z, Katz R, Reiner J, Mazhari R, Shah P, Tackett M, Jones D, Jepson T, Falk Z, Wargodsky R, Shtakalo D, Antonets D, Ertle J, et al. RNA sequencing of blood in coronary artery disease: involvement of regulatory T cell imbalance. Bmc Medical Genomics. 14: 216. PMID 34479557 DOI: 10.1186/s12920-021-01062-2 |
0.699 |
|
| 2018 |
Hahn A, Bendall ML, Gibson KM, Chaney H, Sami I, Perez GF, Koumbourlis AC, McCaffrey TA, Freishtat RJ, Crandall KA. Benchmark Evaluation of True Single Molecular Sequencing to Determine Cystic Fibrosis Airway Microbiome Diversity. Frontiers in Microbiology. 9: 1069. PMID 29887843 DOI: 10.3389/Fmicb.2018.01069 |
0.31 |
|
| 2018 |
Laurent GS, Toma I, Tackett M, Zhou J, Ri M, Shtokalo D, Vyatkin Y, Jepson T, Cesnulevicius K, Seilheimer B, Mccaffrey T. AB0080 Differential effects of tr14 versus diclofenac on pro-resolving lipid mediators revealed by rnaseq Annals of the Rheumatic Diseases. 77: 1237-1238. DOI: 10.1136/Annrheumdis-2018-Eular.3789 |
0.719 |
|
| 2018 |
Laurent GS, Toma I, Seilheimer B, Tackett M, Zhou J, Ri M, Shtokalo D, Vyatkin Y, Jepson T, Cesnulevicius K, Mccaffrey T. THU0021 Differential effects of tr14 versus diclofenac on cox/lox pathways revealed by rnaseq Annals of the Rheumatic Diseases. 77: 238-239. DOI: 10.1136/Annrheumdis-2018-Eular.3779 |
0.72 |
|
| 2017 |
St Laurent G, Seilheimer B, Tackett M, Zhou J, Shtokalo D, Vyatkin Y, Ri M, Toma I, Jones D, McCaffrey TA. Deep Sequencing Transcriptome Analysis of Murine Wound Healing: Effects of a Multicomponent, Multitarget Natural Product Therapy-Tr14. Frontiers in Molecular Biosciences. 4: 57. PMID 28879183 DOI: 10.3389/Fmolb.2017.00057 |
0.711 |
|
| 2017 |
Zhang JW, Liu TF, Chen XH, Liang WY, Feng XR, Wang L, Fu SW, McCaffrey TA, Liu ML. Validation of aspirin response-related transcripts in patients with coronary artery disease and preliminary investigation on CMTM5 function. Gene. PMID 28457985 DOI: 10.1016/J.Gene.2017.04.041 |
0.344 |
|
| 2017 |
Lai Y, Zhang F, Nayak TK, Modarres R, Lee NH, McCaffrey TA. Detecting discordance enrichment among a series of two-sample genome-wide expression data sets. Bmc Genomics. 18: 1050. PMID 28198679 DOI: 10.1186/S12864-016-3265-2 |
0.324 |
|
| 2017 |
Lai Y, Zhang F, Nayak TK, Modarres R, Lee NH, McCaffrey TA. An efficient concordant integrative analysis of multiple large-scale two-sample expression data sets. Bioinformatics (Oxford, England). PMID 28174897 DOI: 10.1093/Bioinformatics/Btx061 |
0.315 |
|
| 2017 |
Laurent G, Seilheimer B, Tackett M, Zhou J, Shtokalo D, Vyatkin Y, Kapranov P, Toma I, Mccaffrey T. THU0007 Deep sequencing transcriptome analysis of the effect of traumeel versus diclofenac therapeutic action in wound healing Annals of the Rheumatic Diseases. 76: 202-202. DOI: 10.1136/Annrheumdis-2017-Eular.4964 |
0.351 |
|
| 2016 |
Chawla LS, Toma I, Davison D, Vaziri K, Lee J, Lucas R, Seneff MG, Nyhan A, McCaffrey TA. Acute appendicitis: transcript profiling of blood identifies promising biomarkers and potential underlying processes. Bmc Medical Genomics. 9: 40. PMID 27417541 DOI: 10.1186/S12920-016-0200-Y |
0.711 |
|
| 2016 |
Hilton SK, Castro-Nallar E, Pérez-Losada M, Toma I, McCaffrey TA, Hoffman EP, Siegel MO, Simon GL, Johnson WE, Crandall KA. Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology. Frontiers in Microbiology. 7: 484. PMID 27092134 DOI: 10.3389/Fmicb.2016.00484 |
0.707 |
|
| 2016 |
Laurent GS, Vyatkin Y, Antonets D, Ri M, Qi Y, Saik O, Shtokalo D, de Hoon MJ, Kawaji H, Itoh M, Lassmann T, Arner E, Forrest AR, Nicolas E, ... McCaffrey TA, et al. Functional annotation of the vlinc class of non-coding RNAs using systems biology approach. Nucleic Acids Research. PMID 27001520 DOI: 10.1093/Nar/Gkw162 |
0.347 |
|
| 2014 |
Callier SL, Toma I, McCaffrey T, Harralson AF, O'Brien TJ. Engaging the next generation of healthcare professionals in genomics: planning for the future. Personalized Medicine. 11: 89-98. PMID 29751387 DOI: 10.2217/Pme.13.99 |
0.705 |
|
| 2014 |
