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Nicolas Altemose, D.Phil., Ph.D. - Publications

Affiliations: 
2011-2015 Statistics University of Oxford, Oxford, United Kingdom 
 2015-2023 Bioengineering University of California, Berkeley, Berkeley, CA, United States 
 2023- Genetics Stanford University, Palo Alto, CA 
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14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Altemose N, Maslan A, Smith OK, Sundararajan K, Brown RR, Mishra R, Detweiler AM, Neff N, Miga KH, Straight AF, Streets A. DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome wide. Nature Methods. PMID 35396487 DOI: 10.1038/s41592-022-01475-6  0.654
2022 Hoyt SJ, Storer JM, Hartley GA, Grady PGS, Gershman A, de Lima LG, Limouse C, Halabian R, Wojenski L, Rodriguez M, Altemose N, Rhie A, Core LJ, Gerton JL, Makalowski W, et al. From telomere to telomere: The transcriptional and epigenetic state of human repeat elements. Science (New York, N.Y.). 376: eabk3112. PMID 35357925 DOI: 10.1126/science.abk3112  0.507
2022 Nurk S, Koren S, Rhie A, Rautiainen M, Bzikadze AV, Mikheenko A, Vollger MR, Altemose N, Uralsky L, Gershman A, Aganezov S, Hoyt SJ, Diekhans M, Logsdon GA, Alonge M, et al. The complete sequence of a human genome. Science (New York, N.Y.). 376: 44-53. PMID 35357919 DOI: 10.1126/science.abj6987  0.641
2022 Gershman A, Sauria MEG, Guitart X, Vollger MR, Hook PW, Hoyt SJ, Jain M, Shumate A, Razaghi R, Koren S, Altemose N, Caldas GV, Logsdon GA, Rhie A, Eichler EE, et al. Epigenetic patterns in a complete human genome. Science (New York, N.Y.). 376: eabj5089. PMID 35357915 DOI: 10.1126/science.abj5089  0.579
2022 Altemose N, Logsdon GA, Bzikadze AV, Sidhwani P, Langley SA, Caldas GV, Hoyt SJ, Uralsky L, Ryabov FD, Shew CJ, Sauria MEG, Borchers M, Gershman A, Mikheenko A, Shepelev VA, et al. Complete genomic and epigenetic maps of human centromeres. Science (New York, N.Y.). 376: eabl4178. PMID 35357911 DOI: 10.1126/science.abl4178  0.649
2022 Gupta A, Shamsi F, Altemose N, Dorlhiac GF, Cypess AM, White AP, Yosef N, Patti ME, Tseng YH, Streets A. Characterization of transcript enrichment and detection bias in single-nucleus RNA-seq for mapping of distinct human adipocyte lineages. Genome Research. PMID 35042723 DOI: 10.1101/gr.275509.121  0.572
2020 Altemose N, Maslan A, Rios-Martinez C, Lai A, White JA, Streets A. μDamID: A Microfluidic Approach for Joint Imaging and Sequencing of Protein-DNA Interactions in Single Cells. Cell Systems. 11: 354-366.e9. PMID 33099405 DOI: 10.1016/j.cels.2020.08.015  0.616
2019 Li R, Bitoun E, Altemose N, Davies RW, Davies B, Myers SR. A high-resolution map of non-crossover events reveals impacts of genetic diversity on mammalian meiotic recombination. Nature Communications. 10: 3900. PMID 31467277 DOI: 10.1038/S41467-019-11675-Y  0.421
2017 Altemose N, Noor N, Bitoun E, Tumian A, Imbeault M, Chapman JR, Aricescu AR, Myers SR. A map of human PRDM9 binding provides evidence for novel behaviors of PRDM9 and other zinc-finger proteins in meiosis. Elife. 6. PMID 29072575 DOI: 10.7554/Elife.28383  0.31
2015 Williams AL, Genovese G, Dyer T, Altemose N, Truax K, Jun G, Patterson N, Myers SR, Curran JE, Duggirala R, Blangero J, Reich D, Przeworski M. Non-crossover gene conversions show strong GC bias and unexpected clustering in humans. Elife. 4. PMID 25806687 DOI: 10.7554/Elife.04637  0.319
2014 Hinch AG, Altemose N, Noor N, Donnelly P, Myers SR. Recombination in the human Pseudoautosomal region PAR1. Plos Genetics. 10: e1004503. PMID 25033397 DOI: 10.1371/Journal.Pgen.1004503  0.393
2014 Altemose N, Miga KH, Maggioni M, Willard HF. Genomic Characterization of Large Heterochromatic Gaps in the Human Genome Assembly Plos Computational Biology. 10. PMID 24831296 DOI: 10.1371/Journal.Pcbi.1003628  0.583
2014 Miga KH, Newton Y, Jain M, Altemose N, Willard HF, Kent EJ. Centromere reference models for human chromosomes X and y satellite arrays Genome Research. 24: 697-707. PMID 24501022 DOI: 10.1101/Gr.159624.113  0.585
2013 Genovese G, Handsaker RE, Li H, Altemose N, Lindgren AM, Chambert K, Pasaniuc B, Price AL, Reich D, Morton CC, Pollak MR, Wilson JG, McCarroll SA. Using population admixture to help complete maps of the human genome. Nature Genetics. 45: 406-14, 414e1-2. PMID 23435088 DOI: 10.1038/Ng.2565  0.552
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