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Yutaka Kikuchi - Publications

Affiliations: 
Biological Science Hiroshima University (Japan) 
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48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Fukuzawa T, Kikuchi Y. Unusual light-reflecting pigment cells appear in the Xenopus neural tube culture system in the presence of guanosine. Tissue & Cell. 54: 55-58. PMID 30309510 DOI: 10.1016/J.Tice.2018.08.003  0.305
2018 Takayama K, Muto A, Kikuchi Y. Leucine/glutamine and v-ATPase/lysosomal acidification via mTORC1 activation are required for position-dependent regeneration. Scientific Reports. 8: 8278. PMID 29844341 DOI: 10.1038/S41598-018-26664-2  0.345
2018 Hozumi S, Shirai M, Wang J, Aoki S, Kikuchi Y. The N-terminal domain of gastrulation brain homeobox 2 (Gbx2) is required for iridophore specification in zebrafish. Biochemical and Biophysical Research Communications. PMID 29787751 DOI: 10.1016/J.Bbrc.2018.05.128  0.42
2017 Hozumi S, Aoki S, Kikuchi Y. Nuclear movement regulated by non-Smad Nodal signaling via JNK is associated with Smad signaling during zebrafish endoderm specification. Development (Cambridge, England). PMID 28947537 DOI: 10.1242/Dev.151746  0.307
2017 Miles LB, Mizoguchi T, Kikuchi Y, Verkade H. A role for planar cell polarity during early endoderm morphogenesis. Biology Open. PMID 28377456 DOI: 10.1242/Bio.021899  0.36
2017 Fujii M, Sakaguchi A, Kamata R, Nagao M, Kikuchi Y, Evans SM, Yoshizumi M, Shimono A, Saga Y, Kokubo H. Sfrp5 identifies murine cardiac progenitors for all myocardial structures except for the right ventricle. Nature Communications. 8: 14664. PMID 28287088 DOI: 10.1038/Ncomms14664  0.326
2017 Shiomi T, Muto A, Hozumi S, Kimura H, Kikuchi Y. Histone H3 Lysine 27 Trimethylation Leads to Loss of Mesendodermal Competence During Gastrulation in Zebrafish Ectodermal Cells. Zoological Science. 34: 64-71. PMID 28148216 DOI: 10.2108/Zs160032  0.41
2016 Hayashi Y, Nakamura T, Mitsudo K, Kimura K, Yamaguchi H, Ono T, Azami Y, Takayama K, Hirose K, Yabuuchi T, Suzuki M, Hatayama Y, Kikuchi Y, Wada H, Fuwa N, et al. Re-irradiation using proton beam therapy combined with weekly intra-arterial chemotherapy for recurrent oral cancer. Asia-Pacific Journal of Clinical Oncology. PMID 27220486 DOI: 10.1111/ajco.12502  0.364
2016 Ono T, Hareyama M, Nakamura T, Kimura K, Hayashi Y, Azami Y, Hirose K, Hatayama Y, Suzuki M, Wada H, Kikuchi Y, Nemoto K. The clinical results of proton beam therapy in patients with idiopathic pulmonary fibrosis: a single center experience. Radiation Oncology (London, England). 11: 56. PMID 27090216 DOI: 10.1186/s13014-016-0637-3  0.368
2016 Nakahara Y, Muto A, Hirabayashi R, Sakuma T, Yamamoto T, Kume S, Kikuchi Y. Temporal effects of Notch signaling and potential cooperation with multiple downstream effectors on adenohypophysis cell specification in zebrafish. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 27027936 DOI: 10.1111/Gtc.12358  0.394
2015 Hatayama Y, Nakamura T, Suzuki M, Azami Y, Ono T, Yabuuchi T, Hayashi Y, Kimura K, Hirose K, Wada H, Hareyama M, Kikuchi Y, Takai Y. Clinical Outcomes and Prognostic Factors of High-Dose Proton Beam Therapy for Peripheral Stage I Non-Small-Cell Lung Cancer. Clinical Lung Cancer. PMID 26725851 DOI: 10.1016/j.cllc.2015.11.013  0.4
