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Marieke Lydia Kuijjer

Affiliations: 
University of Oslo, Norway, Oslo, Oslo, Norway 
Area:
computational biology
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"Marieke Kuijjer"
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Parents

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Anne-Marie Cleton-Jansen grad student 2008-2013 LUMC
Pancras C W grad student 2008-2013 LUMC
John Quackenbush post-doc 2013-2018 Harvard Chan School of Public Health

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Publications

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Osorio D, Capasso A, Eckhardt SG, et al. (2024) Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcriptomics data. Nature Computational Science
Belova T, Biondi N, Hsieh PH, et al. (2023) Heterogeneity in the gene regulatory landscape of leiomyosarcoma. Nar Cancer. 5: zcad037
Ben Guebila M, Wang T, Lopes-Ramos CM, et al. (2023) The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks. Genome Biology. 24: 45
Ben Guebila M, Weighill D, Lopes-Ramos CM, et al. (2022) An online notebook resource for reproducible inference, analysis and publication of gene regulatory networks. Nature Methods
Guebila MB, Morgan DC, Glass K, et al. (2022) gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit. Nar Genomics and Bioinformatics. 4: lqac002
Ben Guebila M, Lopes-Ramos CM, Weighill D, et al. (2021) GRAND: a database of gene regulatory network models across human conditions. Nucleic Acids Research
Lopes-Ramos CM, Belova T, Brunner TH, et al. (2021) Regulatory network of PD1 signaling is associated with prognosis in glioblastoma multiforme. Cancer Research
Qiang J, Ding W, Kuijjer M, et al. (2020) Clustering Sparse Data With Feature Correlation With Application to Discover Subtypes in Cancer. Ieee Access : Practical Innovations, Open Solutions. 8: 67775-67789
Kuijjer ML, Fagny M, Marin A, et al. (2020) PUMA: PANDA Using MicroRNA Associations. Bioinformatics (Oxford, England)
Lopes-Ramos CM, Chen CY, Kuijjer ML, et al. (2020) Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues. Cell Reports. 31: 107795
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