Thomas W. Barnes, Ph.D. - Publications

Affiliations: 
2001 University of Rochester, Rochester, NY 
Area:
Biochemistry, Molecular Biology

3/48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2003 Znosko BM, Barnes TW, Krugh TR, Turner DH. NMR studies of DNA single strands and DNA:RNA hybrids with and without 1-propynylation at C5 of oligopyrimidines. Journal of the American Chemical Society. 125: 6090-7. PMID 12785839 DOI: 10.1021/Ja021285D  0.337
2001 Barnes TW, Turner DH. C5-(1-propynyl)-2'-deoxy-pyrimidines enhance mismatch penalties of DNA:RNA duplex formation. Biochemistry. 40: 12738-45. PMID 11601999 DOI: 10.1021/Bi011033+  0.396
2001 Barnes TW, Turner DH. Long-range cooperativity in molecular recognition of RNA by oligodeoxynucleotides with multiple C5-(1-propynyl) pyrimidines. Journal of the American Chemical Society. 123: 4107-18. PMID 11457173 DOI: 10.1021/Ja003208T  0.356
Low-probability matches (unlikely to be authored by this person)
2001 Barnes TW, Turner DH. Long-range cooperativity due to C5-propynylation of oligopyrimidines enhances specific recognition by uridine of ribo-adenosine over ribo-guanosine. Journal of the American Chemical Society. 123: 9186-7. PMID 11552837 DOI: 10.1021/Ja0157752  0.258
1997 Serra MJ, Barnes TW, Betschart K, Gutierrez MJ, Sprouse KJ, Riley CK, Stewart L, Temel RE. Improved parameters for the prediction of RNA hairpin stability. Biochemistry. 36: 4844-51. PMID 9125504 DOI: 10.1021/bi962608j  0.202
1949 MANN HH, BARNES TW. THE COMPETITION BETWEEN BARLEY AND CERTAIN WEEDS UNDER CONTROLLED CONDITIONS III. COMPETITION WITH AGROSTIS GIGANTEA Annals of Applied Biology. 36: 273-281. PMID 18151954 DOI: 10.1111/j.1744-7348.1949.tb06418.x  0.134
2001 Huang H, Alexandrov A, Chen X, Barnes TW, Zhang H, Dutta K, Pascal SM. Structure of an RNA hairpin from HRV-14 Biochemistry. 40: 8055-8064. PMID 11434774 DOI: 10.1021/Bi010572B  0.13
2008 Kroening PR, Barnes TW, Pease L, Limper A, Kita H, Vassallo R. Cigarette smoke-induced oxidative stress suppresses generation of dendritic cell IL-12 and IL-23 through ERK-dependent pathways. Journal of Immunology (Baltimore, Md. : 1950). 181: 1536-47. PMID 18606709 DOI: 10.4049/Jimmunol.181.2.1536  0.122
1950 MANN HH, BARNES TW. THE COMPETITION BETWEEN BARLEY AND CERTAIN WEEDS UNDER CONTROLLED CONDITIONS: IV. COMPETITION WITH STELLARIA MEDIA Annals of Applied Biology. 37: 139-148. DOI: 10.1111/j.1744-7348.1950.tb01034.x  0.094
1953 Barnes TW. The behaviour of nitrogenous materials buried in the soil: II. The solubilization of nitrogen under full aeration for long periods The Journal of Agricultural Science. 43: 365-368. DOI: 10.1017/S0021859600057567  0.089
2005 Barnes TW, Morgenthaler TI, Olson EJ, Hesley GK, Decker PA, Ryu JH. Sonographically guided thoracentesis and rate of pneumothorax Journal of Clinical Ultrasound. 33: 442-446. PMID 16281263 DOI: 10.1002/jcu.20163  0.088
2022 Kober C, Manni S, Wolff S, Barnes T, Mukherjee S, Vogel T, Hoenig L, Vogel P, Hahn A, Gerlach M, Vey M, Widmer E, Keiner B, Schuetz P, Roth N, et al. IgG3 and IgM Identified as Key to SARS-CoV-2 Neutralization in Convalescent Plasma Pools. Plos One. 17: e0262162. PMID 34982806 DOI: 10.1371/journal.pone.0262162  0.086
