| Year |
Citation |
Score |
| 2020 |
Mughal MR, Koch H, Huang J, Chiaromonte F, DeGiorgio M. Learning the properties of adaptive regions with functional data analysis. Plos Genetics. 16: e1008896. PMID 32853200 DOI: 10.1371/Journal.Pgen.1008896 |
0.439 |
|
| 2020 |
Chen D, Cremona MA, Qi Z, Mitra RD, Chiaromonte F, Makova KD. Human L1 Transposition Dynamics Unraveled with Functional Data Analysis. Molecular Biology and Evolution. PMID 32722770 DOI: 10.1093/Molbev/Msaa194 |
0.403 |
|
| 2020 |
Arbeithuber B, Hester J, Cremona MA, Stoler N, Zaidi A, Higgins B, Anthony K, Chiaromonte F, Diaz FJ, Makova KD. Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues. Plos Biology. 18: e3000745. PMID 32667908 DOI: 10.1371/Journal.Pbio.3000745 |
0.345 |
|
| 2019 |
Cechova M, Harris RS, Tomaszkiewicz M, Arbeithuber B, Chiaromonte F, Makova KD. High satellite repeat turnover in great apes studied with short- and long-read technologies. Molecular Biology and Evolution. PMID 31273383 DOI: 10.1093/Molbev/Msz156 |
0.401 |
|
| 2018 |
Guiblet W, Cremona M, Cechova M, Harris R, Kejnovska I, Kejnovsky E, Eckert KA, Chiaromonte F, Makova KD. Long-read sequencing technology indicates genome-wide effects of non-B DNA on polymerization speed and error rate. Genome Research. PMID 30401733 DOI: 10.1101/Gr.241257.118 |
0.422 |
|
| 2018 |
Cremona MA, Pini A, Cumbo F, Makova KD, Chiaromonte F, Vantini S. IWTomics: testing high-resolution sequence-based "Omics" data at multiple locations and scales. Bioinformatics (Oxford, England). PMID 29474526 DOI: 10.1093/Bioinformatics/Bty090 |
0.412 |
|
| 2018 |
Marschall T, Marz M, Abeel T, Dijkstra L, Dutilh BE, Ghaffaari A, Kersey P, Kloosterman WP, Makinen V, Novak AM, Paten B, Porubsky D, Rivals E, Alkan C, Baaijens JA, ... ... Chiaromonte F, et al. Computational pan-genomics: status, promises and challenges. Briefings in Bioinformatics. 19: 118-135. PMID 27769991 DOI: 10.1093/Bib/Bbw089 |
0.442 |
|
| 2017 |
Bartolucci F, Chiaromonte F, Don PK, Lindsay BG. Composite Likelihood Inference in a Discrete Latent Variable Model for Two-Way “Clustering-by-Segmentation” Problems Journal of Computational and Graphical Statistics. 26: 388-402. DOI: 10.1080/10618600.2016.1172018 |
0.335 |
|
| 2016 |
Fungtammasan A, Walsh E, Chiaromonte F, Eckert KA, Makova KD. Corrigendum: A genome-wide analysis of common fragile sites: What features determine chromosomal instability in the human genome? Genome Research. 26: 1451. PMID 27698254 DOI: 10.1101/gr.214460.116 |
0.347 |
|
| 2016 |
Liu Y, Chiaromonte F, Li B. Structured Ordinary Least Squares: A Sufficient Dimension Reduction approach for regressions with partitioned predictors and heterogeneous units. Biometrics. PMID 27649087 DOI: 10.1111/Biom.12579 |
0.351 |
|
| 2016 |
Campos-Sánchez R, Cremona MA, Pini A, Chiaromonte F, Makova KD. Integration and Fixation Preferences of Human and Mouse Endogenous Retroviruses Uncovered with Functional Data Analysis. Plos Computational Biology. 12: e1004956. PMID 27309962 DOI: 10.1371/Journal.Pcbi.1004956 |
