John L. R. Rubenstein

University of California, San Francisco, San Francisco, CA 
brain development
"John Rubenstein"

Mean distance: 13.39 (cluster 11)


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Harden M. McConnell grad student 1977-1980 Stanford (Chemistry Tree)
James E. Rothman grad student 1980-1982 Stanford (Cell Biology Tree)
Jean–François Nicolas post-doc Institut Pasteur
François Jacob post-doc 1984-1986 Institut Pasteur


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Shahriar Sheikhbahaei research assistant 2010-2012 UCSF / UC Berkeley
Gabriel L. McKinsey grad student UCSF
Shanni Silberberg grad student 2008- UCSF
Anil D. Bagri grad student 2001 UCSF
Michael L. Hultner grad student 2001 UCSF
Jason E. Long grad student 2002 UCSF
Jeremy A. Cholfin grad student 2003-2007 UCSF
Annie Arguello grad student 2013 UCSF
Kartik Pattabiraman grad student 2009-2014 UCSF
Stewart A. Anderson post-doc UCSF
Sonia Garel post-doc ENS Paris
Robert F. Hevner post-doc UCSF
Kelly J. Huffman post-doc UCSF
Diana M. Kahn post-doc UCSF
Sussan Paydar post-doc UCSF
Lori Sussel post-doc UCSF (Cell Biology Tree)
Yasushi O. OHKUBO post-doc 1996-2000 UCSF
Oscar Marín post-doc 1998-2003 UCSF
Gregory B. Potter post-doc 2002-2008 UCSF
Magdalena A. Petryniak post-doc 2003-2008 UCSF
Daniel Vogt post-doc 2009-2017 UCSF


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Sam Pleasure collaborator UCSF
Matthew W. State collaborator
Rong Mao collaborator 2006- MIT
BETA: Related publications


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Hu JS, Malik R, Sohal VS, et al. (2023) Loss in VIP-Lineage Cortical Interneurons Results in More VIP+ Interneurons and Enhanced Excitability. Cells. 13
Tsai NY, Wang F, Toma K, et al. (2022) Trans-Seq maps a selective mammalian retinotectal synapse instructed by Nephronectin. Nature Neuroscience. 25: 659-674
Ypsilanti AR, Pattabiraman K, Catta-Preta R, et al. (2021) Transcriptional network orchestrating regional patterning of cortical progenitors. Proceedings of the National Academy of Sciences of the United States of America. 118
Markenscoff-Papadimitriou E, Binyameen F, Whalen S, et al. (2021) Autism risk gene POGZ promotes chromatin accessibility and expression of clustered synaptic genes. Cell Reports. 37: 110089
Feng J, Hsu WH, Patterson D, et al. (2021) COUP-TFI specifies the medial entorhinal cortex identity and induces differential cell adhesion to determine the integrity of its boundary with neocortex. Science Advances. 7
Rubin AN, Malik R, Cho KK, et al. (2020) Regulatory Elements Inserted into AAVs Confer Preferential Activity in Cortical Interneurons. Eneuro
Markenscoff-Papadimitriou E, Whalen S, Przytycki P, et al. (2020) A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell
Pai EL, Chen J, Fazel Darbandi S, et al. (2020) and control mouse pallial interneuron fate and maturation through neuropsychiatric disease gene regulation. Elife. 9
Zhang Y, Liu G, Guo T, et al. (2020) Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog. Cell Reports. 30: 4490-4504.e4
Angara K, Pai EL, Bilinovich SM, et al. (2020) deletion results in depletion of the transcription factor and a specific loss of parvalbumin cortical interneurons. Proceedings of the National Academy of Sciences of the United States of America
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