2023 Moncrieff J, Crellin N, Stansfeld J, Cooper R, Marston L, Freemantle N, Lewis G, Hunter R, Johnson S, Barnes T, Morant N, Pinfold V, Smith R, Kent L, Darton K, et al. Antipsychotic dose reduction and discontinuation versus maintenance treatment in people with schizophrenia and other recurrent psychotic disorders in England (the RADAR trial): an open, parallel-group, randomised controlled trial. The Lancet. Psychiatry. 10: 848-859. PMID 37778356 DOI: 10.1016/S2215-0366(23)00258-4  0.073
2011 Bernhard OK, Mathias RA, Barnes TW, Simpson RJ. A fluorescent microsphere-based method for assay of multiple analytes in plasma. Methods in Molecular Biology (Clifton, N.J.). 728: 195-206. PMID 21468949 DOI: 10.1007/978-1-61779-068-3_12  0.072
2014 Farrington NL, Lucky MA, Barnes T, Calvert R. Confirmed testicular torsion in a 67 year old. Journal of Surgical Case Reports. 2014. PMID 24876322 DOI: 10.1093/jscr/rjt119  0.071
1947 MANN HH, BARNES TW. THE COMPETITION BETWEEN BARLEY AND CERTAIN WEEDS UNDER CONTROLLED CONDITIONS: II. COMPETITION WITH HOLCUS MOLLIS Annals of Applied Biology. 34: 252-266. PMID 20266415 DOI: 10.1111/j.1744-7348.1947.tb06361.x  0.071
1950 Barnes TW. The formation of nitrates in soil following various crop rotations The Journal of Agricultural Science. 40: 166-168. DOI: 10.1017/S0021859600045639  0.066
2013 Ji H, Greening DW, Barnes TW, Lim JW, Tauro BJ, Rai A, Xu R, Adda C, Mathivanan S, Zhao W, Xue Y, Xu T, Zhu HJ, Simpson RJ. Proteome profiling of exosomes derived from human primary and metastatic colorectal cancer cells reveal differential expression of key metastatic factors and signal transduction components. Proteomics. 13: 1672-86. PMID 23585443 DOI: 10.1002/Pmic.201200562  0.065
1953 MANN HH, BARNES TW. THE MUTUAL EFFECT OF RYEGRASS AND CLOVER WHEN GROWN TOGETHER Annals of Applied Biology. 40: 566-572. DOI: 10.1111/j.1744-7348.1953.tb02394.x  0.065
1945 Barnes TW. Accumulation of sugars in barley seedlings on very acid soil [7] Nature. 156: 692.  0.065
2022 Aggarwal A, Akerman A, Milogiannakis V, Silva MR, Walker G, Stella AO, Kindinger A, Angelovich T, Waring E, Amatayakul-Chantler S, Roth N, Manni S, Hauser T, Barnes T, Condylios A, et al. SARS-CoV-2 Omicron BA.5: Evolving tropism and evasion of potent humoral responses and resistance to clinical immunotherapeutics relative to viral variants of concern. Ebiomedicine. 84: 104270. PMID 36130476 DOI: 10.1016/j.ebiom.2022.104270  0.065
1940 Mann HH, Barnes TW. Studies of soil after fifty years of wheat or barley cropping, especially of soil made acid with sulphate of ammonia The Journal of Agricultural Science. 30: 345-386. DOI: 10.1017/S0021859600048140  0.064
1952 MANN HH, BARNES TW. THE COMPETITION BETWEEN BARLEY AND CERTAIN WEEDS UNDER CONTROLLED CONDITIONS: V. COMPETITION WITH CLOVER CONSIDERED AS A WEED Annals of Applied Biology. 39: 111-119. DOI: 10.1111/j.1744-7348.1952.tb01003.x  0.063
2023 Akerman A, Milogiannakis V, Jean T, Esneau C, Silva MR, Ison T, Fichter C, Lopez JA, Chandra D, Naing Z, Caguicla J, Li D, Walker G, Amatayakul-Chantler S, Roth N, ... ... Barnes T, et al. Emergence and antibody evasion of BQ, BA.2.75 and SARS-CoV-2 recombinant sub-lineages in the face of maturing antibody breadth at the population level. Ebiomedicine. 90: 104545. PMID 37002990 DOI: 10.1016/j.ebiom.2023.104545  0.063
