Year |
Citation |
Score |
2019 |
Prins P, Smant G, Arends D, Mulligan MK, Williams RW, Jansen RC. Systems Genetics for Evolutionary Studies. Methods in Molecular Biology (Clifton, N.J.). 1910: 635-652. PMID 31278680 DOI: 10.1007/978-1-4939-9074-0_21 |
0.434 |
|
2019 |
Zych K, Gort G, Maliepaard CA, Jansen RC, Voorrips RE. FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support. Bmc Bioinformatics. 20: 148. PMID 30894135 DOI: 10.1186/S12859-019-2703-Y |
0.359 |
|
2017 |
Zych K, Snoek BL, Elvin M, Rodriguez M, Van der Velde KJ, Arends D, Westra HJ, Swertz MA, Poulin G, Kammenga JE, Breitling R, Jansen RC, Li Y. reGenotyper: Detecting mislabeled samples in genetic data. Plos One. 12: e0171324. PMID 28192439 DOI: 10.1371/Journal.Pone.0171324 |
0.349 |
|
2015 |
van der Graaf A, Wardenaar R, Neumann DA, Taudt A, Shaw RG, Jansen RC, Schmitz RJ, Colomé-Tatché M, Johannes F. Rate, spectrum, and evolutionary dynamics of spontaneous epimutations. Proceedings of the National Academy of Sciences of the United States of America. 112: 6676-81. PMID 25964364 DOI: 10.1073/Pnas.1424254112 |
0.332 |
|
2015 |
Westra HJ, Arends D, Esko T, Peters MJ, Schurmann C, Schramm K, Kettunen J, Yaghootkar H, Fairfax BP, Andiappan AK, Li Y, Fu J, Karjalainen J, Platteel M, Visschedijk M, ... ... Jansen RC, et al. Cell Specific eQTL Analysis without Sorting Cells. Plos Genetics. 11: e1005223. PMID 25955312 DOI: 10.1371/Journal.Pgen.1005223 |
0.336 |
|
2015 |
Zych K, Li Y, van der Velde JK, Joosen RV, Ligterink W, Jansen RC, Arends D. Pheno2Geno - High-throughput generation of genetic markers and maps from molecular phenotypes for crosses between inbred strains. Bmc Bioinformatics. 16: 51. PMID 25886992 DOI: 10.1186/S12859-015-0475-6 |
0.389 |
|
2015 |
Fehrmann RS, Karjalainen JM, Krajewska M, Westra HJ, Maloney D, Simeonov A, Pers TH, Hirschhorn JN, Jansen RC, Schultes EA, van Haagen HH, de Vries EG, te Meerman GJ, Wijmenga C, van Vugt MA, et al. Gene expression analysis identifies global gene dosage sensitivity in cancer. Nature Genetics. 47: 115-25. PMID 25581432 DOI: 10.1038/Ng.3173 |
0.353 |
|
2014 |
Pino Del Carpio D, Basnet RK, Arends D, Lin K, De Vos RC, Muth D, Kodde J, Boutilier K, Bucher J, Wang X, Jansen R, Bonnema G. Regulatory network of secondary metabolism in Brassica rapa: insight into the glucosinolate pathway. Plos One. 9: e107123. PMID 25222144 DOI: 10.1371/Journal.Pone.0107123 |
0.374 |
|
2014 |
Snoek LB, Joeri van der Velde K, Li Y, Jansen RC, Swertz MA, Kammenga JE. Worm variation made accessible: Take your shopping cart to store, link, and investigate! Worm. 3: e28357. PMID 24843834 DOI: 10.4161/worm.28357 |
0.342 |
|
2014 |
Rintisch C, Heinig M, Bauerfeind A, Schafer S, Mieth C, Patone G, Hummel O, Chen W, Cook S, Cuppen E, Colomé-Tatché M, Johannes F, Jansen RC, Neil H, Werner M, et al. Natural variation of histone modification and its impact on gene expression in the rat genome. Genome Research. 24: 942-53. PMID 24793478 DOI: 10.1101/Gr.169029.113 |
0.362 |
|
2014 |
Cortijo S, Wardenaar R, Colomé-Tatché M, Gilly A, Etcheverry M, Labadie K, Caillieux E, Hospital F, Aury JM, Wincker P, Roudier F, Jansen RC, Colot V, Johannes F. Mapping the epigenetic basis of complex traits. Science (New York, N.Y.). 343: 1145-8. PMID 24505129 DOI: 10.1126/Science.1248127 |
0.38 |
|
2013 |
Westra HJ, Peters MJ, Esko T, Yaghootkar H, Schurmann C, Kettunen J, Christiansen MW, Fairfax BP, Schramm K, Powell JE, Zhernakova A, Zhernakova DV, Veldink JH, Van den Berg LH, Karjalainen J, ... ... Jansen RC, et al. Systematic identification of trans eQTLs as putative drivers of known disease associations. Nature Genetics. 45: 1238-43. PMID 24013639 DOI: 10.1038/Ng.2756 |
0.372 |
|
2013 |
Joosen RV, Arends D, Li Y, Willems LA, Keurentjes JJ, Ligterink W, Jansen RC, Hilhorst HW. Identifying genotype-by-environment interactions in the metabolism of germinating arabidopsis seeds using generalized genetical genomics. Plant Physiology. 162: 553-66. PMID 23606598 DOI: 10.1104/Pp.113.216176 |
0.42 |
|
2013 |
Snoek LB, Van der Velde KJ, Arends D, Li Y, Beyer A, Elvin M, Fisher J, Hajnal A, Hengartner MO, Poulin GB, Rodriguez M, Schmid T, Schrimpf S, Xue F, Jansen RC, et al. WormQTL--public archive and analysis web portal for natural variation data in Caenorhabditis spp. Nucleic Acids Research. 41: D738-43. PMID 23180786 DOI: 10.1093/Nar/Gks1124 |
0.356 |
|
2012 |
Colomé-Tatché M, Cortijo S, Wardenaar R, Morgado L, Lahouze B, Sarazin A, Etcheverry M, Martin A, Feng S, Duvernois-Berthet E, Labadie K, Wincker P, Jacobsen SE, Jansen RC, Colot V, et al. Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 109: 16240-5. PMID 22988127 DOI: 10.1073/Pnas.1212955109 |
0.337 |
|
2012 |
Neto EC, Keller MP, Broman AF, Attie AD, Jansen RC, Broman KW, Yandell BS. Quantile-based permutation thresholds for quantitative trait loci hotspots. Genetics. 191: 1355-65. PMID 22661325 DOI: 10.1534/Genetics.112.139451 |
