| Year |
Citation |
Score |
| 2020 |
Bick AG, Weinstock JS, Nandakumar SK, Fulco CP, Bao EL, Zekavat SM, Szeto MD, Liao X, Leventhal MJ, Nasser J, Chang K, Laurie C, Burugula BB, Gibson CJ, Lin AE, ... ... Scheet P, et al. Inherited causes of clonal haematopoiesis in 97,691 whole genomes. Nature. PMID 33057201 DOI: 10.1038/s41586-020-2819-2 |
0.302 |
|
| 2020 |
Treekitkarnmongkol W, Hassane M, Sinjab A, Chang K, Hara K, Rahal Z, Zhang J, Lu W, Sivakumar S, McDowell TL, Kantrowitz J, Zhou J, Lang W, Xu L, Ochieng JK, ... ... Scheet PA, et al. Augmented Lipocalin-2 is Associated with COPD and Counteracts Lung Adenocarcinoma Development. American Journal of Respiratory and Critical Care Medicine. PMID 32730093 DOI: 10.1164/Rccm.202004-1079Oc |
0.304 |
|
| 2020 |
Hu F, Yu Y, Chen JS, Hu H, Scheet P, Huff CD. Integrated case-control and somatic-germline interaction analyses of soft-tissue sarcoma. Journal of Medical Genetics. PMID 32447321 DOI: 10.1136/Jmedgenet-2019-106814 |
0.3 |
|
| 2019 |
Jakubek YA, Chang K, Sivakumar S, Yu Y, Giordano MR, Fowler J, Huff CD, Kadara H, Vilar E, Scheet P. Large-scale analysis of acquired chromosomal alterations in non-tumor samples from patients with cancer. Nature Biotechnology. PMID 31685958 DOI: 10.1038/S41587-019-0297-6 |
0.345 |
|
| 2019 |
Liu Y, Huang J, Urbanowicz RJ, Chen K, Manduchi E, Greene CS, Moore JH, Scheet P, Chen Y. Embracing study heterogeneity for finding genetic interactions in large-scale research consortia. Genetic Epidemiology. PMID 31583758 DOI: 10.1002/Gepi.22262 |
0.366 |
|
| 2019 |
Hu X, Fujimoto J, Ying L, Fukuoka J, Ashizawa K, Sun W, Reuben A, Chow CW, McGranahan N, Chen R, Hu J, Godoy MC, Tabata K, Kuroda K, Shi L, ... ... Scheet P, et al. Multi-region exome sequencing reveals genomic evolution from preneoplasia to lung adenocarcinoma. Nature Communications. 10: 2978. PMID 31278276 DOI: 10.1038/S41467-019-10877-8 |
0.334 |
|
| 2019 |
Sivakumar S, San Lucas FA, Jakubek YA, McDowell TL, Lang W, Kallsen N, Peyton S, Davies GE, Fukuoka J, Yatabe Y, Zhang J, Futreal PA, Fowler J, Fujimoto J, Ehli EA, ... ... Scheet P, et al. Genomic landscape of allelic imbalance in premalignant atypical adenomatous hyperplasias of the lung. Ebiomedicine. PMID 30905849 DOI: 10.1016/J.Ebiom.2019.03.020 |
0.354 |
|
| 2019 |
Kadara H, Sivakumar S, Jakubek Y, San Lucas FA, Lang W, McDowell T, Weber Z, Behrens C, Davies GE, Kalhor N, Moran C, El-Zein R, Mehran R, Swisher SG, Wang J, ... ... Scheet P, et al. Driver Mutations in Normal Airway Epithelium Elucidate Spatiotemporal Resolution of Lung Cancer. American Journal of Respiratory and Critical Care Medicine. PMID 30896962 DOI: 10.1164/Rccm.201806-1178Oc |
0.312 |
|
| 2019 |
Jakubek YA, Lucas FAS, Scheet P. Directional allelic imbalance profiling and visualization from multi-sample data with RECUR Bioinformatics. 35: 2300-2302. PMID 30462146 DOI: 10.1093/Bioinformatics/Bty885 |
0.419 |
|
| 2019 |