2010 Fromer L, Barnes T, Garvey C, Ortiz G, Saver DF, Yawn B. Innovations to achieve excellence in COPD diagnosis and treatment in primary care. Postgraduate Medicine. 122: 150-64. PMID 20861599 DOI: 10.3810/pgm.2010.09.2212  0.062
2021 Stinca S, Barnes TW, Vogel P, Meyers W, Schulte-Pelkum J, Filchtinski D, Steller L, Hauser T, Manni S, Gardiner DF, Popik S, Roth NJ, Schuetz P. Modelling the concentration of anti-SARS-CoV-2 immunoglobulin G in intravenous immunoglobulin product batches. Plos One. 16: e0259731. PMID 34843493 DOI: 10.1371/journal.pone.0259731  0.06
1951 Mann HH, Barnes TW. The behaviour of nitrogenous manures in the soil Part I. The loss of manurial nitrogen The Journal of Agricultural Science. 41: 309-314. DOI: 10.1017/S0021859600049480  0.057
2021 Barnes TW, Schulte-Pelkum J, Steller L, Filchtinski D, Jenness R, Williams MR, Kober C, Manni S, Hauser T, Hahn A, Kalina U, Simon TL, Schuetz P, Roth NJ. Determination of neutralising anti-SARS-CoV-2 antibody half-life in COVID-19 convalescent donors. Clinical Immunology (Orlando, Fla.). 108871. PMID 34619377 DOI: 10.1016/j.clim.2021.108871  0.057
2013 Bernhard OK, Greening DW, Barnes TW, Ji H, Simpson RJ. Detection of cadherin-17 in human colon cancer LIM1215 cell secretome and tumour xenograft-derived interstitial fluid and plasma. Biochimica Et Biophysica Acta. 1834: 2372-9. PMID 23557862 DOI: 10.1016/J.Bbapap.2013.03.022  0.053
2016 Osborn D, Burton A, Walters K, Nazareth I, Heinkel S, Atkins L, Blackburn R, Holt R, Hunter R, King M, Marston L, Michie S, Morris R, Morris S, Omar R, ... ... Barnes T, et al. Evaluating the clinical and cost effectiveness of a behaviour change intervention for lowering cardiovascular disease risk for people with severe mental illnesses in primary care (PRIMROSE study): study protocol for a cluster randomised controlled trial. Trials. 17: 80. PMID 26868949 DOI: 10.1186/s13063-016-1176-9  0.052
2017 Robb D, Barnes T. Accident rates and the impact of daylight saving time transitions. Accident; Analysis and Prevention. 111: 193-201. PMID 29223028 DOI: 10.1016/j.aap.2017.11.029  0.05
2022 Schmidt AE, Vogel P, Chastain CA, Barnes T, Roth NJ, Simon TL. Analysis of 52 240 source plasma donors of convalescent COVID-19 plasma: Sex, ethnicity, and age association with initial antibody levels and rate of dissipation. Journal of Clinical Apheresis. PMID 35815776 DOI: 10.1002/jca.21998  0.047
2012 Price O, Baker J, Paton C, Barnes T. Patient Group Directions: a safe and effective practice? British Journal of Nursing (Mark Allen Publishing). 21: 26-31. PMID 22240517 DOI: 10.12968/Bjon.2012.21.1.26  0.046
1989 Myers D, Barnes TW. Service, training key to information center's success Computers in Healthcare. 10: 34-37. PMID 10293949  0.043
