Darren A. Cusanovich, Ph.D.

Affiliations: 
2013 Human Genetics University of Chicago, Chicago, IL 
Area:
Olfaction
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"Darren Cusanovich"
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Parents

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Yoav Gilad grad student 2009-2014 Chicago
 (Integrative genomics approaches to understanding the role of gene regulation in human evolution, disease, and cellular networks: A triptych.)
Jay Shendure post-doc 2014-2018 University of Washington - Seattle/ NIH (GenetiTree)
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Publications

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Cao J, Cusanovich DA, Ramani V, et al. (2018) Joint profiling of chromatin accessibility and gene expression in thousands of single cells. Science (New York, N.Y.)
Pliner HA, Packer JS, McFaline-Figueroa JL, et al. (2018) Cicero Predicts cis-Regulatory DNA Interactions from Single-Cell Chromatin Accessibility Data. Molecular Cell
Cusanovich DA, Hill AJ, Aghamirzaie D, et al. (2018) A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility. Cell
Cusanovich DA, Reddington JP, Garfield DA, et al. (2018) The cis-regulatory dynamics of embryonic development at single-cell resolution. Nature
Cao J, Packer JS, Ramani V, et al. (2017) Comprehensive single-cell transcriptional profiling of a multicellular organism. Science (New York, N.Y.). 357: 661-667
Gasperini M, Findlay GM, McKenna A, et al. (2017) CRISPR/Cas9-Mediated Scanning for Regulatory Elements Required for HPRT1 Expression via Thousands of Large, Programmed Genomic Deletions. American Journal of Human Genetics
Ramani V, Cusanovich DA, Hause RJ, et al. (2016) Mapping 3D genome architecture through in situ DNase Hi-C. Nature Protocols. 11: 2104-2121
Cusanovich DA, Caliskan M, Billstrand C, et al. (2016) Integrated Analyses of Gene Expression and Genetic Association Studies in a Founder Population. Human Molecular Genetics
Davenport ER, Cusanovich DA, Michelini K, et al. (2015) Genome-Wide Association Studies of the Human Gut Microbiota. Plos One. 10: e0140301
Cusanovich DA, Daza R, Adey A, et al. (2015) Epigenetics. Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing. Science (New York, N.Y.). 348: 910-4
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