0.409 |
|
2012 |
Diekstra FP, Saris CG, van Rheenen W, Franke L, Jansen RC, van Es MA, van Vught PW, Blauw HM, Groen EJ, Horvath S, Estrada K, Rivadeneira F, Hofman A, Uitterlinden AG, Robberecht W, et al. Mapping of gene expression reveals CYP27A1 as a susceptibility gene for sporadic ALS. Plos One. 7: e35333. PMID 22509407 DOI: 10.1371/Journal.Pone.0035333 |
0.349 |
|
2012 |
Prins P, Smant G, Jansen RC. Genetical genomics for evolutionary studies. Methods in Molecular Biology (Clifton, N.J.). 856: 469-85. PMID 22399471 DOI: 10.1007/978-1-61779-585-5_19 |
0.457 |
|
2012 |
Durrant C, Swertz MA, Alberts R, Arends D, Möller S, Mott R, Prins P, van der Velde KJ, Jansen RC, Schughart K. Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs. Briefings in Bioinformatics. 13: 135-42. PMID 22396485 DOI: 10.1093/Bib/Bbr026 |
0.303 |
|
2012 |
Demirkan A, van Duijn CM, Ugocsai P, Isaacs A, Pramstaller PP, Liebisch G, Wilson JF, Johansson Ã…, Rudan I, Aulchenko YS, Kirichenko AV, Janssens AC, Jansen RC, Gnewuch C, Domingues FS, et al. Genome-wide association study identifies novel loci associated with circulating phospho- and sphingolipid concentrations. Plos Genetics. 8: e1002490. PMID 22359512 DOI: 10.1371/Journal.Pgen.1002490 |
0.347 |
|
2012 |
Arends D, van der Velde KJ, Prins P, Broman KW, Möller S, Jansen RC, Swertz MA. xQTL workbench: a scalable web environment for multi-level QTL analysis. Bioinformatics (Oxford, England). 28: 1042-4. PMID 22308096 DOI: 10.1093/Bioinformatics/Bts049 |
0.366 |
|
2012 |
Fu J, Wolfs MG, Deelen P, Westra HJ, Fehrmann RS, Te Meerman GJ, Buurman WA, Rensen SS, Groen HJ, Weersma RK, van den Berg LH, Veldink J, Ophoff RA, Snieder H, van Heel D, ... Jansen RC, et al. Unraveling the regulatory mechanisms underlying tissue-dependent genetic variation of gene expression. Plos Genetics. 8: e1002431. PMID 22275870 DOI: 10.1371/Journal.Pgen.1002431 |
0.346 |
|
2012 |
Joosen RV, Arends D, Willems LA, Ligterink W, Jansen RC, Hilhorst HW. Visualizing the genetic landscape of Arabidopsis seed performance. Plant Physiology. 158: 570-89. PMID 22158761 DOI: 10.1104/Pp.111.186676 |
0.384 |
|
2011 |
Fehrmann RS, Jansen RC, Veldink JH, Westra HJ, Arends D, Bonder MJ, Fu J, Deelen P, Groen HJ, Smolonska A, Weersma RK, Hofstra RM, Buurman WA, Rensen S, Wolfs MG, et al. Trans-eQTLs reveal that independent genetic variants associated with a complex phenotype converge on intermediate genes, with a major role for the HLA. Plos Genetics. 7: e1002197. PMID 21829388 DOI: 10.1371/Journal.Pgen.1002197 |
0.396 |
|
2011 |
Westra HJ, Jansen RC, Fehrmann RS, te Meerman GJ, van Heel D, Wijmenga C, Franke L. MixupMapper: correcting sample mix-ups in genome-wide datasets increases power to detect small genetic effects. Bioinformatics (Oxford, England). 27: 2104-11. PMID 21653519 DOI: 10.1093/Bioinformatics/Btr323 |
0.337 |
|
2011 |
Roux F, Colomé-Tatché M, Edelist C, Wardenaar R, Guerche P, Hospital F, Colot V, Jansen RC, Johannes F. Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature. Genetics. 188: 1015-7. PMID 21596900 DOI: 10.1534/Genetics.111.128744 |
0.351 |
|
2010 |
Arends D, Prins P, Jansen RC, Broman KW. R/qtl: high-throughput multiple QTL mapping. Bioinformatics (Oxford, England). 26: 2990-2. PMID 20966004 DOI: 10.1093/Bioinformatics/Btq565 |
0.355 |
|
2010 |
Seinen E, Burgerhof JG, Jansen RC, Sibon OC. RNAi experiments in D. melanogaster: solutions to the overlooked problem of off-targets shared by independent dsRNAs. Plos One. 5. PMID 20957038 DOI: 10.1371/Journal.Pone.0013119 |
0.304 |
|
2010 |
Li Y, Tesson BM, Churchill GA, Jansen RC. Critical reasoning on causal inference in genome-wide linkage and association studies. Trends in Genetics : Tig. 26: 493-8. PMID 20951462 DOI: 10.1016/J.Tig.2010.09.002 |
0.403 |
|
2010 |
Tesson BM, Breitling R, Jansen RC. DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules. Bmc Bioinformatics. 11: 497. PMID 20925918 DOI: 10.1186/1471-2105-11-497 |
0.324 |
|
2010 |
Li Y, Breitling R, Snoek LB, van der Velde KJ, Swertz MA, Riksen J, Jansen RC, Kammenga JE. Global genetic robustness of the alternative splicing machinery in Caenorhabditis elegans. Genetics. 186: 405-10. PMID 20610403 DOI: 10.1534/Genetics.110.119677 |
0.427 |
|
2010 |
Swertz MA, Velde KJ, Tesson BM, Scheltema RA, Arends D, Vera G, Alberts R, Dijkstra M, Schofield P, Schughart K, Hancock JM, Smedley D, Wolstencroft K, Goble C, de Brock EO, ... ... Jansen RC, et al. XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments. Genome Biology. 11: R27. PMID 20214801 DOI: 10.1186/Gb-2010-11-3-R27 |
0.327 |
|
2010 |
Johannes F, Wardenaar R, Colomé-Tatché M, Mousson F, de Graaf P, Mokry M, Guryev V, Timmers HT, Cuppen E, Jansen RC. Comparing genome-wide chromatin profiles using ChIP-chip or ChIP-seq. Bioinformatics (Oxford, England). 26: 1000-6. PMID 20208068 DOI: 10.1093/Bioinformatics/Btq087 |