Toma I, Siegel MO, Keiser J, Yakovleva A, Kim A, Davenport L, Devaney J, Hoffman EP, Alsubail R, Crandall KA, Castro-Nallar E, Pérez-Losada M, Hilton SK, Chawla LS, McCaffrey TA, et al. Single-molecule long-read 16S sequencing to characterize the lung microbiome from mechanically ventilated patients with suspected pneumonia. Journal of Clinical Microbiology. 52: 3913-21. PMID 25143582 DOI: 10.1128/Jcm.01678-14 |
0.709 |
|
| 2014 |
Byrd AL, Perez-Rogers JF, Manimaran S, Castro-Nallar E, Toma I, McCaffrey T, Siegel M, Benson G, Crandall KA, Johnson WE. Clinical PathoScope: rapid alignment and filtration for accurate pathogen identification in clinical samples using unassembled sequencing data. Bmc Bioinformatics. 15: 262. PMID 25091138 DOI: 10.1186/1471-2105-15-262 |
0.712 |
|
| 2014 |
Callier SL, Toma I, McCaffrey T, Harralson AF, O'Brien TJ. Engaging the next generation of healthcare professionals in genomics: Planning for the future Personalized Medicine. 11: 89-98. DOI: 10.2217/pme.13.99 |
0.691 |
|
| 2013 |
St Laurent G, Shtokalo D, Dong B, Tackett MR, Fan X, Lazorthes S, Nicolas E, Sang N, Triche TJ, McCaffrey TA, Xiao W, Kapranov P. VlincRNAs controlled by retroviral elements are a hallmark of pluripotency and cancer. Genome Biology. 14: R73. PMID 23876380 DOI: 10.1186/Gb-2013-14-7-R73 |
0.34 |
|
| 2013 |
McCaffrey TA, Tziros C, Lewis J, Katz R, Siegel R, Weglicki W, Kramer J, Mak IT, Toma I, Chen L, Benas E, Lowitt A, Rao S, Witkin L, Lian Y, et al. Genomic profiling reveals the potential role of TCL1A and MDR1 deficiency in chemotherapy-induced cardiotoxicity. International Journal of Biological Sciences. 9: 350-60. PMID 23630447 DOI: 10.7150/Ijbs.6058 |
0.71 |
|
| 2013 |
St Laurent G, Shtokalo D, Tackett MR, Yang Z, Vyatkin Y, Milos PM, Seilheimer B, McCaffrey TA, Kapranov P. On the importance of small changes in RNA expression. Methods (San Diego, Calif.). 63: 18-24. PMID 23563143 DOI: 10.1016/J.Ymeth.2013.03.027 |
0.386 |
|
| 2013 |
Fallahi P, Katz R, Toma I, Li R, Reiner J, VanHouten K, Carpio L, Marshall L, Lian Y, Bupp S, Fu SW, Rickles F, Leitenberg D, Lai Y, Weksler BB, ... ... McCaffrey TA, et al. Aspirin insensitive thrombophilia: transcript profiling of blood identifies platelet abnormalities and HLA restriction. Gene. 520: 131-8. PMID 23454623 DOI: 10.1016/J.Gene.2013.02.032 |
0.703 |
|
| 2013 |
Laurent GS, Tackett M, McCaffrey T, Kapranov P. THU0016 Deep Sequencing Transcriptome Analysis of Traumeel Therapeutic Action in Wound Healing Annals of the Rheumatic Diseases. 72. DOI: 10.1136/Annrheumdis-2013-Eular.544 |
0.384 |
|
| 2012 |
St Laurent G, Shtokalo D, Tackett MR, Yang Z, Eremina T, Wahlestedt C, Urcuqui-Inchima S, Seilheimer B, McCaffrey TA, Kapranov P. Intronic RNAs constitute the major fraction of the non-coding RNA in mammalian cells. Bmc Genomics. 13: 504. PMID 23006825 DOI: 10.1186/1471-2164-13-504 |
0.333 |
|
| 2012 |
Toma I, McCaffrey TA. Transforming growth factor-β and atherosclerosis: interwoven atherogenic and atheroprotective aspects. Cell and Tissue Research. 347: 155-75. PMID 21626289 DOI: 10.1007/S00441-011-1189-3 |
0.696 |
|
| 2011 |
Toma I, St Laurent G, McCaffrey TA. Toward knowing the whole human: next-generation sequencing for personalized medicine. Personalized Medicine. 8: 483-491. PMID 29783338 DOI: 10.2217/Pme.11.27 |
0.723 |
|
| 2011 |
Zhaorigetu S, Yang Z, Toma I, McCaffrey TA, Hu CA. Apolipoprotein L6, induced in atherosclerotic lesions, promotes apoptosis and blocks Beclin 1-dependent autophagy in atherosclerotic cells. The Journal of Biological Chemistry. 286: 27389-98. PMID 21646352 DOI: 10.1074/Jbc.M110.210245 |
0.7 |
|
| 2011 |
Toma I, St. Laurent G, McCaffrey TA. Toward knowing the whole human: Next-generation sequencing for personalized medicine Personalized Medicine. 8: 483-491. DOI: 10.2217/pme.11.27 |
0.71 |
|
| 2011 |
McCaffrey T, Tziros C, Lewis J, Siegel R, Katz R, Fu S, Toma I. GENOMIC ANALYSIS OF CHEMOTHERAPY-INDUCED CARDIOTOXICITY SUGGESTS A POSSIBLE ROLE OF SUPPRESSION OF THE TCL1A/AKT ANTI-APOPTOTIC PATHWAY Journal of the American College of Cardiology. 57: E253. DOI: 10.1016/S0735-1097(11)60253-2 |
0.713 |
|
| 2009 |
Yang Z, Gagarin D, St Laurent G, Hammell N, Toma I, Hu CA, Iwasa A, McCaffrey TA. Cardiovascular inflammation and lesion cell apoptosis: a novel connection via the interferon-inducible immunoproteasome. Arteriosclerosis, Thrombosis, and Vascular Biology. 29: 1213-9. PMID 19443843 DOI: 10.1161/Atvbaha.109.189407 |
