John L. R. Rubenstein - Publications

Affiliations: 
University of California, San Francisco, San Francisco, CA 
Area:
brain development
Website:
http://physio.ucsf.edu/rubenstein/members/bios/jrubenstein.asp

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Kim DW, Liu K, Wang ZQ, Zhang YS, Bathini A, Brown MP, Lin SH, Washington PW, Sun C, Lindtner S, Lee B, Wang H, Shimogori T, Rubenstein JLR, Blackshaw S. Gene regulatory networks controlling differentiation, survival, and diversification of hypothalamic Lhx6-expressing GABAergic neurons. Communications Biology. 4: 95. PMID 33479483 DOI: 10.1038/s42003-020-01616-7  0.56
2020 Rubin AN, Malik R, Cho KK, Lim KJ, Lindtner S, Robinson Schwartz SE, Vogt D, Sohal VS, Rubenstein JL. Regulatory Elements Inserted into AAVs Confer Preferential Activity in Cortical Interneurons. Eneuro. PMID 33199411 DOI: 10.1523/ENEURO.0211-20.2020  0.68
2020 Markenscoff-Papadimitriou E, Whalen S, Przytycki P, Thomas R, Binyameen F, Nowakowski TJ, Kriegstein AR, Sanders SJ, State MW, Pollard KS, Rubenstein JL. A Chromatin Accessibility Atlas of the Developing Human Telencephalon. Cell. PMID 32610082 DOI: 10.1016/J.Cell.2020.06.002  0.6
2020 Puelles L, Diaz C, Stühmer T, Ferran JL, Martínez-de la Torre M, Rubenstein JLR. Lacz-Reporter mapping of Dlx5/6 expression and genoarchitectural analysis of the postnatal mouse prethalamus. The Journal of Comparative Neurology. PMID 32420617 DOI: 10.1002/Cne.24952  0.56
2020 Fazel Darbandi S, Robinson Schwartz SE, Pai EL, Everitt A, Turner ML, Cheyette BNR, Willsey AJ, State MW, Sohal VS, Rubenstein JLR. Enhancing WNT Signaling Restores Cortical Neuronal Spine Maturation and Synaptogenesis in Tbr1 Mutants. Cell Reports. 31: 107495. PMID 32294447 DOI: 10.1016/J.Celrep.2020.03.059  0.68
2020 Angara K, Pai EL, Bilinovich SM, Stafford AM, Nguyen JT, Li KX, Paul A, Rubenstein JL, Vogt D. deletion results in depletion of the transcription factor and a specific loss of parvalbumin cortical interneurons. Proceedings of the National Academy of Sciences of the United States of America. PMID 32123116 DOI: 10.1073/Pnas.1915458117  0.6
2020 Luo L, Ambrozkiewicz MC, Benseler F, Chen C, Dumontier E, Falkner S, Furlanis E, Gomez AM, Hoshina N, Huang WH, Hutchison MA, Itoh-Maruoka Y, Lavery LA, Li W, Maruo T, ... ... Rubenstein JLR, et al. Optimizing Nervous System-Specific Gene Targeting with Cre Driver Lines: Prevalence of Germline Recombination and Influencing Factors. Neuron. PMID 32027825 DOI: 10.1016/J.Neuron.2020.01.008  0.6
2020 Southwell DG, Seifikar H, Malik R, Lavi K, Vogt D, Rubenstein JL, Sohal VS. Interneuron transplantation rescues social behavior deficits without restoring wild-type physiology in a mouse model of autism with excessive synaptic inhibition. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 31988060 DOI: 10.1523/Jneurosci.1063-19.2019  0.68
2019 Malik R, Pai EL, Rubin AN, Stafford AM, Angara K, Minasi P, Rubenstein JL, Sohal VS, Vogt D. Tsc1 represses parvalbumin expression and fast-spiking properties in somatostatin lineage cortical interneurons. Nature Communications. 10: 4994. PMID 31676823 DOI: 10.1038/S41467-019-12962-4  0.68
2019 Sohal VS, Rubenstein JLR. Excitation-inhibition balance as a framework for investigating mechanisms in neuropsychiatric disorders. Molecular Psychiatry. PMID 31089192 DOI: 10.1038/S41380-019-0426-0  0.68