0.499 |
|
| 2015 |
Liu Y, Chiaromonte F, Ross H, Malhotra R, Elleder D, Poss M. Error correction and statistical analyses for intra-host comparisons of feline immunodeficiency virus diversity from high-throughput sequencing data. Bmc Bioinformatics. 16: 202. PMID 26123018 DOI: 10.1186/S12859-015-0607-Z |
0.325 |
|
| 2014 |
Rebolledo-Jaramillo B, Su MS, Stoler N, McElhoe JA, Dickins B, Blankenberg D, Korneliussen TS, Chiaromonte F, Nielsen R, Holland MM, Paul IM, Nekrutenko A, Makova KD. Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA. Proceedings of the National Academy of Sciences of the United States of America. 111: 15474-9. PMID 25313049 DOI: 10.1073/Pnas.1409328111 |
0.337 |
|
| 2014 |
Campos-Sánchez R, Kapusta A, Feschotte C, Chiaromonte F, Makova KD. Genomic landscape of human, bat, and ex vivo DNA transposon integrations. Molecular Biology and Evolution. 31: 1816-32. PMID 24809961 DOI: 10.1093/Molbev/Msu138 |
0.43 |
|
| 2013 |
Kuruppumullage Don P, Ananda G, Chiaromonte F, Makova KD. Segmenting the human genome based on states of neutral genetic divergence. Proceedings of the National Academy of Sciences of the United States of America. 110: 14699-704. PMID 23959903 DOI: 10.1073/Pnas.1221792110 |
0.496 |
|
| 2013 |
Ananda G, Walsh E, Jacob KD, Krasilnikova M, Eckert KA, Chiaromonte F, Makova KD. Distinct mutational behaviors differentiate short tandem repeats from microsatellites in the human genome. Genome Biology and Evolution. 5: 606-20. PMID 23241442 DOI: 10.1093/Gbe/Evs116 |
0.443 |
|
| 2012 |
Wagstaff BJ, Hedges DJ, Derbes RS, Campos Sanchez R, Chiaromonte F, Makova KD, Roy-Engel AM. Rescuing Alu: recovery of new inserts shows LINE-1 preserves Alu activity through A-tail expansion. Plos Genetics. 8: e1002842. PMID 22912586 DOI: 10.1371/Journal.Pgen.1002842 |
0.402 |
|
| 2012 |
Fungtammasan A, Walsh E, Chiaromonte F, Eckert KA, Makova KD. A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome? Genome Research. 22: 993-1005. PMID 22456607 DOI: 10.1101/Gr.134395.111 |
0.464 |
|
| 2011 |
Kelkar YD, Eckert KA, Chiaromonte F, Makova KD. A matter of life or death: how microsatellites emerge in and vanish from the human genome. Genome Research. 21: 2038-48. PMID 21994250 DOI: 10.1101/Gr.122937.111 |
0.42 |
|
| 2011 |
Ananda G, Chiaromonte F, Makova KD. A genome-wide view of mutation rate co-variation using multivariate analyses. Genome Biology. 12: R27. PMID 21426544 DOI: 10.1186/Gb-2011-12-3-R27 |
0.504 |
|
| 2010 |
Kelkar YD, Strubczewski N, Hile SE, Chiaromonte F, Eckert KA, Makova KD. What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats. Genome Biology and Evolution. 2: 620-35. PMID 20668018 DOI: 10.1093/Gbe/Evq046 |
0.394 |
|
| 2010 |
Schuster SC, Miller W, Ratan A, Tomsho LP, Giardine B, Kasson LR, Harris RS, Petersen DC, Zhao F, Qi J, Alkan C, Kidd JM, Sun Y, Drautz DI, Bouffard P, ... ... Chiaromonte F, et al. Complete Khoisan and Bantu genomes from southern Africa. Nature. 463: 943-7. PMID 20164927 DOI: 10.1038/Nature08795 |