0.705 |
|
| 2009 |
Heydarian M, McCaffrey T, Florea L, Yang Z, Ross MM, Zhou W, Maynard SE. Novel splice variants of sFlt1 are upregulated in preeclampsia. Placenta. 30: 250-255. PMID 19147226 DOI: 10.1016/J.Placenta.2008.12.010 |
0.3 |
|
| 2007 |
Klase Z, Kale P, Winograd R, Gupta MV, Heydarian M, Berro R, McCaffrey T, Kashanchi F. HIV-1 TAR element is processed by Dicer to yield a viral micro-RNA involved in chromatin remodeling of the viral LTR. Bmc Molecular Biology. 8: 63. PMID 17663774 DOI: 10.1186/1471-2199-8-63 |
0.313 |
|
| 2005 |
Cahan P, Ahmad AM, Burke H, Fu S, Lai Y, Florea L, Dharker N, Kobrinski T, Kale P, McCaffrey TA. List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists. Gene. 360: 78-82. PMID 16140476 DOI: 10.1016/J.Gene.2005.07.008 |
0.318 |
|
| 2005 |
Gagarin D, Yang Z, Butler J, Wimmer M, Du B, Cahan P, McCaffrey TA. Genomic profiling of acquired resistance to apoptosis in cells derived from human atherosclerotic lesions: potential role of STATs, cyclinD1, BAD, and Bcl-XL. Journal of Molecular and Cellular Cardiology. 39: 453-65. PMID 16005468 DOI: 10.1016/J.Yjmcc.2005.01.015 |
0.314 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2007 |
Mody M, Dharker N, Bloomston M, Wang PS, Chou FS, Glickman TS, McCaffrey T, Yang Z, Pumfery A, Lee D, Ringel MD, Pinzone JJ. Rosiglitazone sensitizes MDA-MB-231 breast cancer cells to anti-tumour effects of tumour necrosis factor-alpha, CH11 and CYC202. Endocrine-Related Cancer. 14: 305-15. PMID 17639046 DOI: 10.1677/Erc-06-0003 |
0.299 |
|
| 2013 |
Voora D, Cyr D, Lucas J, Chi JT, Dungan J, McCaffrey TA, Katz R, Newby LK, Kraus WE, Becker RC, Ortel TL, Ginsburg GS. Aspirin exposure reveals novel genes associated with platelet function and cardiovascular events. Journal of the American College of Cardiology. 62: 1267-76. PMID 23831034 DOI: 10.1016/J.Jacc.2013.05.073 |
0.298 |
|
| 2007 |
Yang Z, Gagarin D, Ramezani A, Hawley RG, McCaffrey TA. Resistance to fas-induced apoptosis in cells from human atherosclerotic lesions: elevated Bcl-XL inhibits apoptosis and caspase activation. Journal of Vascular Research. 44: 483-94. PMID 17657164 DOI: 10.1159/000106466 |
0.294 |
|
| 2015 |
Liu T, Zhang J, Chen X, Feng X, Fu SW, McCaffrey TA, Liu M. Comparison between urinary 11-dehydrothromboxane B2 detection and platelet Light Transmission Aggregometry (LTA) assays for evaluating aspirin response in elderly patients with coronary artery disease. Gene. PMID 26095809 DOI: 10.1016/J.Gene.2015.06.045 |
0.291 |
|
| 2011 |
Dwivedi RS, Herman JG, McCaffrey TA, Raj DS. Beyond genetics: epigenetic code in chronic kidney disease. Kidney International. 79: 23-32. PMID 20881938 DOI: 10.1038/Ki.2010.335 |
0.283 |
|
| 2007 |
Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent G, McCaffrey TA. Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization. Gene. 401: 12-8. PMID 17651921 DOI: 10.1016/J.Gene.2007.06.016 |
0.283 |
|
| 2003 |
Marko NF, Dieffenbach PB, Yan G, Ceryak S, Howell RW, McCaffrey TA, Hu VW. Does metabolic radiolabeling stimulate the stress response? Gene expression profiling reveals differential cellular responses to internal beta vs. external gamma radiation. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 17: 1470-86. PMID 12890701 DOI: 10.1096/Fj.02-1194Com |
0.278 |
|
| 2010 |
St Laurent G, Hammell N, McCaffrey TA. A LINE-1 component to human aging: do LINE elements exact a longevity cost for evolutionary advantage? Mechanisms of Ageing and Development. 131: 299-305. PMID 20346965 DOI: 10.1016/J.Mad.2010.03.008 |
0.278 |
|
| 2014 |
Lai Y, Zhang F, Nayak TK, Modarres R, Lee NH, McCaffrey TA. Concordant integrative gene set enrichment analysis of multiple large-scale two-sample expression data sets. Bmc Genomics. 15: S6. PMID 24564564 DOI: 10.1186/1471-2164-15-S1-S6 |
0.276 |
|
| 2017 |
Zhang JW, Liu WW, McCaffrey TA, He XQ, Liang WY, Chen XH, Feng XR, Fu SW, Liu ML. Predictors of high on-aspirin platelet reactivity in elderly patients with coronary artery disease. Clinical Interventions in Aging. 12: 1271-1279. PMID 28848334 DOI: 10.2147/Cia.S138592 |