2019 Forés-Martos J, Catalá-López F, Sánchez-Valle J, Ibáñez K, Tejero H, Palma-Gudiel H, Climent J, Pancaldi V, Fañanás L, Arango C, Parellada M, Baudot A, Vogt D, Rubenstein JL, Valencia A, et al. Transcriptomic metaanalyses of autistic brains reveals shared gene expression and biological pathway abnormalities with cancer. Molecular Autism. 10: 17. PMID 31007884 DOI: 10.1186/S13229-019-0262-8  0.6
2018 An JY, Lin K, Zhu L, Werling DM, Dong S, Brand H, Wang HZ, Zhao X, Schwartz GB, Collins RL, Currall BB, Dastmalchi C, Dea J, Duhn C, Gilson MC, ... ... Rubenstein JL, et al. Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder. Science (New York, N.Y.). 362. PMID 30545852 DOI: 10.1126/Science.Aat6576  0.6
2018 Elbert A, Vogt D, Watson LA, Levy M, Jiang Y, Brûlé E, Rowland ME, Rubenstein JLR, Bérubé NG. CTCF governs the identity and migration of MGE-derived cortical interneurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 30377227 DOI: 10.1523/JNEUROSCI.3496-17.2018  0.6
2018 Fazel Darbandi S, Robinson Schwartz SE, Qi Q, Catta-Preta R, Pai EL, Mandell JD, Everitt A, Rubin A, Krasnoff RA, Katzman S, Tastad D, Nord AS, Willsey AJ, Chen B, State MW, ... ... Rubenstein JLR, et al. Neonatal Tbr1 Dosage Controls Cortical Layer 6 Connectivity. Neuron. PMID 30318412 DOI: 10.1016/J.Neuron.2018.09.027  0.68
2018 Sandberg M, Taher L, Hu J, Black BL, Nord AS, Rubenstein JLR. Genomic analysis of transcriptional networks directing progression of cell states during MGE development. Neural Development. 13: 21. PMID 30217225 DOI: 10.1186/s13064-018-0119-4  0.56
2018 Xu Z, Liang Q, Song X, Zhang Z, Lindtner S, Li Z, Wen Y, Liu G, Guo T, Qi D, Wang M, Wang C, Li H, You Y, Wang X, ... ... Rubenstein JL, et al. and coordinately promote D2-type medium spiny neuron production by activating expression. Development (Cambridge, England). PMID 29967281 DOI: 10.1242/dev.165456  0.56
2018 Liu Z, Zhang Z, Lindtner S, Li Z, Xu Z, Wei S, Liang Q, Wen Y, Tao G, You Y, Chen B, Wang Y, Rubenstein JL, Yang Z. Sp9 Regulates Medial Ganglionic Eminence-Derived Cortical Interneuron Development. Cerebral Cortex (New York, N.Y. : 1991). PMID 29878134 DOI: 10.1093/cercor/bhy133  0.56
2018 Werling DM, Brand H, An JY, Stone MR, Zhu L, Glessner JT, Collins RL, Dong S, Layer RM, Markenscoff-Papadimitriou E, Farrell A, Schwartz GB, Wang HZ, Currall BB, Zhao X, ... ... Rubenstein JL, et al. An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder. Nature Genetics. PMID 29700473 DOI: 10.1038/S41588-018-0107-Y  0.6
2018 Liu J, Reggiani JDS, Laboulaye MA, Pandey S, Chen B, Rubenstein JLR, Krishnaswamy A, Sanes JR. Tbr1 instructs laminar patterning of retinal ganglion cell dendrites. Nature Neuroscience. PMID 29632360 DOI: 10.1038/S41593-018-0127-Z  0.6
2018 Dickel DE, Ypsilanti AR, Pla R, Zhu Y, Barozzi I, Mannion BJ, Khin YS, Fukuda-Yuzawa Y, Plajzer-Frick I, Pickle CS, Lee EA, Harrington AN, Pham QT, Garvin TH, Kato M, ... ... Rubenstein JLR, et al. Ultraconserved Enhancers Are Required for Normal Development. Cell. PMID 29358049 DOI: 10.1016/J.Cell.2017.12.017  0.56
2017 Hu JS, Vogt D, Sandberg M, Rubenstein JL. Cortical interneuron development: a tale of time and space. Development (Cambridge, England). 144: 3867-3878. PMID 29089360 DOI: 10.1242/dev.132852  0.6
2017 Pla R, Stanco A, Howard MA, Rubin AN, Vogt D, Mortimer N, Cobos I, Potter GB, Lindtner S, Price JD, Nord AS, Visel A, Schreiner CE, Baraban SC, Rowitch DH, ... Rubenstein JLR, et al. Dlx1 and Dlx2 Promote Interneuron GABA Synthesis, Synaptogenesis, and Dendritogenesis. Cerebral Cortex (New York, N.Y. : 1991). 1-19. PMID 29028947 DOI: 10.1093/Cercor/Bhx241  0.8