0.334 |
|
2009 |
Gerrits A, Li Y, Tesson BM, Bystrykh LV, Weersing E, Ausema A, Dontje B, Wang X, Breitling R, Jansen RC, de Haan G. Expression quantitative trait loci are highly sensitive to cellular differentiation state. Plos Genetics. 5: e1000692. PMID 19834560 DOI: 10.1371/Journal.Pgen.1000692 |
0.406 |
|
2009 |
Franke L, Jansen RC. eQTL analysis in humans. Methods in Molecular Biology (Clifton, N.J.). 573: 311-28. PMID 19763935 DOI: 10.1007/978-1-60761-247-6_17 |
0.413 |
|
2009 |
Tesson BM, Jansen RC. eQTL analysis in mice and rats. Methods in Molecular Biology (Clifton, N.J.). 573: 285-309. PMID 19763934 DOI: 10.1007/978-1-60761-247-6_16 |
0.442 |
|
2009 |
Li Y, Swertz MA, Vera G, Fu J, Breitling R, Jansen RC. designGG: an R-package and web tool for the optimal design of genetical genomics experiments. Bmc Bioinformatics. 10: 188. PMID 19538731 DOI: 10.1186/1471-2105-10-188 |
0.356 |
|
2009 |
Jansen RC, Tesson BM, Fu J, Yang Y, McIntyre LM. Defining gene and QTL networks. Current Opinion in Plant Biology. 12: 241-6. PMID 19196544 DOI: 10.1016/J.Pbi.2009.01.003 |
0.412 |
|
2009 |
Fu J, Keurentjes JJ, Bouwmeester H, America T, Verstappen FW, Ward JL, Beale MH, de Vos RC, Dijkstra M, Scheltema RA, Johannes F, Koornneef M, Vreugdenhil D, Breitling R, Jansen RC. System-wide molecular evidence for phenotypic buffering in Arabidopsis. Nature Genetics. 41: 166-7. PMID 19169256 DOI: 10.1038/Ng.308 |
0.358 |
|
2009 |
Heap GA, Trynka G, Jansen RC, Bruinenberg M, Swertz MA, Dinesen LC, Hunt KA, Wijmenga C, Vanheel DA, Franke L. Complex nature of SNP genotype effects on gene expression in primary human leucocytes. Bmc Medical Genomics. 2: 1. PMID 19128478 DOI: 10.1186/1755-8794-2-1 |
0.344 |
|
2008 |
Breitling R, Li Y, Tesson BM, Fu J, Wu C, Wiltshire T, Gerrits A, Bystrykh LV, de Haan G, Su AI, Jansen RC. Genetical genomics: spotlight on QTL hotspots. Plos Genetics. 4: e1000232. PMID 18949031 DOI: 10.1371/Journal.Pgen.1000232 |
0.436 |
|
2008 |
Johannes F, Colot V, Jansen RC. Epigenome dynamics: a quantitative genetics perspective. Nature Reviews. Genetics. 9: 883-90. PMID 18927581 DOI: 10.1038/Nrg2467 |
0.338 |
|
2008 |
Lam AC, Fu J, Jansen RC, Haley CS, de Koning DJ. Optimal design of genetic studies of gene expression with two-color microarrays in outbred crosses. Genetics. 180: 1691-8. PMID 18791249 DOI: 10.1534/Genetics.108.090308 |
0.383 |
|
2008 |
Li Y, Breitling R, Jansen RC. Generalizing genetical genomics: getting added value from environmental perturbation. Trends in Genetics : Tig. 24: 518-24. PMID 18774198 DOI: 10.1016/J.Tig.2008.08.001 |
0.376 |
|
2008 |
Alberts R, Vera G, Jansen RC. affyGG: computational protocols for genetical genomics with Affymetrix arrays. Bioinformatics (Oxford, England). 24: 433-4. PMID 18086686 DOI: 10.1093/Bioinformatics/Btm614 |
0.377 |
|
2007 |
Nolte IM, de Vries AR, Spijker GT, Jansen RC, Brinza D, Zelikovsky A, Te Meerman GJ. Association testing by haplotype-sharing methods applicable to whole-genome analysis. Bmc Proceedings. 1: S129. PMID 18466471 DOI: 10.1186/1753-6561-1-S1-S129 |
0.351 |
|
2007 |
Alberts R, Terpstra P, Li Y, Breitling R, Nap JP, Jansen RC. Sequence polymorphisms cause many false cis eQTLs. Plos One. 2: e622. PMID 17637838 DOI: 10.1371/Journal.Pone.0000622 |
0.385 |
|
2007 |
Alberts R, Terpstra P, Hardonk M, Bystrykh LV, de Haan G, Breitling R, Nap JP, Jansen RC. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat. Bmc Bioinformatics. 8: 132. PMID 17448222 DOI: 10.1186/1471-2105-8-132 |
0.325 |
|
2007 |
Fu J, Swertz MA, Keurentjes JJ, Jansen RC. MetaNetwork: a computational protocol for the genetic study of metabolic networks. Nature Protocols. 2: 685-94. PMID 17406631 DOI: 10.1038/Nprot.2007.96 |
0.34 |
|
2007 |
Keurentjes JJ, Fu J, Terpstra IR, Garcia JM, van den Ackerveken G, Snoek LB, Peeters AJ, Vreugdenhil D, Koornneef M, Jansen RC. Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci. Proceedings of the National Academy of Sciences of the United States of America. 104: 1708-13. PMID 17237218 DOI: 10.1073/Pnas.0610429104 |
0.432 |
|
2006 |
Li Y, Alvarez OA, Gutteling EW, Tijsterman M, Fu J, Riksen JA, Hazendonk E, Prins P, Plasterk RH, Jansen RC, Breitling R, Kammenga JE. Mapping determinants of gene expression plasticity by genetical genomics in C. elegans. Plos Genetics. 2: e222. PMID 17196041 DOI: 10.1371/Journal.Pgen.0020222 |
0.411 |
|
2006 |
Keurentjes JJ, Fu J, de Vos CH, Lommen A, Hall RD, Bino RJ, van der Plas LH, Jansen RC, Vreugdenhil D, Koornneef M. The genetics of plant metabolism. Nature Genetics. 38: 842-9. PMID 16751770 DOI: 10.1038/Ng1815 |
0.351 |
|
2006 |
Fu J, Jansen RC. Optimal design and analysis of genetic studies on gene expression. Genetics. 172: 1993-9. PMID 16361243 DOI: 10.1534/Genetics.105.047001 |