0.271 |
|
| 2009 |
Klase Z, Winograd R, Davis J, Carpio L, Hildreth R, Heydarian M, Fu S, McCaffrey T, Meiri E, Ayash-Rashkovsky M, Gilad S, Bentwich Z, Kashanchi F. HIV-1 TAR miRNA protects against apoptosis by altering cellular gene expression. Retrovirology. 6: 18. PMID 19220914 DOI: 10.1186/1742-4690-6-18 |
0.265 |
|
| 2004 |
Abuljadayel IS, Afghan RK, McCaffrey TA, Lundergan C, Hawley TS, Hawley RG, Dhoot GJ. SCID repopulating cells derived from unmobilised adult human peripheral blood. Current Medical Research and Opinion. 20: 87-100. PMID 14741077 DOI: 10.1185/030079903125002766 |
0.263 |
|
| 2010 |
Fu Y, Lian Y, Kim KS, Zhang L, Hindle AK, Brody F, Siegel RS, McCaffrey TA, Fu SW. BP1 Homeoprotein Enhances Metastatic Potential in ER-negative Breast Cancer. Journal of Cancer. 1: 54-62. PMID 20842225 DOI: 10.7150/Jca.1.54 |
0.262 |
|
| 2015 |
Goldman AW, Burmeister Y, Cesnulevicius K, Herbert M, Kane M, Lescheid D, McCaffrey T, Schultz M, Seilheimer B, Smit A, St Laurent G, Berman B. Bioregulatory systems medicine: an innovative approach to integrating the science of molecular networks, inflammation, and systems biology with the patient's autoregulatory capacity? Frontiers in Physiology. 6: 225. PMID 26347656 DOI: 10.3389/Fphys.2015.00225 |
0.258 |
|
| 2004 |
Bonecini-Almeida MG, Ho JL, Boéchat N, Huard RC, Chitale S, Doo H, Geng J, Rego L, Lazzarini LC, Kritski AL, Johnson WD, McCaffrey TA, Silva JR. Down-modulation of lung immune responses by interleukin-10 and transforming growth factor beta (TGF-beta) and analysis of TGF-beta receptors I and II in active tuberculosis. Infection and Immunity. 72: 2628-34. PMID 15102771 DOI: 10.1128/Iai.72.5.2628-2634.2004 |
0.248 |
|
| 2009 |
McCaffrey TA. TGF-beta signaling in atherosclerosis and restenosis. Frontiers in Bioscience (Scholar Edition). 1: 236-45. PMID 19482699 DOI: 10.2741/S23 |
0.245 |
|
| 2009 |
Heydarian M, McCaffrey T, Florea L, Yang Z, Ross M, Zhou W, Maynard S. Corrigendum to “Novel Splice Variants of sFlt1 are Upregulated in Preeclampsia [Placenta 30 (3) (2009) 250–255]” Placenta. 30: 377. DOI: 10.1016/J.Placenta.2009.02.003 |
0.239 |
|
| 2009 |
Hindle AK, Brody F, Tevar R, Kluk B, Hill S, McCaffrey T, Fu S. TCF7L2 expression in diabetic patients undergoing bariatric surgery. Surgical Endoscopy. 23: 700-4. PMID 18806947 DOI: 10.1007/S00464-008-0001-2 |
0.236 |
|
| 2013 |
Chen L, Li Y, Fu Y, Peng J, Mo MH, Stamatakos M, Teal CB, Brem RF, Stojadinovic A, Grinkemeyer M, McCaffrey TA, Man YG, Fu SW. Role of deregulated microRNAs in breast cancer progression using FFPE tissue. Plos One. 8: e54213. PMID 23372687 DOI: 10.1371/Journal.Pone.0054213 |
0.236 |
|
| 2010 |
Kirkel D, Lin TW, Fu SW, Dlott JS, Sahud MA, McCaffrey T, Rickles FR. Asymptomatic factor VII deficiency: gene analysis and structure-function relationships. Blood Coagulation & Fibrinolysis : An International Journal in Haemostasis and Thrombosis. 21: 91-4. PMID 20040857 DOI: 10.1097/Mbc.0B013E328331E708 |
0.235 |
|
| 1987 |
NICHOLSON A, MCCAFFREY T, WEKSLER B, HAJJAR D. TGF-β increases C-SIS mRNA in endothelial cells and stimulates the production of EC-derived mitogens for smooth muscle cells Journal of Molecular and Cellular Cardiology. 19: S2-S2. DOI: 10.1016/S0022-2828(87)80631-4 |
0.234 |
|
| 2012 |
Chen L, Wang M, Peng J, Teal C, Stamatakos M, McCaffrey T, Fu SW. Abstract 5031: miR-21 targets TGF-β Pathway in breast cancer Cancer Research. 72: 5031-5031. DOI: 10.1158/1538-7445.Am2012-5031 |
0.229 |
|
| 2002 |
Faisal Khan KM, Laurie GW, McCaffrey TA, Falcone DJ. Exposure of cryptic domains in the alpha 1-chain of laminin-1 by elastase stimulates macrophages urokinase and matrix metalloproteinase-9 expression. The Journal of Biological Chemistry. 277: 13778-86. PMID 11827968 DOI: 10.1074/Jbc.M111290200 |
0.228 |
|
| 2012 |
Musunuru K, Roden DM, Boineau R, Bristow MR, McCaffrey TA, Newton-Cheh C, Paltoo DN, Rosenberg Y, Wohlgemuth JG, Zineh I, Hasan AA. Cardiovascular pharmacogenomics: current status and future directions-report of a national heart, lung, and blood institute working group. Journal of the American Heart Association. 1: e000554. PMID 23130127 DOI: 10.1161/Jaha.111.000554 |