2017 Vogt D, Cho KKA, Shelton SM, Paul A, Huang ZJ, Sohal VS, Rubenstein JLR. Mouse Cntnap2 and Human CNTNAP2 ASD Alleles Cell Autonomously Regulate PV+ Cortical Interneurons. Cerebral Cortex (New York, N.Y. : 1991). 1-12. PMID 29028946 DOI: 10.1093/Cercor/Bhx248  0.68
2017 Le TN, Zhou QP, Cobos I, Zhang S, Zagozewski J, Japoni S, Vriend J, Parkinson T, Du G, Rubenstein JL, Eisenstat DD. GABAergic interneuron differentiation in the basal forebrain is mediated through direct regulation of glutamic acid decarboxylase isoforms by Dlx homeobox transcription factors. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 28821666 DOI: 10.1523/Jneurosci.2125-16.2017  0.8
2017 Hu JS, Vogt D, Lindtner S, Sandberg M, Silberberg SN, Rubenstein JLR. Coup-TF1&2 (Nr2f1 and Nr2f2) control subtype and laminar identity of MGE-derived neocortical interneurons. Development (Cambridge, England). PMID 28694260 DOI: 10.1242/dev.150664  0.6
2017 Raju CS, Spatazza J, Stanco A, Larimer P, Sorrells SF, Kelley KW, Nicholas CR, Paredes MF, Lui JH, Hasenstaub AR, Kriegstein AR, Alvarez-Buylla A, Rubenstein JL, Oldham MC. Secretagogin is Expressed by Developing Neocortical GABAergic Neurons in Humans but not Mice and Increases Neurite Arbor Size and Complexity. Cerebral Cortex (New York, N.Y. : 1991). 1-13. PMID 28449024 DOI: 10.1093/Cercor/Bhx101  0.4
2016 Sandberg M, Flandin P, Silberberg S, Su-Feher L, Price JD, Hu JS, Kim C, Visel A, Nord AS, Rubenstein JL. Transcriptional Networks Controlled by NKX2-1 in the Development of Forebrain GABAergic Neurons. Neuron. 91: 1260-1275. PMID 27657450 DOI: 10.1016/J.Neuron.2016.08.020  0.56
2016 Wu PR, Cho KK, Vogt D, Sohal VS, Rubenstein JL. The Cytokine CXCL12 Promotes Basket Interneuron Inhibitory Synapses in the Medial Prefrontal Cortex. Cerebral Cortex (New York, N.Y. : 1991). PMID 27497284 DOI: 10.1093/Cercor/Bhw230  0.68
2016 Sun Y, Paşca SP, Portmann T, Goold C, Worringer KA, Guan W, Chan KC, Gai H, Vogt D, Chen YJ, Mao R, Chan K, Rubenstein JL, Madison DV, Hallmayer J, et al. A deleterious Nav1.1 mutation selectively impairs telencephalic inhibitory neurons derived from Dravet Syndrome patients. Elife. 5. PMID 27458797 DOI: 10.7554/Elife.13073  0.6
2016 Notwell JH, Heavner WE, Fazel Darbandi S, Katzman S, McKenna WL, Ortiz-Londono CF, Tastad D, Eckler MJ, Rubenstein JL, McConnell SK, Chen B, Bejerano G. TBR1 regulates autism risk genes in the developing neocortex. Genome Research. PMID 27325115 DOI: 10.1101/Gr.203612.115  0.6
2015 Puelles L, Medina L, Borello U, Legaz I, Teissier A, Pierani A, Rubenstein JL. Radial derivatives of the mouse ventral pallium traced with Dbx1-LacZ reporters. Journal of Chemical Neuroanatomy. PMID 26748312 DOI: 10.1016/J.Jchemneu.2015.10.011  0.56
2015 Hoch RV, Lindtner S, Price JD, Rubenstein JL. OTX2 Transcription Factor Controls Regional Patterning within the Medial Ganglionic Eminence and Regional Identity of the Septum. Cell Reports. 12: 482-94. PMID 26166575 DOI: 10.1016/j.celrep.2015.06.043  0.56
2014 Eom TY, Stanco A, Guo J, Wilkins G, Deslauriers D, Yan J, Monckton C, Blair J, Oon E, Perez A, Salas E, Oh A, Ghukasyan V, Snider WD, Rubenstein JL, et al. Differential regulation of microtubule severing by APC underlies distinct patterns of projection neuron and interneuron migration. Developmental Cell. 31: 677-89. PMID 25535916 DOI: 10.1016/J.Devcel.2014.11.022  0.36