0.405 |
|
2006 |
Nyangoma SO, Fung WK, Jansen RC. Identifying influential multinomial observations by perturbation Computational Statistics and Data Analysis. 50: 2799-2821. DOI: 10.1016/J.Csda.2005.04.023 |
0.311 |
|
2005 |
Alberts R, Terpstra P, Bystrykh LV, de Haan G, Jansen RC. A statistical multiprobe model for analyzing cis and trans genes in genetical genomics experiments with short-oligonucleotide arrays. Genetics. 171: 1437-9. PMID 16079228 DOI: 10.1534/Genetics.105.045930 |
0.389 |
|
2005 |
Alberts R, Fu J, Swertz MA, Lubbers LA, Albers CJ, Jansen RC. Combining microarrays and genetic analysis. Briefings in Bioinformatics. 6: 135-45. PMID 15975223 DOI: 10.1093/Bib/6.2.135 |
0.404 |
|
2005 |
Bystrykh L, Weersing E, Dontje B, Sutton S, Pletcher MT, Wiltshire T, Su AI, Vellenga E, Wang J, Manly KF, Lu L, Chesler EJ, Alberts R, Jansen RC, Williams RW, et al. Uncovering regulatory pathways that affect hematopoietic stem cell function using 'genetical genomics'. Nature Genetics. 37: 225-32. PMID 15711547 DOI: 10.1038/Ng1497 |
0.392 |
|
2005 |
Spijker GT, Nolte IM, Jansen RC, Te Meerman GJ. Genetic association studies in complex disease: disentangling additional predisposing loci from associated neutral loci using a constrained - permutation approach. Annals of Human Genetics. 69: 90-101. PMID 15638830 DOI: 10.1046/J.1529-8817.2004.00129.X |
0.366 |
|
2004 |
Churchill GA, Airey DC, Allayee H, Angel JM, Attie AD, Beatty J, Beavis WD, Belknap JK, Bennett B, Berrettini W, Bleich A, Bogue M, Broman KW, Buck KJ, Buckler E, ... ... Jansen RC, et al. The Collaborative Cross, a community resource for the genetic analysis of complex traits. Nature Genetics. 36: 1133-7. PMID 15514660 DOI: 10.1038/Ng1104-1133 |
0.355 |
|
2004 |
Jansen RC, Nap JP. Regulating gene expression: surprises still in store. Trends in Genetics : Tig. 20: 223-5. PMID 15109773 DOI: 10.1016/J.Tig.2004.03.002 |
0.362 |
|
2004 |
Swertz MA, De Brock EO, Van Hijum SA, De Jong A, Buist G, Baerends RJ, Kok J, Kuipers OP, Jansen RC. Molecular Genetics Information System (MOLGENIS): alternatives in developing local experimental genomics databases. Bioinformatics (Oxford, England). 20: 2075-83. PMID 15059831 DOI: 10.1093/Bioinformatics/Bth206 |
0.319 |
|
2003 |
Abiola O, Angel JM, Avner P, Bachmanov AA, Belknap JK, Bennett B, Blankenhorn EP, Blizard DA, Bolivar V, Brockmann GA, Buck KJ, Bureau JF, Casley WL, Chesler EJ, Cheverud JM, ... ... Jansen RC, et al. The nature and identification of quantitative trait loci: a community's view. Nature Reviews. Genetics. 4: 911-6. PMID 14634638 DOI: 10.1038/Nrg1206 |
0.377 |
|
2003 |
Jansen RC. Studying complex biological systems using multifactorial perturbation. Nature Reviews. Genetics. 4: 145-51. PMID 12560811 DOI: 10.1038/Nrg996 |
0.378 |
|
2003 |
Jansen RC, Jannink J, Beavis WD. Mapping Quantitative Trait Loci in Plant Breeding Populations Crop Science. 43: 829. DOI: 10.2135/Cropsci2003.0829 |
0.404 |
|
2002 |
Bink MCAM, Uimari P, Sillanpää MJ, Janss LLG, Jansen RC. Multiple QTL mapping in related plant populations via a pedigree-analysis approach Theoretical and Applied Genetics. 104: 751-762. DOI: 10.1007/S00122-001-0796-X |
0.384 |
|
2001 |
Jannink J, Bink MC, Jansen RC. Using complex plant pedigrees to map valuable genes. Trends in Plant Science. 6: 337-42. PMID 11495765 DOI: 10.1016/S1360-1385(01)02017-9 |
0.381 |
|
2001 |
Jansen RC, Nap JP. Genetical genomics: the added value from segregation. Trends in Genetics : Tig. 17: 388-91. PMID 11418218 DOI: 10.1016/S0168-9525(01)02310-1 |
0.408 |
|
2001 |
Maliepaard C, Sillanpää MJ, Van Ooijen JW, Jansen RC, Arjas E. Bayesian versus frequentist analysis of multiple quantitative trait loci with an application to an outbred apple cross Theoretical and Applied Genetics. 103: 1243-1253. DOI: 10.1007/S001220100720 |
0.365 |
|
2000 |
Visscher P, Whittaker J, Jansen R. Mapping multiple QTL of different effects: comparison of a simple sequential testing strategy and multiple QTL mapping Molecular Breeding. 6: 11-24. DOI: 10.1023/A:1009612308004 |
0.388 |
|
1999 |
Johnson DL, Jansen RC, Van Arendonk JAM. Mapping quantitative trait loci in a selectively genotyped outbred population using a mixture model approach Genetical Research. 73: 75-83. DOI: 10.1017/S0016672398003607 |
0.367 |
|
1998 |
Feldmann AM, van Gemert GJ, van de Vegte-Bolmer MG, Jansen RC. Genetics of refractoriness to Plasmodium falciparum in the mosquito Anopheles stephensi. Medical and Veterinary Entomology. 12: 302-12. PMID 9737603 DOI: 10.1046/J.1365-2915.1998.00122.X |
0.343 |
|
1997 |
van Der Schaar W, Alonso-Blanco C, Léon-Kloosterziel KM, Jansen RC, van Ooijen JW, Koornneef M. QTL analysis of seed dormancy in Arabidopsis using recombinant inbred lines and MQM mapping. Heredity. 79: 190-200. PMID 9279013 DOI: 10.1038/Hdy.1997.142 |