0.222 |
|
| 2010 |
Kluk BJ, Fu Y, Formolo TA, Zhang L, Hindle AK, Man YG, Siegel RS, Berg PE, Deng C, McCaffrey TA, Fu SW. BP1, an isoform of DLX4 homeoprotein, negatively regulates BRCA1 in sporadic breast cancer. International Journal of Biological Sciences. 6: 513-24. PMID 20877436 DOI: 10.7150/Ijbs.6.513 |
0.208 |
|
| 2000 |
McCaffrey TA, Fu C, Du B, Eksinar S, Kent KC, Harry B, Kreiger K, Rosengart T, Cybulsky MI, Silverman ES, Collins T. High-level expression of Egr-1 and Egr-1-inducible genes in mouse and human atherosclerosis Journal of Clinical Investigation. 105: 653-662. PMID 10712437 |
0.192 |
|
| 2007 |
Yang Z, Gagarin D, Ramezani A, Rahman A, Schæbel LH, Chen H, Rasmussen CV, Aalkjær C, Buus CL, Mulvany MJ, Chen C, Eftekhari A, Cario-Toumaniantz C, Boularan C, Schurgers LJ, ... ... McCaffrey TA, et al. Contents Vol. 44, 2007 Journal of Vascular Research. 44: 522-524. DOI: 10.1159/000110049 |
0.185 |
|
| 2007 |
Yang Z, Gagarin D, Ramezani A, Rahman A, Schæbel LH, Chen H, Rasmussen CV, Aalkjær C, Buus CL, Mulvany MJ, Chen C, Eftekhari A, Cario-Toumaniantz C, Boularan C, Schurgers LJ, ... ... McCaffrey TA, et al. Subject Index Vol. 44, 2007 Journal of Vascular Research. 44: 520-521. DOI: 10.1159/000110046 |
0.18 |
|
| 2004 |
Yang Z, Gagarin D, Ramezani A, Rahman A, Schæbel LH, Chen H, Rasmussen CV, Aalkjær C, Buus CL, Mulvany MJ, Chen C, Eftekhari A, Cario-Toumaniantz C, Boularan C, Schurgers LJ, ... ... McCaffrey TA, et al. Thanks to the Reviewers Journal of Vascular Research. 44: 515-517. DOI: 10.1159/000110045 |
0.178 |
|
| 2000 |
Du B, Fu C, Kent KC, Bush H, Schulick AH, Kreiger K, Collins T, McCaffrey TA. Elevated Egr-1 in human atherosclerotic cells transcriptionally represses the transforming growth factor-β Type II receptor Journal of Biological Chemistry. 275: 39039-39047. PMID 10982796 DOI: 10.1074/jbc.M005159200 |
0.148 |
|
| 1991 |
Falcone DJ, McCaffrey TA, Vergiliot JA. Stimulation of macrophage urokinase expression by polyanions is protein kinase C-dependent and requires protein and RNA synthesis Journal of Biological Chemistry. 266: 22726-22732. PMID 1658006 |
0.146 |
|
| 2000 |
Batuman O, Akman HO, McCaffrey TA, Zhang H, Siddiqui MAQ, Smith ELP. Response to hypoxia involves smad proteins in human endothelial cells Blood. 96. |
0.141 |
|
| 1999 |
Bray PJ, Du B, Mejia VM, Hao SC, Deutsch E, Fu C, Wilson RC, Hanauske-Abel H, McCaffrey TA. Glucocorticoid resistance caused by reduced expression of the glucocorticoid receptor in cells from human vascular lesions. Arteriosclerosis, Thrombosis, and Vascular Biology. 19: 1180-9. PMID 10323768 |
0.138 |
|
| 2000 |
Wang S, Bray P, McCaffrey T, March K, Hempstead BL, Kraemer R. p75(NTR) mediates neurotrophin-induced apoptosis of vascular smooth muscle cells. The American Journal of Pathology. 157: 1247-58. PMID 11021829 DOI: 10.1016/S0002-9440(10)64640-8 |
0.137 |
|
| 1995 |
McCaffrey TA, Pomerantz KB, Sanborn TA, Spokojny AM, Du B, Park MH, Folk JE, Lamberg A, Kivirikko KI, Falcone DJ, Mehta SB, Hanauske-Abel HM. Specific inhibition of eIF-5A and collagen hydroxylation by a single agent: Antiproliferative and fibrosuppressive effects on smooth muscle cells from human coronary arteries Journal of Clinical Investigation. 95: 446-455. PMID 7860726 |
0.137 |
|
| 1997 |
McCaffrey TA, Du B, Consigli S, Szabo P, Bray PJ, Hartner L, Weksler BB, Sanborn TA, Bergman G, Bush HL. Genomic instability in the type II TGF-β1 receptor gene in atherosclerotic and restenotic vascular cells Journal of Clinical Investigation. 100: 2182-2188. PMID 9410894 |
0.134 |
|
| 2020 |
McCaffrey TA, St Laurent G, Shtokalo D, Antonets D, Vyatkin Y, Jones D, Battison E, Nigg JT. Biomarker discovery in attention deficit hyperactivity disorder: RNA sequencing of whole blood in discordant twin and case-controlled cohorts. Bmc Medical Genomics. 13: 160. PMID 33115496 DOI: 10.1186/s12920-020-00808-8 |
0.129 |
|
| 1988 |
McCaffrey TA, Nicholson AC, Szabo PE, Weksler ME, Weksler BB. Aging and arteriosclerosis. The increased proliferation of arterial smooth muscle cells isolated from old rats is associated with increased platelet-derived growth factor-like activity Journal of Experimental Medicine. 167: 163-174. PMID 3335829 |