0.472 |
|
| 2009 |
Cheng Y, Wu W, Kumar SA, Yu D, Deng W, Tripic T, King DC, Chen KB, Zhang Y, Drautz D, Giardine B, Schuster SC, Miller W, Chiaromonte F, Zhang Y, et al. Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression. Genome Research. 19: 2172-84. PMID 19887574 DOI: 10.1101/Gr.098921.109 |
0.362 |
|
| 2009 |
Kosakovsky Pond S, Wadhawan S, Chiaromonte F, Ananda G, Chung WY, Taylor J, Nekrutenko A. Windshield splatter analysis with the Galaxy metagenomic pipeline. Genome Research. 19: 2144-53. PMID 19819906 DOI: 10.1101/Gr.094508.109 |
0.308 |
|
| 2009 |
Zhang Y, Wu W, Cheng Y, King DC, Harris RS, Taylor J, Chiaromonte F, Hardison RC. Primary sequence and epigenetic determinants of in vivo occupancy of genomic DNA by GATA1. Nucleic Acids Research. 37: 7024-38. PMID 19767611 DOI: 10.1093/Nar/Gkp747 |
0.348 |
|
| 2009 |
Kvikstad EM, Chiaromonte F, Makova KD. Ride the wavelet: A multiscale analysis of genomic contexts flanking small insertions and deletions. Genome Research. 19: 1153-64. PMID 19502380 DOI: 10.1101/Gr.088922.108 |
0.466 |
|
| 2008 |
Cheng Y, King DC, Dore LC, Zhang X, Zhou Y, Zhang Y, Dorman C, Abebe D, Kumar SA, Chiaromonte F, Miller W, Green RD, Weiss MJ, Hardison RC. Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif. Genome Research. 18: 1896-905. PMID 18818370 DOI: 10.1101/Gr.083089.108 |
0.345 |
|
| 2008 |
Tyekucheva S, Makova KD, Karro JE, Hardison RC, Miller W, Chiaromonte F. Human-macaque comparisons illuminate variation in neutral substitution rates. Genome Biology. 9: R76. PMID 18447906 DOI: 10.1186/Gb-2008-9-4-R76 |
0.644 |
|
| 2008 |
Kelkar YD, Tyekucheva S, Chiaromonte F, Makova KD. The genome-wide determinants of human and chimpanzee microsatellite evolution. Genome Research. 18: 30-8. PMID 18032720 DOI: 10.1101/Gr.7113408 |
0.688 |
|
| 2008 |
Tyekucheva S, Chiaromonte F. Rejoinder on: Augmenting the bootstrap to analyze high dimensional genomic data Test. 17: 47-55. DOI: 10.1007/S11749-008-0107-9 |
0.653 |
|
| 2008 |
Tyekucheva S, Chiaromonte F. Augmenting the bootstrap to analyze high dimensional genomic data Test. 17: 1-18. DOI: 10.1007/S11749-008-0098-6 |
0.657 |
|
| 2007 |
Kvikstad EM, Tyekucheva S, Chiaromonte F, Makova KD. A macaque's-eye view of human insertions and deletions: differences in mechanisms. Plos Computational Biology. 3: 1772-82. PMID 17941704 DOI: 10.1371/Journal.Pcbi.0030176 |
0.691 |
|
| 2007 |
King DC, Taylor J, Zhang Y, Cheng Y, Lawson HA, Martin J, Chiaromonte F, Miller W, Hardison RC. Finding cis-regulatory elements using comparative genomics: some lessons from ENCODE data. Genome Research. 17: 775-86. PMID 17567996 DOI: 10.1101/Gr.5592107 |
0.474 |
|
| 2006 |
Taylor J, Tyekucheva S, King DC, Hardison RC, Miller W, Chiaromonte F. ESPERR: learning strong and weak signals in genomic sequence alignments to identify functional elements. Genome Research. 16: 1596-604. PMID 17053093 DOI: 10.1101/Gr.4537706 |
0.643 |
|
| 2006 |