2014 Shimoda N, Hirose K, Kaneto R, Izawa T, Yokoi H, Hashimoto N, Kikuchi Y. No evidence for AID/MBD4-coupled DNA demethylation in zebrafish embryos. Plos One. 9: e114816. PMID 25536520 DOI: 10.1371/Journal.Pone.0114816  0.506
2014 Hirose K, Shiomi T, Hozumi S, Kikuchi Y. Mechanistic target of rapamycin complex 1 signaling regulates cell proliferation, cell survival, and differentiation in regenerating zebrafish fins. Bmc Developmental Biology. 14: 42. PMID 25480380 DOI: 10.1186/S12861-014-0042-9  0.529
2014 Muto A, Ikeda S, Lopez-Burks ME, Kikuchi Y, Calof AL, Lander AD, Schilling TF. Nipbl and mediator cooperatively regulate gene expression to control limb development. Plos Genetics. 10: e1004671. PMID 25255084 DOI: 10.1371/Journal.Pgen.1004671  0.404
2014 Takayama K, Shimoda N, Takanaga S, Hozumi S, Kikuchi Y. Expression patterns of dnmt3aa, dnmt3ab, and dnmt4 during development and fin regeneration in zebrafish. Gene Expression Patterns : Gep. 14: 105-10. PMID 24509247 DOI: 10.1016/J.Gep.2014.01.005  0.406
2013 Hirose K, Shimoda N, Kikuchi Y. Transient reduction of 5-methylcytosine and 5-hydroxymethylcytosine is associated with active DNA demethylation during regeneration of zebrafish fin. Epigenetics : Official Journal of the Dna Methylation Society. 8: 899-906. PMID 23880758 DOI: 10.4161/Epi.25653  0.531
2013 Hirabayashi R, Hozumi S, Higashijima S, Kikuchi Y. Ddx46 is required for multi-lineage differentiation of hematopoietic stem cells in zebrafish. Stem Cells and Development. 22: 2532-42. PMID 23635340 DOI: 10.1089/Scd.2012.0623  0.405
2012 Hozumi S, Hirabayashi R, Yoshizawa A, Ogata M, Ishitani T, Tsutsumi M, Kuroiwa A, Itoh M, Kikuchi Y. DEAD-box protein Ddx46 is required for the development of the digestive organs and brain in zebrafish. Plos One. 7: e33675. PMID 22442707 DOI: 10.1371/Journal.Pone.0033675  0.362
2011 Yoshizawa A, Nakahara Y, Izawa T, Ishitani T, Tsutsumi M, Kuroiwa A, Itoh M, Kikuchi Y. Zebrafish Dmrta2 regulates neurogenesis in the telencephalon. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 16: 1097-109. PMID 22023386 DOI: 10.1111/J.1365-2443.2011.01555.X  0.443
2011 Hirose K, Shimoda N, Kikuchi Y. Expression patterns of lgr4 and lgr6 during zebrafish development. Gene Expression Patterns : Gep. 11: 378-83. PMID 21570488 DOI: 10.1016/J.Gep.2011.04.002  0.584
2010 Kikuchi Y, Yoshizawa A, Nakahara Y, Izawa T, Ishitani T, Tsutsumi M, Kuroiwa A, Itoh M. Zebrafish kuririn is a crucial factor for the telencephalic neurogenesis through the regulation of Hes-related gene Developmental Biology. 344: 497-498. DOI: 10.1016/J.Ydbio.2010.05.300  0.317
2009 Kinkel MD, Sefton EM, Kikuchi Y, Mizoguchi T, Ward AB, Prince VE. Cyp26 enzymes function in endoderm to regulate pancreatic field size. Proceedings of the National Academy of Sciences of the United States of America. 106: 7864-9. PMID 19416885 DOI: 10.1073/Pnas.0813108106  0.329
2008 Iizuka M, Tomita M, Shimizu K, Kikuchi Y, Yoshizato K. Translational enhancement of recombinant protein synthesis in transgenic silkworms by a 5'-untranslated region of polyhedrin gene of Bombyx mori Nucleopolyhedrovirus. Journal of Bioscience and Bioengineering. 105: 595-603. PMID 18640598 DOI: 10.1263/Jbb.105.595  0.331