0.124 |
|
| 2000 |
McCaffrey TA. TGF-βs and TGF-β receptors in atherosclerosis Cytokine and Growth Factor Reviews. 11: 103-114. PMID 10708958 DOI: 10.1016/S1359-6101(99)00034-9 |
0.12 |
|
| 2000 |
Yan Z, Subbaramaiah K, Camilli T, Zhang F, Tanabe T, McCaffrey TA, Dannenberg AJ, Weksler BB. Benzo[a]pyrene induces the transcription of cyclooxygenase-2 in vascular smooth muscle cells. Evidence for the involvement of extracellular signal- regulated kinase and NF-κB Journal of Biological Chemistry. 275: 4949-4955. PMID 10671533 DOI: 10.1074/jbc.275.7.4949 |
0.117 |
|
| 1993 |
Falcone DJ, McCaffrey TA, Haimovitz-Friedman A, Vergilio JA, Nicholson AC. Macrophage and foam cell release of matrix-bound growth factors: Role of plasminogen activation Journal of Biological Chemistry. 268: 11951-11958. PMID 8505319 |
0.115 |
|
| 1999 |
McCaffrey TA, Du B, Fu C, Bray PJ, Sanborn TA, Deutsch E, Tarazona N, Shaknovitch A, Newman G, Patterson C, Bush HL. The expression of TGF-β receptors in human atherosclerosis: Evidence for acquired resistance to apoptosis due to receptor imbalance Journal of Molecular and Cellular Cardiology. 31: 1627-1642. PMID 10471347 DOI: 10.1006/jmcc.1999.0999 |
0.114 |
|
| 1992 |
McCaffrey TA, Falcone DJ, Borth W, Brayton CF, Weksler BB. Fucoidan is a non-anticoagulant inhibitor of intimal hyperplasia Biochemical and Biophysical Research Communications. 184: 773-781. PMID 1315533 DOI: 10.1016/0006-291X(92)90657-7 |
0.11 |
|
| 2000 |
Kaiura TL, Itoh H, Kubaska SM, McCaffrey TA, Liu B, Kent KC. The effect of growth factors, cytokines, and extracellular matrix proteins on fibronectin production in human vascular smooth muscle cells Journal of Vascular Surgery. 31: 577-584. PMID 10709072 |
0.11 |
|
| 1996 |
Leng L, Du B, Consigli S, McCaffrey TA. Translocation of protein kinase C-δ by PDGF in cultured vascular smooth muscle cells: Inhibition by TGF-β1 Artery. 22: 140-154. PMID 8893972 |
0.108 |
|
| 1993 |
Falcone DJ, McCaffrey TA, Haimovitz-Friedman A, Garcia M. Transforming growth factor-β1 stimulates macrophage urokinase expression and release of matrix-bound basic fibroblast growth factor Journal of Cellular Physiology. 155: 595-605. PMID 7684044 |
0.107 |
|
| 1995 |
McCaffrey TA, Consigli S, Du B, Falcone DJ, Sanborn TA, Spokojny AM, Bush HL. Decreased type II/type I TGF-β receptor ratio in cells derived from human atherosclerotic lesions: Conversion from an antiproliferative to profibrotic response to TGF-β1 Journal of Clinical Investigation. 96: 2667-2675. PMID 8675633 |
0.101 |
|
| 1995 |
Donovan MJ, Miranda RC, Kraemer R, McCaffrey TA, Tessarollo L, Mahadeo D, Sharif S, Kaplan DR, Tsoulfas P, Parada L. Neurotrophin and neurotrophin receptors in vascular smooth muscle cells. Regulation of expression in response to injury. The American Journal of Pathology. 147: 309-24. PMID 7639328 |
0.098 |
|
| 1995 |
Falcone DJ, McCaffrey TA, Mathew J, McAdam K, Borth W. THP-1 macrophage membrane-bound plasmin activity is up-regulated by transforming growth factor-β1 via increased expression of urokinase and the urokinase receptor Journal of Cellular Physiology. 164: 334-343. PMID 7622580 DOI: 10.1002/jcp.1041640214 |
0.097 |
|
| 1989 |
McCaffrey TA, Czaja JA. Diverse effects of estradiol-17 beta: concurrent suppression of appetite, blood pressure and vascular reactivity in conscious, unrestrained animals. Physiology & Behavior. 45: 649-57. PMID 2756058 DOI: 10.1016/0031-9384(89)90086-3 |
0.097 |
|
| 2003 |
Deeb RS, Resnick MJ, Mittar D, McCaffrey T, Hajjar DP, Upmacis RK. Tyrosine nitration in prostaglandin H(2) synthase. Journal of Lipid Research. 43: 1718-26. PMID 12364556 DOI: 10.1194/jlr.M200199-JLR200 |
0.097 |
|
| 2023 |
Mallory M, Munt JE, Narowski TM, Castillo I, Cuadra E, Pisanic N, Fields P, Powers JM, Dickson A, Harris R, Wargowsky R, Moran S, Allabban A, Raphel K, McCaffrey TA, et al. Longitudinal Analysis of Humoral and Cellular Immune Response Following SARS-CoV-2 Vaccination Supports Utilizing Point-Of-Care Tests to Enhance COVID-19 Booster Uptake. Medrxiv : the Preprint Server For Health Sciences. PMID 37066219 DOI: 10.1101/2023.04.03.23287498 |