Wang H, Zhang Y, Cheng Y, Zhou Y, King DC, Taylor J, Chiaromonte F, Kasturi J, Petrykowska H, Gibb B, Dorman C, Miller W, Dore LC, Welch J, Weiss MJ, et al. Experimental validation of predicted mammalian erythroid cis-regulatory modules. Genome Research. 16: 1480-92. PMID 17038566 DOI: 10.1101/Gr.5353806 |
0.407 |
|
| 2006 |
Carrel L, Park C, Tyekucheva S, Dunn J, Chiaromonte F, Makova KD. Genomic environment predicts expression patterns on the human inactive X chromosome. Plos Genetics. 2: e151. PMID 17009873 DOI: 10.1371/Journal.Pgen.0020151 |
0.643 |
|
| 2006 |
Taylor J, Tyekucheva S, Zody M, Chiaromonte F, Makova KD. Strong and weak male mutation bias at different sites in the primate genomes: insights from the human-chimpanzee comparison. Molecular Biology and Evolution. 23: 565-73. PMID 16280537 DOI: 10.1093/Molbev/Msj060 |
0.615 |
|
| 2005 |
King DC, Taylor J, Elnitski L, Chiaromonte F, Miller W, Hardison RC. Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences. Genome Research. 15: 1051-60. PMID 16024817 DOI: 10.1101/Gr.3642605 |
0.477 |
|
| 2004 |
Kolbe D, Taylor J, Elnitski L, Eswara P, Li J, Miller W, Hardison R, Chiaromonte F. Regulatory potential scores from genome-wide three-way alignments of human, mouse, and rat. Genome Research. 14: 700-7. PMID 15060013 DOI: 10.1101/Gr.1976004 |
0.411 |
|
| 2004 |
Makova KD, Yang S, Chiaromonte F. Insertions and deletions are male biased too: a whole-genome analysis in rodents. Genome Research. 14: 567-73. PMID 15059997 DOI: 10.1101/Gr.1971104 |
0.415 |
|
| 2004 |
Yang S, Smit AF, Schwartz S, Chiaromonte F, Roskin KM, Haussler D, Miller W, Hardison RC. Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes. Genome Research. 14: 517-27. PMID 15059992 DOI: 10.1101/Gr.1984404 |
0.439 |
|
| 2004 |
Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, ... ... Chiaromonte F, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521. PMID 15057822 DOI: 10.1038/Nature02426 |
0.465 |
|
| 2003 |
Chiaromonte F, Weber RJ, Roskin KM, Diekhans M, Kent WJ, Haussler D. The share of human genomic DNA under selection estimated from human-mouse genomic alignments. Cold Spring Harbor Symposia On Quantitative Biology. 68: 245-54. PMID 15338624 |
0.335 |
|
| 2003 |
Chiaromonte F, Miller W, Bouhassira EE. Gene length and proximity to neighbors affect genome-wide expression levels. Genome Research. 13: 2602-8. PMID 14613975 DOI: 10.1101/Gr.1169203 |
0.328 |
|
| 2003 |
Elnitski L, Hardison RC, Li J, Yang S, Kolbe D, Eswara P, O'Connor MJ, Schwartz S, Miller W, Chiaromonte F. Distinguishing regulatory DNA from neutral sites. Genome Research. 13: 64-72. PMID 12529307 DOI: 10.1101/Gr.817703 |
0.482 |
|
| 2003 |
Hardison RC, Roskin KM, Yang S, Diekhans M, Kent WJ, Weber R, Elnitski L, Li J, O'Connor M, Kolbe D, Schwartz S, Furey TS, Whelan S, Goldman N, Smit A, ... ... Chiaromonte F, et al. Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution. Genome Research. 13: 13-26. PMID 12529302 DOI: 10.1101/Gr.844103 |
0.483 |
|
| 2002 |
Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, ... ... Chiaromonte F, et al. Initial sequencing and comparative analysis of the mouse genome. Nature. 420: 520-62. PMID 12466850 DOI: 10.1038/Nature01262 |
0.482 |
|
| 2002 |
Chiaromonte F, Yap VB, Miller W. Scoring pairwise genomic sequence alignments. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 115-26. PMID 11928468 DOI: 10.1142/9789812799623_0012 |
0.367 |
|
| 2002 |
Chiaromonte F, Martinelli J. Dimension reduction strategies for analyzing global gene expression data with a response. Mathematical Biosciences. 176: 123-44. PMID 11867087 DOI: 10.1016/S0025-5564(01)00106-7 |
0.321 |
|
| 2001 |
Chiaromonte F, Yang S, Elnitski L, Yap VB, Miller W, Hardison RC. Association between divergence and interspersed repeats in mammalian noncoding genomic DNA Proceedings of the National Academy of Sciences of the United States of America. 98: 14503-14508. PMID 11717405 DOI: 10.1073/Pnas.251423898 |
0.445 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2019 |
Larivière D, Don PK, Wickham L, Chiaromonte F, Keiler K, Nekrutenko A. Transposon insertion sequencing analysis in Galaxy F1000research. 8. DOI: 10.7490/F1000Research.1117141.1 |
0.3 |
|
| 2007 |
Hardison RC, King DC, Taylor J, Wang H, Zhang Y, Zhou Y, Cheng Y, Dorman C, Dore LC, Weiss MJ, Chiaromonte F, Miller W. Comparative genomics to find function in noncoding DNA Blood Cells, Molecules, and Diseases. 38: 144-145. DOI: 10.1016/J.Bcmd.2006.10.060 |
0.294 |
|
| 2007 |
Cook RD, Li B, Chiaromonte F. Dimension reduction in regression without matrix inversion Biometrika. 94: 569-584. DOI: 10.1093/Biomet/Asm038 |
0.292 |
|
| 2005 |
Li B, Zha H, Chiaromonte F. Contour regression: A general approach to dimension reduction The Annals of Statistics. 33: 1580-1616. DOI: 10.1214/009053605000000192 |
0.289 |
|
| 2011 |
Wu W, Cheng Y, Keller CA, Ernst J, Kumar SA, Mishra T, Morrissey C, Dorman CM, Chen KB, Drautz D, Giardine B, Shibata Y, Song L, Pimkin M, Crawford GE, ... ... Chiaromonte F, et al. Dynamics of the epigenetic landscape during erythroid differentiation after GATA1 restoration. Genome Research. 21: 1659-71. PMID 21795386 DOI: 10.1101/Gr.125088.111 |
0.285 |
|
| 2007 |
Gutiérrez RA, Lejay LV, Dean A, Chiaromonte F, Shasha DE, Coruzzi GM. Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis. Genome Biology. 8: R7. PMID 17217541 DOI: 10.1186/Gb-2007-8-1-R7 |
0.278 |
|
| 2019 |
Cremona M, Xu H, Makova K, Reimherr M, Chiaromonte F, Madrigal P. Functional data analysis for computational biology. Bioinformatics (Oxford, England). PMID 30668667 DOI: 10.1093/Bioinformatics/Btz045 |
0.277 |
|
| 2019 |
Coronese M, Lamperti F, Keller K, Chiaromonte F, Roventini A. Evidence for sharp increase in the economic damages of extreme natural disasters. Proceedings of the National Academy of Sciences of the United States of America. PMID 31591192 DOI: 10.1073/Pnas.1907826116 |
0.275 |
|
| 2015 |
Goldstein J, Haran M, Simeonov I, Fricks J, Chiaromonte F. An attraction-repulsion point process model for respiratory syncytial virus infections. Biometrics. 71: 376-85. PMID 25660222 DOI: 10.1111/Biom.12267 |