Chang K, Lucas FAS, Ozcan Z, Sivakumar S, Jakubek YA, Fowler RG, Scheet P. Abstract 1660: Identification of allelic imbalance utilizing heterozygous genotype allele frequencies and intensities Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-1660 |
0.312 |
|
| 2019 |
Hassane M, Treekitkarnmongkol W, McDowell TL, Sivakumar S, Lang W, Ochieng JK, Nunomura-Nakamura S, Finnicum C, Davis C, Davies GE, Fukuoka J, Cascone T, McAllister F, Wistuba II, Ehli E, ... ... Scheet P, et al. Abstract 4952: Host lipocalin 2 protects againstKrasmutant lung cancer development by maintaining an anti-tumor immune contexture Cancer Research. 79: 4952-4952. DOI: 10.1158/1538-7445.Am2019-4952 |
0.306 |
|
| 2019 |
Jakubek YA, Lucas FAS, Scheet P. Abstract 2476: RECUR: Algorithm for directional allelic imbalance profiling and visualization from multi-sample data Cancer Research. 79: 2476-2476. DOI: 10.1158/1538-7445.Am2019-2476 |
0.412 |
|
| 2018 |
Adam L, San Lucas FA, Fowler J, Yu Y, Wu W, Liu Y, Wang H, Menter DG, Tetzlaff MT, Ensor JE, Manyam G, Arold ST, Huff CD, Kopetz S, Scheet P, et al. DNA Sequencing of Small Bowel Adenocarcinomas Identifies Targetable Recurrent Mutations in the ERBB2 Signaling Pathway. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30352910 DOI: 10.1158/1078-0432.Ccr-18-1480 |
0.312 |
|
| 2018 |
Liu Y, Weber Z, San Lucas FA, Deshpande A, Jakubek YA, Sulaiman R, Fagerness M, Flier N, Sulaiman J, Davis CM, Fowler J, Starks D, Rojas-Espaillat L, Lazar AJ, Davies GE, ... ... Scheet P, et al. Assessing inter-component heterogeneity of biphasic uterine carcinosarcomas. Gynecologic Oncology. PMID 30194005 DOI: 10.1016/J.Ygyno.2018.08.043 |
0.318 |
|
| 2018 |
Golemis EA, Scheet P, Beck TN, Scolnick E, Hunter DJ, Hawk E, Hopkins N. Molecular mechanisms of the preventable causes of cancer in the United States. Genes & Development. PMID 29945886 DOI: 10.1101/Gad.314849.118 |
0.302 |
|
| 2018 |
Kantrowitz J, Sinjab A, Xu L, McDowell TL, Sivakumar S, Lang W, Nunomura-Nakamura S, Fukuoka J, Nemer G, Darwiche N, Chami H, Tfayli A, Wistuba II, Scheet P, Fujimoto J, et al. Genome-wide gene expression changes in the normal-appearing airway during the evolution of smoking-associated lung adenocarcinoma. Cancer Prevention Research (Philadelphia, Pa.). PMID 29382653 DOI: 10.1158/1940-6207.Capr-17-0295 |
0.316 |
|
| 2018 |
Yu Y, Hu H, Chen JS, Hu F, Fowler J, Scheet P, Zhao H, Huff CD. Integrated case-control and somatic-germline interaction analyses of melanoma susceptibility genes. Biochimica Et Biophysica Acta. PMID 29317335 DOI: 10.1016/J.Bbadis.2018.01.007 |
0.367 |
|
| 2018 |
Deshpande A, Lang W, McDowell T, Sivakumar S, Zhang J, Wang J, San Lucas FA, Fowler J, Kadara H, Scheet P. Strategies for identification of somatic variants using the Ion Torrent deep targeted sequencing platform. Bmc Bioinformatics. 19: 5. PMID 29301485 DOI: 10.1186/S12859-017-1991-3 |
0.341 |
|
| 2018 |
Hu X, Fujimoto J, Chen R, Chow C, Sun W, Song X, Mao X, Scheet P, Kadara H, Behrens C, Wu C, Lee JJ, Antonoff M, Vaporciyan AA, Swisher S, et al. Genomic evolutions in the progression from lung preneoplasia to adenocarcinoma. Journal of Clinical Oncology. 36: 8576-8576. DOI: 10.1200/Jco.2018.36.15_Suppl.8576 |