2008 Mizoguchi T, Verkade H, Heath JK, Kuroiwa A, Kikuchi Y. Sdf1/Cxcr4 signaling controls the dorsal migration of endodermal cells during zebrafish gastrulation. Development (Cambridge, England). 135: 2521-9. PMID 18579679 DOI: 10.1242/Dev.020107  0.361
2008 Nomiyama H, Hieshima K, Osada N, Kato-Unoki Y, Otsuka-Ono K, Takegawa S, Izawa T, Yoshizawa A, Kikuchi Y, Tanase S, Miura R, Kusuda J, Nakao M, Yoshie O. Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX. Bmc Genomics. 9: 222. PMID 18482437 DOI: 10.1186/1471-2164-9-222  0.377
2008 Motoi N, Suzuki K, Hirota R, Johnson P, Oofusa K, Kikuchi Y, Yoshizato K. Identification and characterization of nucleoplasmin 3 as a histone-binding protein in embryonic stem cells. Development, Growth & Differentiation. 50: 307-20. PMID 18462200 DOI: 10.1111/J.1440-169X.2008.01034.X  0.334
2008 Wilkins SJ, Yoong S, Verkade H, Mizoguchi T, Plowman SJ, Hancock JF, Kikuchi Y, Heath JK, Perkins AC. Mtx2 directs zebrafish morphogenetic movements during epiboly by regulating microfilament formation. Developmental Biology. 314: 12-22. PMID 18154948 DOI: 10.1016/J.Ydbio.2007.10.050  0.388
2007 Nikaido M, Doi K, Shimizu T, Hibi M, Kikuchi Y, Yamasu K. Initial specification of the epibranchial placode in zebrafish embryos depends on the fibroblast growth factor signal. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 236: 564-71. PMID 17195184 DOI: 10.1002/Dvdy.21050  0.394
2006 Mizoguchi T, Izawa T, Kuroiwa A, Kikuchi Y. Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish. Developmental Biology. 300: 612-22. PMID 17026981 DOI: 10.1016/J.Ydbio.2006.08.073  0.37
2006 Sakaguchi T, Kikuchi Y, Kuroiwa A, Takeda H, Stainier DY. The yolk syncytial layer regulates myocardial migration by influencing extracellular matrix assembly in zebrafish. Development (Cambridge, England). 133: 4063-72. PMID 17008449 DOI: 10.1242/Dev.02581  0.556
2005 Bjornson CR, Griffin KJ, Farr GH, Terashima A, Himeda C, Kikuchi Y, Kimelman D. Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish. Developmental Cell. 9: 523-33. PMID 16198294 DOI: 10.1016/J.Devcel.2005.08.010  0.322
2005 Fukuda K, Kikuchi Y. Endoderm development in vertebrates: fate mapping, induction and regional specification. Development, Growth & Differentiation. 47: 343-55. PMID 16109032 DOI: 10.1111/J.1440-169X.2005.00815.X  0.35
2004 Kikuchi Y, Verkade H, Reiter JF, Kim CH, Chitnis AB, Kuroiwa A, Stainier DY. Notch signaling can regulate endoderm formation in zebrafish. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 229: 756-62. PMID 15042699 DOI: 10.1002/Dvdy.10483  0.69
2004 Reim G, Mizoguchi T, Stainier DY, Kikuchi Y, Brand M. The POU domain protein spg (pou2/Oct4) is essential for endoderm formation in cooperation with the HMG domain protein casanova. Developmental Cell. 6: 91-101. PMID 14723850 DOI: 10.1016/S1534-5807(03)00396-4  0.552
2001 Mizuno T, Kawasaki M, Nakahira M, Kagamiyama H, Kikuchi Y, Okamoto H, Mori K, Yoshihara Y. Molecular diversity in zebrafish NCAM family: Three members with different VASE usage and distinct localization Molecular and Cellular Neuroscience. 18: 119-130. PMID 11461158 DOI: 10.1006/Mcne.2001.1007  0.621
