Ophelia S. Venturelli, Ph.D.

Affiliations: 
2013 Biochemistry and Molecular Biophysics California Institute of Technology, Pasadena, CA 
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Richard M. Murray grad student 2013 Caltech
 (Role of feedback and dynamics in a gene regulatory network.)
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Connors BM, Thompson J, Ertmer S, et al. (2023) Control points for design of taxonomic composition in synthetic human gut communities. Cell Systems
Ostrem Loss E, Thompson J, Cheung PLK, et al. (2023) Carbohydrate complexity limits microbial growth and reduces the sensitivity of human gut communities to perturbations. Nature Ecology & Evolution. 7: 127-142
Baranwal M, Clark RL, Thompson J, et al. (2022) Recurrent neural networks enable design of multifunctional synthetic human gut microbiome dynamics. Elife. 11
Feng J, Qian Y, Zhou Z, et al. (2022) Polysaccharide utilization loci in Bacteroides determine population fitness and community-level interactions. Cell Host & Microbe
Qian Y, Lan F, Venturelli OS. (2021) Towards a deeper understanding of microbial communities: integrating experimental data with dynamic models. Current Opinion in Microbiology. 62: 84-92
Gupta S, Ross TD, Gomez MM, et al. (2020) Investigating the dynamics of microbial consortia in spatially structured environments. Nature Communications. 11: 2418
Hsu RH, Clark RL, Tan JW, et al. (2019) Microbial Interaction Network Inference in Microfluidic Droplets. Cell Systems
Zengler K, Hofmockel K, Baliga NS, et al. (2019) EcoFABs: advancing microbiome science through standardized fabricated ecosystems. Nature Methods
Cao X, Hamilton JJ, Venturelli OS. (2018) Understanding and Engineering Distributed Biochemical Pathways in Microbial Communities. Biochemistry
Venturelli OS, Carr AC, Fisher G, et al. (2018) Deciphering microbial interactions in synthetic human gut microbiome communities. Molecular Systems Biology. 14: e8157
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