2014 Lee AT, Gee SM, Vogt D, Patel T, Rubenstein JL, Sohal VS. Pyramidal neurons in prefrontal cortex receive subtype-specific forms of excitation and inhibition. Neuron. 81: 61-8. PMID 24361076 DOI: 10.1016/J.Neuron.2013.10.031  0.36
2013 Arguello A, Yang X, Vogt D, Stanco A, Rubenstein JL, Cheyette BN. Dapper antagonist of catenin-1 cooperates with Dishevelled-1 during postsynaptic development in mouse forebrain GABAergic interneurons. Plos One. 8: e67679. PMID 23826333 DOI: 10.1371/Journal.Pone.0067679  0.8
2013 Chen YJ, Vogt D, Wang Y, Visel A, Silberberg SN, Nicholas CR, Danjo T, Pollack JL, Pennacchio LA, Anderson S, Sasai Y, Baraban SC, Kriegstein AR, Alvarez-Buylla A, Rubenstein JL. Use of "MGE enhancers" for labeling and selection of embryonic stem cell-derived medial ganglionic eminence (MGE) progenitors and neurons. Plos One. 8: e61956. PMID 23658702 DOI: 10.1371/Journal.Pone.0061956  0.8
2013 Nicholas CR, Chen J, Tang Y, Southwell DG, Chalmers N, Vogt D, Arnold CM, Chen YJ, Stanley EG, Elefanty AG, Sasai Y, Alvarez-Buylla A, Rubenstein JL, Kriegstein AR. Functional maturation of hPSC-derived forebrain interneurons requires an extended timeline and mimics human neural development. Cell Stem Cell. 12: 573-86. PMID 23642366 DOI: 10.1016/J.Stem.2013.04.005  0.8
2012 Bráz JM, Sharif-Naeini R, Vogt D, Kriegstein A, Alvarez-Buylla A, Rubenstein JL, Basbaum AI. Forebrain GABAergic neuron precursors integrate into adult spinal cord and reduce injury-induced neuropathic pain. Neuron. 74: 663-75. PMID 22632725 DOI: 10.1016/J.Neuron.2012.02.033  0.8
2011 Flandin P, Zhao Y, Vogt D, Jeong J, Long J, Potter G, Westphal H, Rubenstein JL. Lhx6 and Lhx8 coordinately induce neuronal expression of Shh that controls the generation of interneuron progenitors. Neuron. 70: 939-50. PMID 21658586 DOI: 10.1016/J.Neuron.2011.04.020  0.8
2010 Maira M, Long JE, Lee AY, Rubenstein JL, Stifani S. Erratum to: Role for TGF-β superfamily signaling in telencephalic GABAergic neuron development. Journal of Neurodevelopmental Disorders. 2: 47. PMID 22127839 DOI: 10.1007/S11689-009-9040-9  0.8
2008 García-López M, Abellán A, Legaz I, Rubenstein JL, Puelles L, Medina L. Histogenetic compartments of the mouse centromedial and extended amygdala based on gene expression patterns during development. The Journal of Comparative Neurology. 506: 46-74. PMID 17990271 DOI: 10.1002/cne.21524  0.56
2007 Cobos I, Borello U, Rubenstein JL. Dlx transcription factors promote migration through repression of axon and dendrite growth. Neuron. 54: 873-88. PMID 17582329 DOI: 10.1016/j.neuron.2007.05.024  0.8
2005 Cobos I, Broccoli V, Rubenstein JL. The vertebrate ortholog of Aristaless is regulated by Dlx genes in the developing forebrain. The Journal of Comparative Neurology. 483: 292-303. PMID 15682394 DOI: 10.1002/cne.20405  0.8
2004 Medina L, Legaz I, González G, De Castro F, Rubenstein JL, Puelles L. Expression of Dbx1, Neurogenin 2, Semaphorin 5A, Cadherin 8, and Emx1 distinguish ventral and lateral pallial histogenetic divisions in the developing mouse claustroamygdaloid complex. The Journal of Comparative Neurology. 474: 504-23. PMID 15174069 DOI: 10.1002/cne.20141  0.56
2003 Puelles L, Rubenstein JL. Forebrain gene expression domains and the evolving prosomeric model. Trends in Neurosciences. 26: 469-76. PMID 12948657 DOI: 10.1016/S0166-2236(03)00234-0  0.56
