Casey Gifford, Ph.D. - Publications

Affiliations: 
2013 Biology: Medical Sciences, Division of Harvard University, Cambridge, MA, United States 
Area:
General Biology, Molecular Biology, Cell Biology

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Donaghey J, Thakurela S, Charlton J, Chen JS, Smith ZD, Gu H, Pop R, Clement K, Stamenova EK, Karnik R, Kelley DR, Gifford CA, Cacchiarelli D, Rinn JL, Gnirke A, et al. Genetic determinants and epigenetic effects of pioneer-factor occupancy. Nature Genetics. PMID 29358654 DOI: 10.1038/s41588-017-0034-3  0.4
2016 Aguilar CA, Pop R, Shcherbina A, Watts A, Matheny RW, Cacchiarelli D, Han WM, Shin E, Nakhai SA, Jang YC, Carrigan CT, Gifford CA, Kottke MA, Cesana M, Lee J, et al. Transcriptional and Chromatin Dynamics of Muscle Regeneration after Severe Trauma. Stem Cell Reports. PMID 27773702 DOI: 10.1016/j.stemcr.2016.09.009  0.4
2016 Gifford CA, Srivastava D. Heart disease modelling adds a Notch to its belt. Nature Cell Biology. 18: 3-5. PMID 26693916 DOI: 10.1038/ncb3294  0.4
2015 Tsankov AM, Akopian V, Pop R, Chetty S, Gifford CA, Daheron L, Tsankova NM, Meissner A. A qPCR ScoreCard quantifies the differentiation potential of human pluripotent stem cells. Nature Biotechnology. 33: 1182-92. PMID 26501952 DOI: 10.1038/nbt.3387  0.4
2015 Aguilar CA, Shcherbina A, Ricke DO, Pop R, Carrigan CT, Gifford CA, Urso ML, Kottke MA, Meissner A. In vivo Monitoring of Transcriptional Dynamics After Lower-Limb Muscle Injury Enables Quantitative Classification of Healing. Scientific Reports. 5: 13885. PMID 26381351 DOI: 10.1038/srep13885  0.4
2015 Cacchiarelli D, Trapnell C, Ziller MJ, Soumillon M, Cesana M, Karnik R, Donaghey J, Smith ZD, Ratanasirintrawoot S, Zhang X, Ho Sui SJ, Wu Z, Akopian V, Gifford CA, Doench J, et al. Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency. Cell. 162: 412-424. PMID 26186193 DOI: 10.1016/j.cell.2015.06.016  0.4
2015 Liao J, Karnik R, Gu H, Ziller MJ, Clement K, Tsankov AM, Akopian V, Gifford CA, Donaghey J, Galonska C, Pop R, Reyon D, Tsai SQ, Mallard W, Joung JK, et al. Targeted disruption of DNMT1, DNMT3A and DNMT3B in human embryonic stem cells. Nature Genetics. 47: 469-78. PMID 25822089 DOI: 10.1038/ng.3258  0.4
2015 Ziller MJ, Edri R, Yaffe Y, Donaghey J, Pop R, Mallard W, Issner R, Gifford CA, Goren A, Xing J, Gu H, Cacchiarelli D, Tsankov AM, Epstein C, Rinn JL, et al. Dissecting neural differentiation regulatory networks through epigenetic footprinting. Nature. 518: 355-9. PMID 25533951 DOI: 10.1038/nature13990  0.4
2013 Gifford CA, Ziller MJ, Gu H, Trapnell C, Donaghey J, Tsankov A, Shalek AK, Kelley DR, Shishkin AA, Issner R, Zhang X, Coyne M, Fostel JL, Holmes L, Meldrim J, et al. Transcriptional and epigenetic dynamics during specification of human embryonic stem cells. Cell. 153: 1149-63. PMID 23664763 DOI: 10.1016/j.cell.2013.04.037  0.4
2012 Gifford CA, Meissner A. Epigenetic obstacles encountered by transcription factors: reprogramming against all odds. Current Opinion in Genetics & Development. 22: 409-15. PMID 22922161 DOI: 10.1016/j.gde.2012.08.002  0.4
2012 Akopian V, Chan MM, Clement K, Galonska C, Gifford CA, Lehtola E, Liao J, Samavarchi-Tehrani P, Sindhu C, Smith ZD, Tsankov AM, Webster J, Zhang Y, Ziller MJ, Meissner A. Epigenomics and chromatin dynamics. Genome Biology. 13: 313. PMID 22364154 DOI: 10.1186/gb-2012-13-2-313  0.4
2007 Mougous JD, Gifford CA, Ramsdell TL, Mekalanos JJ. Threonine phosphorylation post-translationally regulates protein secretion in Pseudomonas aeruginosa. Nature Cell Biology. 9: 797-803. PMID 17558395 DOI: 10.1038/ncb1605  0.4
2006 Mougous JD, Cuff ME, Raunser S, Shen A, Zhou M, Gifford CA, Goodman AL, Joachimiak G, Ordoñez CL, Lory S, Walz T, Joachimiak A, Mekalanos JJ. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Science (New York, N.Y.). 312: 1526-30. PMID 16763151 DOI: 10.1126/science.1128393  0.4
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