Jun Ding
Affiliations: | McGill University, Montreal, QC, Canada |
Area:
Machine learning, Computational Biology, Cellular DynamicsGoogle:
"Jun Ding"
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Publications
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| Li D, Ding J, Bar-Joseph Z. (2022) UNIFAN: A Tool for Unsupervised Single-Cell Clustering and Annotation. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Li D, Ding J, Bar-Joseph Z. (2022) Unsupervised cell functional annotation for single-cell RNA-seq. Genome Research |
| Hasanaj E, Wang J, Sarathi A, et al. (2022) Interactive single-cell data analysis using Cellar. Nature Communications. 13: 1998 |
| Li D, Velazquez JJ, Ding J, et al. (2022) TraSig: inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data. Genome Biology. 23: 73 |
| Ding J, Sharon N, Bar-Joseph Z. (2022) Temporal modelling using single-cell transcriptomics. Nature Reviews. Genetics |
| Ding J, Alavi A, Ebrahimkhani MR, et al. (2021) Computational tools for analyzing single-cell data in pluripotent cell differentiation studies. Cell Reports Methods. 1: 100087 |
| Ding J, Lugo-Martinez J, Yuan Y, et al. (2020) Reconstructing SARS-CoV-2 response signaling and regulatory networks. Biorxiv : the Preprint Server For Biology |
| Li D, Ding J, Bar-Joseph Z. (2020) Identifying signaling genes in spatial single cell expression data. Bioinformatics (Oxford, England) |
| Lin C, Ding J, Bar-Joseph Z. (2020) Inferring TF activation order in time series scRNA-Seq studies. Plos Computational Biology. 16: e1007644 |
| Hurley K, Ding J, Villacorta-Martin C, et al. (2020) Reconstructed Single-Cell Fate Trajectories Define Lineage Plasticity Windows during Differentiation of Human PSC-Derived Distal Lung Progenitors. Cell Stem Cell |