2018 Osborn D, Burton A, Hunter R, Marston L, Atkins L, Barnes T, Blackburn R, Craig T, Gilbert H, Heinkel S, Holt R, King M, Michie S, Morris R, Morris S, et al. Clinical and cost-effectiveness of an intervention for reducing cholesterol and cardiovascular risk for people with severe mental illness in English primary care: a cluster randomised controlled trial. The Lancet. Psychiatry. PMID 29396118 DOI: 10.1016/S2215-0366(18)30007-5  0.043
1924 Kenyon J, Barnes TW. CLXXVII. - Investigations on the dependence of rotatory power on chemical constitution. Part XXIII. the normal aliphatic ethers of d-γ-nonanol Journal of the Chemical Society, Transactions. 125: 1395-1400. DOI: 10.1039/CT9242501395  0.042
2005 Barnes TW, Olson EJ, Morgenthaler TI, Edson RS, Decker PA, Ryu JH. Low yield of microbiologic studies on pleural fluid specimens Chest. 127: 916-921. PMID 15764776 DOI: 10.1378/chest.127.3.916  0.039
2020 Barnes T. Sketch of an Epidemic Varicella, Which Prevailed at Carlisle in the Summer and Autumn of 1826; Preceded by Observations on the Relative State of Small-Pox and Vaccination during the Seven Years Previous. Edinburgh Medical and Surgical Journal. 27: 61-71. PMID 30330051  0.033
2004 Barnes TW, Afessa B, Swanson KL, Lim KG. The clinical utility of flexible bronchoscopy in the evaluation of chronic cough. Chest. 126: 268-72. PMID 15249470 DOI: 10.1378/chest.126.1.268  0.029
1956 Mann HH, Barnes TW. The permanence of organic matter added to soil The Journal of Agricultural Science. 48: 160-163. DOI: 10.1017/S0021859600030422  0.028
1970 Barnes TW. A multipoint record from a single pen recorder Journal of Physics E: Scientific Instruments. 3: 761-763. DOI: 10.1088/0022-3735/3/10/303  0.027
2020 Barnes T. Cases of Five Individuals in One Family Having Small-Pox Twice. Edinburgh Medical and Surgical Journal. 19: 376-378. PMID 30331811  0.024
2006 Barnes TW, Vassallo R, Tazelaar HD, Hartman TE, Ryu JH. Diffuse bronchiolar disease due to chronic occult aspiration. Mayo Clinic Proceedings. 81: 172-6. PMID 16471070 DOI: 10.4065/81.2.172  0.022
2020 Barnes T. Two Successful Operations for Strangulated Hernia, Performed on the Sixth Day. Edinburgh Medical and Surgical Journal. 15: 527-533. PMID 30332148  0.018
2002 Joyce E, Hutton S, Mutsatsa S, Gibbins H, Webb E, Paul S, Robbins T, Barnes T. Executive dysfunction in first-episode schizophrenia and relationship to duration of untreated psychosis: the West London Study. The British Journal of Psychiatry. Supplement. 43: s38-44. PMID 12271799 DOI: 10.1192/Bjp.181.43.S38  0.018
2004 Barnes TW, Olsen KD, Morgenthaler TI. Obstructive lingual thyroid causing sleep apnea: A case report and review of the literature Sleep Medicine. 5: 605-607. PMID 15511710 DOI: 10.1016/j.sleep.2004.06.005  0.017
2018 Balint B, Killaspy H, Marston L, Barnes T, Latorre A, Joyce E, Clarke CS, De Micco R, Edwards MJ, Erro R, Foltynie T, Hunter RM, Nolan F, Schrag A, Freemantle N, et al. Development and clinimetric assessment of a nurse-administered screening tool for movement disorders in psychosis. Bjpsych Open. 4: 404-410. PMID 30294450 DOI: 10.1192/bjo.2018.55  0.01
1930 Barnes TW, Murray CW. Über das Musterziehen von Äpfeln in Obstgärten zur Bestimmung des Arsenik-Spritz-Rüekstandes Fresenius' Zeitschrift FüR Analytische Chemie. 81: 268-269. DOI: 10.1007/BF01370360  0.01
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