2001 Kikuchi Y, Agathon A, Alexander J, Thisse C, Waldron S, Yelon D, Thisse B, Stainier DYR. casanova encodes a novel Sox-related protein necessary and sufficient for early endoderm formation in zebrafish Genes and Development. 15: 1493-1505. PMID 11410530 DOI: 10.1101/Gad.892301  0.685
2001 Segawa H, Miyashita T, Hirate Y, Higashijima S, Chino N, Uyemura K, Kikuchi Y, Okamoto H. Functional repression of Islet-2 by disruption of complex with Ldb impairs peripheral axonal outgrowth in embryonic zebrafish. Neuron. 30: 423-36. PMID 11395004 DOI: 10.1016/S0896-6273(01)00283-5  0.605
2001 Reiter JF, Kikuchi Y, Stainier DYR. Multiple roles for Gata5 in zebrafish endoderm formation Development. 128: 125-135. PMID 11092818  0.705
2000 Kikuchi Y, Trinh LA, Reiter JF, Alexander J, Yelon D, Stainier DY. The zebrafish bonnie and clyde gene encodes a Mix family homeodomain protein that regulates the generation of endodermal precursors. Genes & Development. 14: 1279-89. PMID 10817762 DOI: 10.1101/Gad.14.10.1279  0.73
2000 Saito T, Hascilowicz T, Ohkido I, Kikuchi Y, Okamoto H, Hayashi S, Murakami Y, Matsufuji S. Two zebrafish (Danio rerio) antizymes with different expression and activities. The Biochemical Journal. 345: 99-106. PMID 10600644 DOI: 10.1042/Bj3450099  0.326
1999 Mieda M, Kikuchi Y, Hirate Y, Aoki M, Okamoto H. Compartmentalized expression of zebrafish ten-m3 and ten-m4, homologues of the Drosophila ten(m)/odd Oz gene, in the central nervous system. Mechanisms of Development. 87: 223-7. PMID 10495292 DOI: 10.1016/S0925-4773(99)00155-0  0.541
1998 Segawa H, Kikuchi Y, Chino N, Uyemura K, Okamoto H. Role of islet-2 in the axonal pathfinding of the sensory and motor neurons in emboryonic zebrafish Neuroscience Research. 31: S294. DOI: 10.1016/S0168-0102(98)82240-2  0.516
1997 Kikuchi Y, Segawa H, Tokumoto M, Tsubokawa T, Hotta Y, Uyemura K, Okamoto H. Ocular and cerebellar defects in zebrafish induced by overexpression of the LIM domains of the islet-3 LIM/homeodomain protein. Neuron. 18: 369-82. PMID 9115732 DOI: 10.1016/S0896-6273(00)81239-8  0.67
1997 Segawa H, Kikuchi Y, Chino N, Uyemura K, Okamoto H. 1037 Peripheral-branch specific control of axonogenesis in zebrafish sensory neurons by LIM/homeodomain proteins, Islet-2 and Islet-3 Neuroscience Research. 28: S128. DOI: 10.1016/S0168-0102(97)90342-4  0.541
1997 Kikuchi Y, Segawa H, Tokumoto M, Hotta Y, Uyemura K, Okamoto H. 1005 Functional analysis of zebrafish Islet-3 Neuroscience Research. 28: S117. DOI: 10.1016/S0168-0102(97)90310-2  0.625
1996 Shimoda N, Chevrette M, Ekker M, Kikuchi Y, Hotta Y, Okamoto H. Mermaid, a family of short interspersed repetitive elements, is useful for zebrafish genome mapping. Biochemical and Biophysical Research Communications. 220: 233-7. PMID 8602850 DOI: 10.1006/Bbrc.1996.0386  0.616
1996 Shimoda N, Chevrette M, Ekker M, Kikuchi Y, Hotta Y, Okamoto H. Mermaid: a family of short interspersed repetitive elements widespread in vertebrates. Biochemical and Biophysical Research Communications. 220: 226-32. PMID 8602849 DOI: 10.1006/Bbrc.1996.0385  0.618
1996 Kikuchi Y, Tokumoto M, Hotta Y, Uyemura K, Okamoto H. 1116 Functional analysis of zebrafish Islet-1 protein family Neuroscience Research. 25: S116. DOI: 10.1016/0168-0102(96)88879-1  0.643
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