0.355 |
|
1996 |
Fijneman RJ, de Vries SS, Jansen RC, Demant P. Complex interactions of new quantitative trait loci, Sluc1, Sluc2, Sluc3, and Sluc4, that influence the susceptibility to lung cancer in the mouse. Nature Genetics. 14: 465-7. PMID 8944028 DOI: 10.1038/Ng1296-465 |
0.333 |
|
1996 |
Jansen RC. Complex plant traits: Time for polygenic analysis Trends in Plant Science. 1: 89-94. DOI: 10.1016/S1360-1385(96)80040-9 |
0.366 |
|
1995 |
Jansen RC, Van Ooijen JW, Stam P, Lister C, Dean C. Genotype-by-environment interaction in genetic mapping of multiple quantitative trait loci. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 91: 33-7. PMID 24169664 DOI: 10.1007/Bf00220855 |
0.36 |
|
1995 |
Mlynarova L, Jansen RC, Conner AJ, Stiekema WJ, Nap JP. The MAR-Mediated Reduction in Position Effect Can Be Uncoupled from Copy Number-Dependent Expression in Transgenic Plants. The Plant Cell. 7: 599-609. PMID 12242378 DOI: 10.1105/Tpc.7.5.599 |
0.308 |
|
1995 |
Zijlstra S, Jansen RC, Groot SPC. The relationship between powdery mildew (Sphaerotheca fuliginea) resistance and leaf chlorosis sensitivity in cucumber (Cucumis sativus) studied in single seed descent lines Euphytica. 81: 193-198. DOI: 10.1007/Bf00025433 |
0.302 |
|
1992 |
Jansen R. A general mixture model for mapping quantitative trait loci by using molecular markers. Theoretical and Applied Genetics. 85: 252-260. PMID 24197312 DOI: 10.1007/Bf00222867 |
0.385 |
|
1992 |
Jansen R. On the selection for specific genes in doubled haploids Heredity. 69: 92-95. DOI: 10.1038/Hdy.1992.98 |
0.32 |
|
Low-probability matches (unlikely to be authored by this person) |
1990 |
Jansen R, Jansen J. On the selection for specific genes by single seed descent. Euphytica. 51: 131-140. DOI: 10.1007/Bf00022444 |
0.3 |
|
1994 |
Mlynarova L, Loonen A, Heldens J, Jansen RC, Keizer P, Stiekema WJ, Nap JP. Reduced position effect in mature transgenic plants conferred by the chicken lysozyme matrix-associated region Plant Cell. 6: 417-426. DOI: 10.1105/Tpc.6.3.417 |
0.295 |
|
2010 |
Swertz MA, Dijkstra M, Adamusiak T, van der Velde JK, Kanterakis A, Roos ET, Lops J, Thorisson GA, Arends D, Byelas G, Muilu J, Brookes AJ, de Brock EO, Jansen RC, Parkinson H. The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. Bmc Bioinformatics. 11: S12. PMID 21210979 DOI: 10.1186/1471-2105-11-S12-S12 |
0.293 |
|
2002 |
Balding DJ, Carothers AD, Marchini JL, Cardon LR, Vetta A, Griffiths B, Weir BS, Hill WG, Goldstein D, Strimmer K, Myers S, Beaumont MA, Glasbey CA, Mayer CD, Richardson S, ... ... Jansen RC, et al. Discussion on the meeting on 'statistical modelling and analysis of genetic data' Journal of the Royal Statistical Society. Series B: Statistical Methodology. 64: 737-775. DOI: 10.1111/1467-9868.00359 |
0.29 |
|
2011 |
Scheltema RA, Jankevics A, Jansen RC, Swertz MA, Breitling R. PeakML/mzMatch: a file format, Java library, R library, and tool-chain for mass spectrometry data analysis. Analytical Chemistry. 83: 2786-93. PMID 21401061 DOI: 10.1021/Ac2000994 |
0.289 |
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2016 |
Zych K, Maliepaard CA, Voorrips RE, Gort G, Vetten Nd, Hopman JC, Haas JMd, Noback M, Wedema R, Nap J, Jansen RC. Improving potato breeding with computational and functional genomics F1000research. 5. DOI: 10.7490/F1000Research.1113020.1 |
0.285 |
|
2009 |
Scheltema RA, Decuypere S, Dujardin JC, Watson DG, Jansen RC, Breitling R. Simple data-reduction method for high-resolution LC - MS data in metabolomics Bioanalysis. 1: 1551-1557. PMID 21083103 DOI: 10.4155/Bio.09.146 |
0.278 |
|
2000 |
Aharoni A, Keizer LC, Bouwmeester HJ, Sun Z, Alvarez-Huerta M, Verhoeven HA, Blaas J, van Houwelingen AM, De Vos RC, van der Voet H, Jansen RC, Guis M, Mol J, Davis RW, Schena M, et al. Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. The Plant Cell. 12: 647-62. PMID 10810141 DOI: 10.1105/Tpc.12.5.647 |
0.278 |
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1995 |
Colon LT, Jansen RC, Budding DJ. Partial resistance to late blight (Phytophthora infestans) in hybrid progenies of four South American Solanum species crossed with diploid S. tuberosum. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 90: 691-8. PMID 24174029 DOI: 10.1007/Bf00222135 |
0.274 |
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1993 |
Nap J, Keizer P, Jansen R. First-Generation Transgenic Plants and Statistics Plant Molecular Biology Reporter. 11: 156-164. DOI: 10.1007/Bf02670473 |
0.273 |
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2007 |
Nyangoma SO, van Kampen AA, Reijmers TH, Govorukhina NI, van der Zee AG, Billingham LJ, Bischoff R, Jansen RC. Multiple testing issues in discriminating compound-related peaks and chromatograms from high frequency noise, spikes and solvent-based noise in LC-MS data sets. Statistical Applications in Genetics and Molecular Biology. 6: Article23. PMID 17910529 DOI: 10.2202/1544-6115.1295 |