2002 Garda AL, Puelles L, Rubenstein JL, Medina L. Expression patterns of Wnt8b and Wnt7b in the chicken embryonic brain suggest a correlation with forebrain patterning centers and morphogenesis. Neuroscience. 113: 689-98. PMID 12150789 DOI: 10.1016/S0306-4522(02)00171-9  0.56
2001 Cobos I, Shimamura K, Rubenstein JL, Martínez S, Puelles L. Fate map of the avian anterior forebrain at the four-somite stage, based on the analysis of quail-chick chimeras. Developmental Biology. 239: 46-67. PMID 11784018 DOI: 10.1006/dbio.2001.0423  0.8
2001 Puelles E, Rubenstein JL, Puelles L. Chicken Nkx6.1 expression at advanced stages of development identifies distinct brain nuclei derived from the basal plate. Mechanisms of Development. 102: 279-82. PMID 11287211 DOI: 10.1016/S0925-4773(01)00313-6  0.56
1999 Timpe LC, Jin KL, Puelles L, Rubenstein JL. Cyclic nucleotide-gated cation channel expression in embryonic chick brain. Brain Research. Molecular Brain Research. 66: 175-8. PMID 10095089 DOI: 10.1016/S0169-328X(99)00018-2  0.56
1998 Rubenstein JL, Shimamura K, Martinez S, Puelles L. Regionalization of the prosencephalic neural plate. Annual Review of Neuroscience. 21: 445-77. PMID 9530503 DOI: 10.1146/annurev.neuro.21.1.445  0.56
1997 Shimamura K, Martinez S, Puelles L, Rubenstein JL. Patterns of gene expression in the neural plate and neural tube subdivide the embryonic forebrain into transverse and longitudinal domains. Developmental Neuroscience. 19: 88-96. PMID 9078438 DOI: 10.1159/000111190  0.56
1996 Hartigan DJ, Rubenstein JL. The cDNA sequence of murine Nkx-2.2. Gene. 168: 271-2. PMID 8654958 DOI: 10.1016/0378-1119(95)00745-8  0.4
1995 Shimamura K, Hartigan DJ, Martinez S, Puelles L, Rubenstein JL. Longitudinal organization of the anterior neural plate and neural tube. Development (Cambridge, England). 121: 3923-33. PMID 8575293  0.56
1994 Porteus MH, Bulfone A, Liu JK, Puelles L, Lo LC, Rubenstein JL. DLX-2, MASH-1, and MAP-2 expression and bromodeoxyuridine incorporation define molecularly distinct cell populations in the embryonic mouse forebrain. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 14: 6370-83. PMID 7965042 DOI: 10.1523/Jneurosci.14-11-06370.1994  0.56
1994 Rubenstein JL, Martinez S, Shimamura K, Puelles L. The embryonic vertebrate forebrain: the prosomeric model. Science (New York, N.Y.). 266: 578-80. PMID 7939711 DOI: 10.1126/Science.7939711  0.56
1994 Rubenstein JL, Puelles L. Homeobox gene expression during development of the vertebrate brain. Current Topics in Developmental Biology. 29: 1-63. PMID 7828435 DOI: 10.1016/S0070-2153(08)60546-3  0.56
1993 Bulfone A, Kim HJ, Puelles L, Porteus MH, Grippo JF, Rubenstein JL. The mouse Dlx-2 (Tes-1) gene is expressed in spatially restricted domains of the forebrain, face and limbs in midgestation mouse embryos. Mechanisms of Development. 40: 129-40. PMID 8098616 DOI: 10.1016/0925-4773(93)90071-5  0.56
1993 Puelles L, Rubenstein JL. Expression patterns of homeobox and other putative regulatory genes in the embryonic mouse forebrain suggest a neuromeric organization. Trends in Neurosciences. 16: 472-9. PMID 7507621 DOI: 10.1016/0166-2236(93)90080-6  0.56
1988 Nicolas JF, Rubenstein JL. Retroviral vectors. Biotechnology (Reading, Mass.). 10: 493-513. PMID 3061522  0.8
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