0.094 |
|
| 1988 |
McCaffrey TA, Agarwal LA, Weksler BB. A rapid fluorometric DNA assay for the measurement of cell density and proliferation in vitro In Vitro Cellular and Developmental Biology - Animal. 24: 247-252. PMID 3280545 |
0.092 |
|
| 1994 |
Falcone DJ, Borth W, McCaffrey TA, Mathew J, McAdam K. Regulation of macrophage receptor-bound plasmin by autoproteolysis Journal of Biological Chemistry. 269: 32660-32666. PMID 7528219 |
0.085 |
|
| 1999 |
Shaknovich A, Forman ST, Parikh MA, Deutsch E, Bergman GW, McCaffrey TA, Newman GC, Tarazona N, Sanborn TA. Novel distal occluder washout method for prevention of no-reflow during stenting of saphenous vein grafts Catheterization and Cardiovascular Interventions. 47: 397-403. PMID 10470466 DOI: 10.1002/(SICI)1522-726X(199908)47:4<397::AID-CCD3>3.0.CO;2-M |
0.084 |
|
| 1993 |
McCaffrey TA, Falcone DJ. Evidence for an age-related dysfunction in the antiproliferative response to transforming growth factor-β in vascular smooth muscle cells Molecular Biology of the Cell. 4: 315-322. PMID 8387357 |
0.082 |
|
| 1996 |
Wright EJ, McCaffrey TA, Robertson AP, Vaughan ED, Felsen D. Chronic unilateral ureteral obstruction is associated with interstitial fibrosis and tubular expression of transforming growth factor-β Laboratory Investigation. 74: 528-537. PMID 8780170 |
0.077 |
|
| 1980 |
Mitchell DS, Wigodsky HS, Peel HH, McCaffrey TA. Operant conditioning permits voluntary, noninvasive measurement of blood pressure in conscious, unrestrained baboons (Papio cynocephalus) Behavior Research Methods &Amp; Instrumentation. 12: 492-498. DOI: 10.3758/BF03201822 |
0.076 |
|
| 1998 |
Sutaria PM, Ohebshalom M, McCaffrey TA, Vaughan ED, Felsen D. Transforming growth factor-β receptor types I and II are expressed in renal tubules and are increased after chronic unilateral ureteral obstruction Life Sciences. 62: 1965-1972. PMID 9619846 DOI: 10.1016/S0024-3205(98)00166-0 |
0.069 |
|
| 1994 |
Mccaffrey TA, Falcone DJ, Vicente D, Du B, Consigli S, Borth W. Protection of transforming growth factor-β1 activity by heparin and fucoidan Journal of Cellular Physiology. 159: 51-59. PMID 7511146 DOI: 10.1002/jcp.1041590108 |
0.068 |
|
| 1989 |
McCaffrey TA, Falcone DJ, Brayton CF, Agarwal LA, Welt FGP, Weksler BB. Transforming growth factor-β activity is potentiated by heparin via dissociation of the transforming growth factor-β/α2-macroglobulin inactive complex Journal of Cell Biology. 109: 441-448. PMID 2473082 DOI: 10.1083/jcb.109.1.441 |
0.067 |
|
| 1992 |
McCaffrey TA, Falcone DJ, Du B. Transforming growth factor-β1 is a heparin-binding protein: Identification of putative heparin-binding regions and isolation of heparins with varying affinity for TGF-β Journal of Cellular Physiology. 152: 430-440. PMID 1639873 |
0.063 |
|
| 2006 |
Rennie KL, Wells JC, McCaffrey TA, Livingstone MB. The effect of physical activity on body fatness in children and adolescents. The Proceedings of the Nutrition Society. 65: 393-402. PMID 17181906 DOI: 10.1079/PNS2006515 |
0.06 |
|
| 1994 |
McCaffrey TA, Falcone DJ, Borth W, Weksler BB. α2-Macroglobulin/transforming growth factor-β1 interactions. Modulation by heparin-like molecules and effects on vascular smooth muscle cells Annals of the New York Academy of Sciences. 737: 368-382. PMID 7524408 DOI: 10.1111/j.1749-6632.1994.tb44324.x |
0.056 |
|
| 1985 |
Czaja JA, Butera PC, McCaffrey TA. Duration of hormonal deprivation: influences on physiological and behavioral responsiveness to estradiol. Hormones and Behavior. 19: 52-63. PMID 3979970 DOI: 10.1016/0018-506X(85)90005-4 |
0.046 |
|
| 2014 |
Pourshahidi LK, Kerr MA, McCaffrey TA, Livingstone MB. Influencing and modifying children's energy intake: the role of portion size and energy density. The Proceedings of the Nutrition Society. 73: 397-406. PMID 24886909 DOI: 10.1017/S0029665114000615 |
0.034 |
|
| 2014 |
McGuffin LE, Price RK, McCaffrey TA, Hall G, Lobo A, Wallace JM, Livingstone MB. Parent and child perspectives on family out-of-home eating: a qualitative analysis. Public Health Nutrition. 1-12. PMID 25100625 DOI: 10.1017/S1368980014001384 |