0.27 |
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2007 |
Dijkstra M, Vonk RJ, Jansen RC. SELDI-TOF mass spectra: a view on sources of variation. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 847: 12-23. PMID 17118720 DOI: 10.1016/J.Jchromb.2006.11.004 |
0.268 |
|
2009 |
Dijkstra M, Jansen RC. Optimal analysis of complex protein mass spectra. Proteomics. 9: 3869-76. PMID 19639597 DOI: 10.1002/Pmic.200701064 |
0.266 |
|
1991 |
Lindhout P, Pet G, Jansen R, Jansen H. Genetic differences in growth within and between Lycopersicon species Euphytica. 57: 259-265. DOI: 10.1007/Bf00039672 |
0.265 |
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2006 |
Govorukhina NI, Reijmers TH, Nyangoma SO, van der Zee AG, Jansen RC, Bischoff R. Analysis of human serum by liquid chromatography-mass spectrometry: improved sample preparation and data analysis. Journal of Chromatography. A. 1120: 142-50. PMID 16574134 DOI: 10.1016/J.Chroma.2006.02.088 |
0.264 |
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2011 |
Seinen E, Burgerhof JG, Jansen RC, Sibon OC. RNAi-induced off-target effects in Drosophila melanogaster: frequencies and solutions. Briefings in Functional Genomics. 10: 206-14. PMID 21596801 DOI: 10.1093/Bfgp/Elr017 |
0.263 |
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1996 |
Scholten OE, Jansen RC, Keizer LCP, Bock TSMD, Lange W. Major genes for resistance to beet necrotic yellow vein virus (BNYVV) in Beta vulgaris Euphytica. 91: 331-339. DOI: 10.1007/Bf00033095 |
0.261 |
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2002 |
Jansen RC, Nap JP, Mlynárová L. Errors in genomics and proteomics. Nature Biotechnology. 20: 19. PMID 11753351 DOI: 10.1038/Nbt0102-19B |
0.26 |
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2012 |
Lendvai Ã, Johannes F, Grimm C, Eijsink JJ, Wardenaar R, Volders HH, Klip HG, Hollema H, Jansen RC, Schuuring E, Wisman GB, van der Zee AG. Genome-wide methylation profiling identifies hypermethylated biomarkers in high-grade cervical intraepithelial neoplasia. Epigenetics : Official Journal of the Dna Methylation Society. 7: 1268-78. PMID 23018867 DOI: 10.4161/Epi.22301 |
0.259 |
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2008 |
Scheltema RA, Kamleh A, Wildridge D, Ebikeme C, Watson DG, Barrett MP, Jansen RC, Breitling R. Increasing the mass accuracy of high-resolution LC-MS data using background ions: a case study on the LTQ-Orbitrap. Proteomics. 8: 4647-56. PMID 18937253 DOI: 10.1002/Pmic.200800314 |
0.259 |
|
2011 |
Trelles O, Prins P, Snir M, Jansen RC. Big data, but are we ready? Nature Reviews. Genetics. 12: 224. PMID 21301471 DOI: 10.1038/Nrg2857-C1 |
0.255 |
|
2002 |
Boer MP, Ter Braak CJ, Jansen RC. A penalized likelihood method for mapping epistatic quantitative trait Loci with one-dimensional genome searches. Genetics. 162: 951-60. PMID 12399402 |
0.253 |
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2006 |
Albers CJ, Jansen RC, Kok J, Kuipers OP, van Hijum SA. SIMAGE: simulation of DNA-microarray gene expression data. Bmc Bioinformatics. 7: 205. PMID 16613602 DOI: 10.1186/1471-2105-7-205 |
0.253 |
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2013 |
Lodder EM, Beekman L, Arends D, Adriaens ME, Scicluna BP, Jansen R, Bezzina CR. Multiple QTL mapping of cardiac collagen deposition in an F2 population of Scn5a mutant mice reveals interaction between Fgf1 and Pdlim3, Gpr158 & Itga6 European Heart Journal. 34: 487-487. DOI: 10.1093/Eurheartj/Eht309.2602 |
0.251 |
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2012 |
Lendvai A, Johannes F, Grimm C, Eijsink JJ, Wardenaar R, Volders HH, Klip HG, Hollema H, Jansen RC, Schuuring E, Zee AGvd, Wisman GBA. Abstract 5011: Genome-wide methylation profiling identifies hypermethylated biomarkers in high-grade cervical intraepithelial neoplasia Cancer Research. 72: 5011-5011. DOI: 10.1158/1538-7445.Am2012-5011 |
0.249 |
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2010 |
Nieselt K, Battke F, Herbig A, Bruheim P, Wentzel A, Jakobsen ØM, Sletta H, Alam MT, Merlo ME, Moore J, Omara WA, Morrissey ER, Juarez-Hermosillo MA, Rodríguez-García A, Nentwich M, ... ... Jansen RC, et al. The dynamic architecture of the metabolic switch in Streptomyces coelicolor. Bmc Genomics. 11: 10. PMID 20053288 DOI: 10.1186/1471-2164-11-10 |
0.246 |
|
2014 |
van der Velde KJ, de Haan M, Zych K, Arends D, Snoek LB, Kammenga JE, Jansen RC, Swertz MA, Li Y. WormQTLHD--a web database for linking human disease to natural variation data in C. elegans. Nucleic Acids Research. 42: D794-801. PMID 24217915 DOI: 10.1093/nar/gkt1044 |
0.244 |
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2008 |