0.265 |
|
| 2003 |
Li B, Cook RD, Chiaromonte F. Dimension reduction for the conditional mean in regressions with categorical predictors The Annals of Statistics. 31: 1636-1668. DOI: 10.1214/Aos/1065705121 |
0.263 |
|
| 2009 |
Veren D, Evans JL, Jones S, Chiaromonte F. Novel metrics for evaluation of ensemble forecasts of tropical cyclone structure Monthly Weather Review. 137: 2830-2850. DOI: 10.1175/2009Mwr2655.1 |
0.259 |
|
| 2013 |
Lee K, Li B, Chiaromonte F. A general theory for nonlinear sufficient dimension reduction: Formulation and estimation The Annals of Statistics. 41: 221-249. DOI: 10.1214/12-Aos1071 |
0.256 |
|
| 2002 |
Chiaromonte F, Cook RD. Annals of the Institute of Statistical Mathematics. 54: 768-795. DOI: 10.1023/A:1022411301790 |
0.255 |
|
| 2007 |
Cesari P, Chiaromonte F, Newell KM. Support vector machines categorize the scaling of human grip configurations. Behavior Research Methods. 39: 1001-7. PMID 18183918 DOI: 10.3758/Bf03192996 |
0.253 |
|
| 2009 |
Roy S, Lavine J, Chiaromonte F, Terwee J, VandeWoude S, Bjornstad O, Poss M. Multivariate statistical analyses demonstrate unique host immune responses to single and dual lentiviral infection. Plos One. 4: e7359. PMID 19806226 DOI: 10.1371/Journal.Pone.0007359 |
0.25 |
|
| 2021 |
M Guiblet W, Cremona MA, Harris RS, Chen D, Eckert KA, Chiaromonte F, Huang YF, Makova KD. Non-B DNA: a major contributor to small- and large-scale variation in nucleotide substitution frequencies across the genome. Nucleic Acids Research. PMID 33450015 DOI: 10.1093/nar/gkaa1269 |
0.249 |
|
| 2006 |
Evans JL, Arnott JM, Chiaromonte F. Evaluation of operational model cyclone structure forecasts during extratropical transition Monthly Weather Review. 134: 3054-3072. DOI: 10.1175/Mwr3236.1 |
0.248 |
|
| 2023 |
Weissensteiner MH, Cremona MA, Guiblet WM, Stoler N, Harris RS, Cechova M, Eckert KA, Chiaromonte F, Huang YF, Makova KD. Accurate sequencing of DNA motifs able to form alternative (non-B) structures. Genome Research. PMID 37433640 DOI: 10.1101/gr.277490.122 |
0.246 |
|
| 2010 |
Simeonov I, Gong X, Kim O, Poss M, Chiaromonte F, Fricks J. Exploratory Spatial Analysis of in vitro Respiratory Syncytial Virus Co-infections. Viruses. 2: 2782-802. PMID 21994640 DOI: 10.3390/V2122782 |
0.24 |
|
| 2003 |
Hardison RC, Chiaromonte F, Kolbe D, Wang H, Petrykowska H, Elnitski L, Yang S, Giardine B, Zhang Y, Riemer C, Schwartz S, Haussler D, Roskin KM, Weber RJ, Diekhans M, et al. Global predictions and tests of erythroid regulatory regions. Cold Spring Harbor Symposia On Quantitative Biology. 68: 335-44. PMID 15338635 DOI: 10.1101/Sqb.2003.68.335 |
0.235 |
|
| 2018 |
Craig SJC, Blankenberg D, Parodi ACL, Paul IM, Birch LL, Savage JS, Marini ME, Stokes JL, Nekrutenko A, Reimherr M, Chiaromonte F, Makova KD. Child Weight Gain Trajectories Linked To Oral Microbiota Composition. Scientific Reports. 8: 14030. PMID 30232389 DOI: 10.1038/S41598-018-31866-9 |
0.235 |
|
| 2021 |