0.032 |
|
| 2013 |
Murakami K, McCaffrey TA, Livingstone MB. Associations of dietary glycaemic index and glycaemic load with food and nutrient intake and general and central obesity in British adults. The British Journal of Nutrition. 110: 2047-57. PMID 23656860 DOI: 10.1017/S0007114513001414 |
0.032 |
|
| 2015 |
O'Brien SA, Livingstone MB, McNulty BA, Lyons J, Walton J, Flynn A, Segurado R, Dean M, Spence M, McCaffrey TA, Pourshahidi LK, Nugent AP, Gibney ER. Secular trends in reported portion size of food and beverages consumed by Irish adults. The British Journal of Nutrition. 113: 1148-57. PMID 25789856 DOI: 10.1017/S0007114515000276 |
0.032 |
|
| 1983 |
Czaja JA, McCaffrey TA, Butera PC. Effects of female hormonal condition on body weight of male partners: dependence on testicular factors. Behavioral Neuroscience. 97: 984-93. PMID 6686056 DOI: 10.1037//0735-7044.97.6.984 |
0.028 |
|
| 2016 |
Faulkner GP, Livingstone MB, Pourshahidi LK, Spence M, Dean M, O'Brien S, Gibney ER, Wallace JM, McCaffrey TA, Kerr MA. An evaluation of portion size estimation aids: precision, ease of use and likelihood of future use. Public Health Nutrition. 1-11. PMID 26857851 DOI: 10.1017/S1368980016000082 |
0.028 |
|
| 1983 |
Czaja JA, Butera PC, McCaffrey TA. Independent effects of estradiol on water and food intake. Behavioral Neuroscience. 97: 210-20. PMID 6849684 DOI: 10.1037//0735-7044.97.2.210 |
0.027 |
|
| 2006 |
Livingstone MB, McCaffrey TA, Rennie KL. Childhood obesity prevention studies: lessons learned and to be learned. Public Health Nutrition. 9: 1121-9. PMID 17378951 DOI: 10.1017/S1368980007668505 |
0.024 |
|
| 2013 |
McCann MT, Wallace JM, Robson PJ, Rennie KL, McCaffrey TA, Welch RW, Livingstone MB. Influence of nutrition labelling on food portion size consumption. Appetite. 65: 153-8. PMID 23428941 DOI: 10.1016/j.appet.2013.02.013 |
0.021 |
|
| 2006 |
Logan CM, McCaffrey TA, Wallace JM, Robson PJ, Welch RW, Dunne A, Livingstone MB. Investigation of the medium-term effects of Olibratrade mark fat emulsion on food intake in non-obese subjects. European Journal of Clinical Nutrition. 60: 1081-91. PMID 16538239 DOI: 10.1038/sj.ejcn.1602422 |
0.021 |
|
| 2009 |
Kerr MA, Rennie KL, McCaffrey TA, Wallace JM, Hannon-Fletcher MP, Livingstone MB. Snacking patterns among adolescents: a comparison of type, frequency and portion size between Britain in 1997 and Northern Ireland in 2005. The British Journal of Nutrition. 101: 122-31. PMID 18533071 DOI: 10.1017/S0007114508994769 |
0.019 |
|
| 2014 |
Faulkner GP, Livingstone MB, McCaffrey TA, Kerr MA. Supermarket own brand foods: lower in energy cost but similar in nutritional quality to their market brand alternatives. Journal of Human Nutrition and Dietetics : the Official Journal of the British Dietetic Association. 27: 617-25. PMID 24303957 DOI: 10.1111/jhn.12195 |
0.016 |
|
| 2014 |
Faulkner GP, Pourshahidi LK, Wallace JM, Kerr MA, McCaffrey TA, Livingstone MB. Perceived 'healthiness' of foods can influence consumers' estimations of energy density and appropriate portion size. International Journal of Obesity (2005). 38: 106-12. PMID 23732657 DOI: 10.1038/ijo.2013.69 |
0.015 |
|
| 2014 |
Murakami K, McCaffrey TA, Gallagher AM, Neville CE, Boreham CA, Livingstone MB. Dietary glycemic index and glycemic load in relation to changes in body composition measures during adolescence: Northern Ireland Young Hearts Study. International Journal of Obesity (2005). 38: 252-8. PMID 23732655 DOI: 10.1038/ijo.2013.63 |
0.015 |
|
| 2013 |
Murakami K, McCaffrey TA, Livingstone MB. Dietary glycaemic index and glycaemic load in relation to food and nutrient intake and indices of body fatness in British children and adolescents. The British Journal of Nutrition. 110: 1512-23. PMID 23534385 DOI: 10.1017/S000711451300072X |
0.012 |
|
| 2008 |
McCaffrey TA, Rennie KL, Kerr MA, Wallace JM, Hannon-Fletcher MP, Coward WA, Jebb SA, Livingstone MB. Energy density of the diet and change in body fatness from childhood to adolescence; is there a relation? The American Journal of Clinical Nutrition. 87: 1230-7. PMID 18469244 |
0.01 |
|
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