Vera G, Jansen RC, Suppi RL. R/parallel--speeding up bioinformatics analysis with R. Bmc Bioinformatics. 9: 390. PMID 18808714 DOI: 10.1186/1471-2105-9-390 |
0.243 |
|
2006 |
Dijkstra M, Roelofsen H, Vonk RJ, Jansen RC. Peak quantification in surface-enhanced laser desorption/ionization by using mixture models. Proteomics. 6: 5106-16. PMID 16955530 DOI: 10.1002/Pmic.200600181 |
0.243 |
|
2015 |
Prins P, de Ligt J, Tarasov A, Jansen RC, Cuppen E, Bourne PE. Toward effective software solutions for big biology. Nature Biotechnology. 33: 686-7. PMID 26154002 DOI: 10.1038/Nbt.3240 |
0.243 |
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1992 |
Valk Pvd, Scholten OE, Verstappen F, Jansen R, Dons JJM. High frequency somatic embryogenesis and plant regeneration from zygotic embryo-derived callus cultures of three Allium species Plant Cell Tissue and Organ Culture. 30: 181-191. DOI: 10.1007/Bf00040020 |
0.242 |
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2007 |
Swertz MA, Jansen RC. Beyond standardization: dynamic software infrastructures for systems biology. Nature Reviews. Genetics. 8: 235-43. PMID 17297480 DOI: 10.1038/Nrg2048 |
0.24 |
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2006 |
Park BG, Haq E, Banerjee T, Min BC, Lodder JC, Jansen R. Excitation and transport of hot holes in a magnetic tunnel transistor Journal of Applied Physics. 99. DOI: 10.1063/1.2177202 |
0.24 |
|
2007 |
Park BG, Banerjee T, Lodder JC, Jansen R. Tunnel spin polarization versus energy for clean and doped Al2O3 barriers. Physical Review Letters. 99: 217206. PMID 18233249 DOI: 10.1103/Physrevlett.99.217206 |
0.235 |
|
2005 |
Haq E, Banerjee T, Siekman MH, Lodder JC, Jansen R. Ballistic hole magnetic microscopy Applied Physics Letters. 86. DOI: 10.1063/1.1864243 |
0.234 |
|
1993 |
Jansen RC. Maximum Likelihood in a Generalized Linear Finite Mixture Model by Using the EM Algorithm Biometrics. 49: 227-231. DOI: 10.2307/2532616 |
0.232 |
|
2006 |
Haq E, Banerjee T, Siekman MH, Lodder JC, Jansen R. Excitation and spin-transport of hot holes in ballistic hole magnetic microscopy Applied Physics Letters. 88: 242501. DOI: 10.1063/1.2212066 |
0.232 |
|
2005 |
Banerjee T, Haq E, Siekman MH, Lodder JC, Jansen R. Spin filtering of hot holes in a metallic ferromagnet. Physical Review Letters. 94: 27204. PMID 15698224 DOI: 10.1103/Physrevlett.94.027204 |
0.23 |
|
2014 |
Sharma S, Spiesser A, Dash SP, Iba S, Watanabe S, Van Wees BJ, Saito H, Yuasa S, Jansen R. Anomalous scaling of spin accumulation in ferromagnetic tunnel devices with silicon and germanium Physical Review B - Condensed Matter and Materials Physics. 89. DOI: 10.1103/Physrevb.89.075301 |
0.23 |
|
2012 |
Jansen R, Dash SP, Sharma S, Min BC. Silicon spintronics with ferromagnetic tunnel devices Semiconductor Science and Technology. 27: 83001. DOI: 10.1088/0268-1242/27/8/083001 |
0.228 |
|
1996 |
Bonnier FJM, Jansen RC, Tuyl JMv. Long term lily scale bulblet storage: effects of temperature and storage in polyethylene bags Annals of Applied Biology. 129: 161-169. DOI: 10.1111/J.1744-7348.1996.Tb05740.X |
0.228 |
|
2005 |
Park BG, Banerjee T, Min BC, Sanderink JGM, Lodder JC, Jansen R. Temperature dependence of magnetocurrent in a magnetic tunnel transistor Journal of Applied Physics. 98. DOI: 10.1063/1.2125120 |
0.226 |
|
2004 |
Haq E, Gokcan H, Banerjee T, Postma FM, Siekman MH, Jansen R, Lodder JC. Nanoscale magnetic hysteresis of Ni80Fe20/Au/Co trilayers using ballistic electron magnetic microscopy Journal of Applied Physics. 95: 6930-6932. DOI: 10.1063/1.1652394 |
0.225 |
|
1993 |
Jansen RC, Den Nijs APM. A statistical mixture model for estimating the proportion of unreduced pollen grains in perennial ryegrass (Lolium perenne L.) via the size of pollen grains Euphytica. 70: 205-215. DOI: 10.1007/Bf00023761 |
0.222 |
|
1991 |
Drijfhout E, Oeveren JCv, Jansen R. A non-destructive selection method for faster growth at suboptimal temperature in common bean (Phaseolus vulgaris) Euphytica. 58: 65-70. DOI: 10.1007/Bf00035341 |
0.219 |
|
2006 |
Park BG, Banerjee T, Min BC, Lodder JC, Jansen R. Tunnel spin polarization of Ni80Fe20/SiO2 probed with a magnetic tunnel transistor Physical Review B. 73. DOI: 10.1103/Physrevb.73.172402 |
0.218 |
|
2007 |
Jansen R, Banerjee T, Park BG, Lodder JC. Probing momentum distributions in magnetic tunnel junctions via hot-electron decay Applied Physics Letters. 90: 192503. DOI: 10.1063/1.2737128 |
0.218 |
|
2005 |
Banerjee T, Haq E, Siekman MH, Lodder JC, Jansen R. Ballistic hole emission microscopy on metal-semiconductor interfaces Ieee Transactions On Magnetics. 41: 2642-2644. DOI: 10.1109/Tmag.2005.854738 |
0.217 |
|
2006 |
Gokcan H, Lodder JC, Jansen R. Effect of nonmagnetic spacer on hot-electron transport in the spin-valve transistor Materials Science and Engineering B-Advanced Functional Solid-State Materials. 126: 129-132. DOI: 10.1016/J.Mseb.2005.09.034 |
0.214 |
|