Guiblet WM, DeGiorgio M, Cheng X, Chiaromonte F, Eckert KA, Huang YF, Makova KD. Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome. Genome Research. PMID 34187812 DOI: 10.1101/gr.269589.120 |
0.23 |
|
| 2016 |
Don PK, Evans JL, Chiaromonte F, Kowaleski AM. Mixture-Based Path Clustering for Synthesis of ECMWF Ensemble Forecasts of Tropical Cyclone Evolution Monthly Weather Review. 144: 3301-3320. DOI: 10.1175/Mwr-D-15-0214.1 |
0.229 |
|
| 2020 |
Di Iorio J, Chiaromonte F, Cremona MA. On the bias of H-scores for comparing biclusters, and how to correct it. Bioinformatics (Oxford, England). PMID 31985794 DOI: 10.1093/Bioinformatics/Btaa060 |
0.228 |
|
| 2020 |
Tripodi G, Chiaromonte F, Lillo F. Knowledge and social relatedness shape research portfolio diversification. Scientific Reports. 10: 14232. PMID 32859944 DOI: 10.1038/S41598-020-71009-7 |
0.228 |
|
| 1993 |
Chiaromonte F, Dosi G. Heterogeneity, competition, and macroeconomic dynamics Structural Change and Economic Dynamics. 4: 39-63. DOI: 10.1016/0954-349X(93)90004-4 |
0.221 |
|
| 2020 |
Coronese M, Lamperti F, Keller K, Chiaromonte F, Roventini A. Reply to Geiger and Stomper: On capital intensity and observed increases in the economic damages of extreme natural disasters. Proceedings of the National Academy of Sciences of the United States of America. PMID 32156737 DOI: 10.1073/Pnas.1922722117 |
0.221 |
|
| 2019 |
Yao W, Nandy D, Lindsay BG, Chiaromonte F. Covariate Information Matrix for Sufficient Dimension Reduction Journal of the American Statistical Association. 114: 1752-1764. DOI: 10.1080/01621459.2018.1515080 |
0.22 |
|
| 2007 |
Zhou Y, Cheng Y, Wang H, Zhang Y, King DC, Taylor J, Chiaromonte F, Dorman C, Miller W, Dore LC, Weiss MJ, Hardison RC. Validation of predicted erythroid cis-regulatory modules Blood Cells, Molecules, and Diseases. 38: 190. DOI: 10.1016/J.Bcmd.2006.10.158 |
0.216 |
|
| 2022 |
Onoja A, Picchiotti N, Fallerini C, Baldassarri M, Fava F, Colombo F, Chiaromonte F, Renieri A, Furini S, Raimondi F. An explainable model of host genetic interactions linked to COVID-19 severity. Communications Biology. 5: 1133. PMID 36289370 DOI: 10.1038/s42003-022-04073-6 |
0.214 |
|
| 2019 |
Craig S, Blankenberg D, Parodi A, Paul I, Birch L, Savage J, Marini M, Stokes J, Nekrutenko A, Reimherr M, Chiaromonte F, Makova K. 172. Child Weight Gain Trajectories Associated With Oral Microbiota Composition Biological Psychiatry. 85: S71. DOI: 10.1016/J.Biopsych.2019.03.186 |
0.2 |
|
| 2022 |
Insolia L, Molinari R, Rogers SR, Williams GR, Chiaromonte F, Calovi M. Honey bee colony loss linked to parasites, pesticides and extreme weather across the United States. Scientific Reports. 12: 20787. PMID 36456591 DOI: 10.1038/s41598-022-24946-4 |
0.177 |
|
| 2022 |
Arbeithuber B, Cremona MA, Hester J, Barrett A, Higgins B, Anthony K, Chiaromonte F, Diaz FJ, Makova KD. Advanced age increases frequencies of de novo mitochondrial mutations in macaque oocytes and somatic tissues. Proceedings of the National Academy of Sciences of the United States of America. 119: e2118740119. PMID 35394879 DOI: 10.1073/pnas.2118740119 |
