Gene W. Yeo, PhD, MBA
Affiliations: | Cellular and Molecular Medicine | University of California, San Diego, La Jolla, CA |
Area:
RNA processing, neurodevelopment, neurodegeneration, computational biologyWebsite:
http://yeolab.ucsd.edu/yeolab/Home.htmlGoogle:
"Gene Yeo"Bio:
http://yeolab.ucsd.edu/yeolab/Gene_Yeo.html
http://hdl.handle.net/1721.1/28853
Mean distance: 12.96 (cluster 17) | S | N | B | C | P |
Cross-listing: Computational Biology Tree
Parents
Sign in to add mentor| Christopher B. Burge | grad student | 2004 | MIT (Computational Biology Tree) | |
| (Identification, improved modeling and integration of signals to predict constitutive and altering splicing) | ||||
| Tomaso A. Poggio | grad student | 2004 | MIT | |
| Fred H. (Rusty) Gage | post-doc | 2005-2008 | Salk Institute | |
Children
Sign in to add trainee| En-Ching Luo | grad student | 2014- | UCSD |
| Noorsher Ahmed | grad student | 2017- | UC San Diego Health |
| Mary E. Winn | grad student | 2011 | UCSD |
| Anne Conway | grad student | 2014 | UCSD |
| Boyko Kakaradov | grad student | 2014 | UCSD |
| Olga B Botvinnik | grad student | 2013-2017 | UCSD |
| Norah Al-Azzam | grad student | 2021-2024 | UCSD |
BETA: Related publications
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Publications
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| Medina-Munoz HC, Kofman E, Jagannatha P, et al. (2024) Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. Nature Communications. 15: 875 |
| Schmok JC, Jain M, Street LA, et al. (2024) Large-scale evaluation of the ability of RNA-binding proteins to activate exon inclusion. Nature Biotechnology |
| Boyle EA, Goldberg G, Schmok JC, et al. (2023) Junior scientists spotlight social bonds in seminars for diversity, equity, and inclusion in STEM. Plos One. 18: e0293322 |
| Medina-Munoz HC, Kofman E, Jagannatha P, et al. (2023) Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. Biorxiv : the Preprint Server For Biology |
| Kofman E, Yee B, Medina-Munoz HC, et al. (2023) FLARE: a fast and flexible workflow for identifying RNA editing foci. Bmc Bioinformatics. 24: 370 |
| Okholm TLH, Kamstrup AB, Nielsen MM, et al. (2023) circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA. Biorxiv : the Preprint Server For Biology |
| Antal CE, Oh TG, Aigner S, et al. (2023) A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer. Nature Communications. 14: 5195 |
| Jin W, Brannan KW, Kapeli K, et al. (2023) HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence. Molecular Cell. 83: 2595-2611.e11 |
| Street L, Rothamel K, Brannan K, et al. (2023) Large-scale map of RNA binding protein interactomes across the mRNA life-cycle. Biorxiv : the Preprint Server For Biology |
| Kathman SG, Koo SJ, Lindsey GL, et al. (2023) Remodeling oncogenic transcriptomes by small molecules targeting NONO. Nature Chemical Biology |