2007 |
Banerjee T, Lodder JC, Jansen R. Origin of the spin-asymmetry of hot-electron transmission in Fe Physical Review B - Condensed Matter and Materials Physics. 76. DOI: 10.1103/Physrevb.76.140407 |
0.211 |
|
1996 |
Jansen RC. A general Monte Carlo method for mapping multiple quantitative trait loci. Genetics. 142: 305-11. PMID 8770607 |
0.21 |
|
1994 |
Jansen RC, Stam P. High resolution of quantitative traits into multiple loci via interval mapping. Genetics. 136: 1447-55. PMID 8013917 |
0.209 |
|
2004 |
Postma FM, Ramaneti R, Banerjee T, Gokcan H, Haq E, Blank DHA, Jansen R, Lodder JC. Epitaxial diodes of a half-metallic ferromagnet on an oxide semiconductor Journal of Applied Physics. 95: 7324-7326. DOI: 10.1063/1.1669255 |
0.206 |
|
1997 |
Bonnier FJM, Jansen RC, Tuyl JMv. Freezing tolerance of bulb scales of lily cultivars: Effects of freezing and storage duration and partial dehydration. Journal of Plant Physiology. 151: 627-632. DOI: 10.1016/S0176-1617(97)80240-4 |
0.205 |
|
1998 |
Jansen RC, Johnson DL, Van Arendonk JA. A mixture model approach to the mapping of quantitative trait loci in complex populations with an application to multiple cattle families. Genetics. 148: 391-9. PMID 9475749 |
0.192 |
|
2003 |
Jansen RC. Book Review: S.W. Looney (2001). Biostatistical Methods Acta Biotheoretica. 51: 65-66. DOI: 10.1023/A:1023008623888 |
0.188 |
|
1997 |
Nap JP, Conner AJ, Mlynárová L, Stiekema WJ, Jansen RC. Dissection of a synthesized quantitative trait to characterize transgene interactions. Genetics. 147: 315-20. PMID 9286691 |
0.166 |
|
1998 |
Fijneman RJ, Jansen RC, van der Valk MA, Demant P. High frequency of interactions between lung cancer susceptibility genes in the mouse: mapping of Sluc5 to Sluc14. Cancer Research. 58: 4794-8. PMID 9809979 |
0.166 |
|
1994 |
Jansen RC. Controlling the type I and type II errors in mapping quantitative trait loci. Genetics. 138: 871-81. PMID 7851782 |
0.141 |
|
2001 |
Jansen RC, Geerlings H, Van Oeveren AJ, Van Schaik RC. A comment on codominant scoring of AFLP markers. Genetics. 158: 925-6. PMID 11430354 |
0.116 |
|
2002 |
Mlynárová L, Loonen A, Mietkiewska E, Jansen RC, Nap JP. Assembly of two transgenes in an artificial chromatin domain gives highly coordinated expression in tobacco. Genetics. 160: 727-40. PMID 11861574 |
0.065 |
|
2023 |
Ravenstijn M, du Bois G, Jansen RC, Liu C, Luyten GPM, van Leeuwen R, Dickman MM, Reus NJ, Yzer S, Klaver CCW. A view from the clinic - Perspectives from Dutch patients and professionals on high myopia care. Ophthalmic & Physiological Optics : the Journal of the British College of Ophthalmic Opticians (Optometrists). PMID 36648005 DOI: 10.1111/opo.13091 |
0.049 |
|
2007 |
Jansen RC, van Rhijn LW, Duinkerke E, van Ooij A. Predictability of the spontaneous lumbar curve correction after selective thoracic fusion in idiopathic scoliosis. European Spine Journal : Official Publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society. 16: 1335-42. PMID 17294054 DOI: 10.1007/s00586-007-0320-3 |
0.04 |
|
2014 |
Jansen RC. Re: "The rise and fall of the 'minimum clinically important difference'". The Spine Journal : Official Journal of the North American Spine Society. 14: 726. PMID 24655561 DOI: 10.1016/j.spinee.2010.06.022 |
0.034 |
|
2012 |
Vieira EB, Garcia JB, Silva AA, Araújo RL, Jansen RC, Bertrand AL. Chronic pain, associated factors, and impact on daily life: are there differences between the sexes? Cadernos De SaúDe PúBlica. 28: 1459-67. PMID 22892966 |
0.026 |
|
2015 |
Huitema GC, Jansen RC, van Ooij A, Punt IM, van Rhijn LW. Predictability of spontaneous thoracic curve correction after anterior thoracolumbar correction and fusion in adolescent idiopathic scoliosis. A retrospective study on a consecutive series of 29 patients with a minimum follow-up of 2 years. The Spine Journal : Official Journal of the North American Spine Society. 15: 966-70. PMID 23958296 DOI: 10.1016/j.spinee.2013.06.013 |
0.024 |
|
2006 |
Jansen RC, van Rhijn LW, van Ooij A. Predictable correction of the unfused lumbar lordosis after thoracic correction and fusion in Scheuermann kyphosis. Spine. 31: 1227-31. PMID 16688036 DOI: 10.1097/01.brs.0000217682.53629.ad |
0.019 |
|
2012 |
de Moraes Vieira EB, Garcia JB, da Silva AA, Mualem Araújo RL, Jansen RC. Prevalence, characteristics, and factors associated with chronic pain with and without neuropathic characteristics in São Luís, Brazil. Journal of Pain and Symptom Management. 44: 239-51. PMID 22871508 DOI: 10.1016/j.jpainsymman.2011.08.014 |
0.016 |
|
2013 |
Huitema GC, Jansen RC, Dompeling E, Willems P, Punt I, van Rhijn LW. Pulmonary function after less invasive anterior instrumentation and fusion for idiopathic thoracic scoliosis. Scoliosis. 8: 14. PMID 23965278 DOI: 10.1186/1748-7161-8-14 |
0.011 |
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