0.17 |
|
| 2021 |
Insolia L, Kenney A, Chiaromonte F, Felici G. Simultaneous feature selection and outlier detection with optimality guarantees. Biometrics. PMID 34437713 DOI: 10.1111/biom.13553 |
0.162 |
|
| 2024 |
Lariviere D, Craig SJC, Paul IM, Hohman EE, Savage JS, Wright RO, Chiaromonte F, Makova KD, Reimherr ML. Methylation profiles at birth linked to early childhood obesity. Medrxiv : the Preprint Server For Health Sciences. PMID 38260407 DOI: 10.1101/2024.01.12.24301172 |
0.16 |
|
| 2021 |
Craig SJC, Kenney AM, Lin J, Paul IM, Birch LL, Savage JS, Marini ME, Chiaromonte F, Reimherr ML, Makova KD. Constructing a polygenic risk score for childhood obesity using functional data analysis. Econometrics and Statistics. 25: 66-86. PMID 36620476 DOI: 10.1016/j.ecosta.2021.10.014 |
0.151 |
|
| 2021 |
Boschi T, Di Iorio J, Testa L, Cremona MA, Chiaromonte F. Functional data analysis characterizes the shapes of the first COVID-19 epidemic wave in Italy. Scientific Reports. 11: 17054. PMID 34462450 DOI: 10.1038/s41598-021-95866-y |
0.149 |
|
| 2021 |
Nandy D, Chiaromonte F, Li R. Covariate Information Number for Feature Screening in Ultrahigh-Dimensional Supervised Problems. Journal of the American Statistical Association. 117: 1516-1529. PMID 36172297 DOI: 10.1080/01621459.2020.1864380 |
0.142 |
|
| 2021 |
Nanni M, Andrienko G, Barabási AL, Boldrini C, Bonchi F, Cattuto C, Chiaromonte F, Comandé G, Conti M, Coté M, Dignum F, Dignum V, Domingo-Ferrer J, Ferragina P, Giannotti F, et al. Give more data, awareness and control to individual citizens, and they will help COVID-19 containment. Ethics and Information Technology. 1-6. PMID 33551673 DOI: 10.1007/s10676-020-09572-w |
0.14 |
|
| 2021 |
Kenney A, Chiaromonte F, Felici G. MIP-BOOST: Efficient and Effective Feature Selection for Linear Regression. Journal of Computational and Graphical Statistics : a Joint Publication of American Statistical Association, Institute of Mathematical Statistics, Interface Foundation of North America. 30: 566-577. PMID 36406776 DOI: 10.1080/10618600.2020.1845184 |
0.119 |
|
| 2002 |
Chiaromonte F, Cook R, Li B. Sufficient dimensions reduction in regressions with categorical
predictors The Annals of Statistics. 30: 475-497. DOI: 10.1214/aos/1021379862 |
0.099 |
|
| 2021 |
Nandy D, Craig SJC, Cai J, Tian Y, Paul IM, Savage JS, Marini ME, Hohman EE, Reimherr ML, Patterson AD, Makova KD, Chiaromonte F. Metabolomic profiling of stool of two-year old children from the INSIGHT study reveals links between butyrate and child weight outcomes. Pediatric Obesity. e12833. PMID 34327846 DOI: 10.1111/ijpo.12833 |
0.045 |
|
| 2023 |
Insolia L, Molinari R, Rogers SR, Williams GR, Chiaromonte F, Calovi M. Author Correction: Honey bee colony loss linked to parasites, pesticides and extreme weather across the United States. Scientific Reports. 13: 1270. PMID 36690727 DOI: 10.1038/s41598-023-28374-w |
0.041 |
|
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