0.335 |
|
| 2018 |
Chen R, Fujimoto J, Reuben A, Ying L, Hu X, Chow C, Canales JR, Sun W, Hu J, Cuentas ERP, Behrens C, Wu C, Little L, Gumbs C, Wiesnoski D, ... ... Scheet P, et al. Abstract 4686: T cell repertoire evolution from the normal lung to invasive lung adenocarcinoma Immunology. 78: 4686-4686. DOI: 10.1158/1538-7445.Am2018-4686 |
0.312 |
|
| 2018 |
Sivakumar S, Jakubek Y, Lucas FAS, Lang W, McDowell C, Weber Z, Behrens C, Kalhor N, Moran C, El-Zein R, Davies G, Fujimoto J, Mehran R, Swisher SG, Wang J, ... ... Scheet P, et al. Abstract 3997: Somatic mutational processes in the cancerization field of the normal-appearing airway reveal early drivers in the development of non-small cell lung cancer Tumor Biology. DOI: 10.1158/1538-7445.Am2018-3997 |
0.315 |
|
| 2018 |
Lucas FAS, Lupo P, Brown A, Scheurer M, Scheet P. Abstract 2085: Exploring mutation signatures in pediatric cancers Cancer Research. 78: 2085-2085. DOI: 10.1158/1538-7445.Am2018-2085 |
0.314 |
|
| 2017 |
Yu Y, Hu H, Bohlender RJ, Hu F, Chen JS, Holt C, Fowler J, Guthery SL, Scheet P, Hildebrandt MA, Yandell M, Huff CD. XPAT: a toolkit to conduct cross-platform association studies with heterogeneous sequencing datasets. Nucleic Acids Research. PMID 29294048 DOI: 10.1093/Nar/Gkx1280 |
0.38 |
|
| 2017 |
Huang J, Liu Y, Vitale S, Penning TM, Whitehead AS, Blair IA, Vachani A, Clapper ML, Muscat JE, Lazarus P, Scheet P, Moore JH, Chen Y. On meta- and mega-analyses for gene-environment interactions. Genetic Epidemiology. PMID 29110346 DOI: 10.1002/Gepi.22085 |
0.339 |
|
| 2017 |
Khalil AA, Sivakumar S, Lucas FAS, McDowell T, Lang W, Tabata K, Fujimoto J, Yatabe Y, Spira A, Scheet P, Nemer G, Kadara H. TBX2 subfamily suppression in lung cancer pathogenesis: a high-potential marker for early detection. Oncotarget. 8: 68230-68241. PMID 28978111 DOI: 10.18632/Oncotarget.19938 |
0.303 |
|
| 2017 |
Sivakumar S, San Lucas FA, McDowell TL, Lang W, Xu L, Fujimoto J, Zhang J, Futreal PA, Fukuoka J, Yatabe Y, Dubinett SM, Spira AE, Fowler J, Hawk ET, Wistuba II, ... Scheet P, et al. Genomic landscape of atypical adenomatous hyperplasia reveals divergent modes to lung adenocarcinoma. Cancer Research. PMID 28951454 DOI: 10.1158/0008-5472.Can-17-1605 |
0.359 |
|
| 2017 |
Fujimoto J, Nunomura-Nakamura S, Liu Y, Lang W, McDowell T, Jakubek Y, Ezzeddine D, Ochieng JK, Petersen J, Davies G, Fukuoka J, Wistuba II, Ehli E, Fowler J, Scheet P, et al. Development of Kras mutant lung adenocarcinoma in mice with knockout of the airway lineage-specific gene Gprc5a. International Journal of Cancer. PMID 28653505 DOI: 10.1002/Ijc.30851 |
0.356 |
|
| 2017 |
Gausachs M, Borras E, Chang K, González S, Azuara D, Delgado Amador A, Lopez-Doriga A, San Lucas FA, Sanjuan X, Paules MJ, Taggart M, Davies G, Ehli EA, Fowler J, Moreno V, ... ... Scheet P, et al. Mutational Heterogeneity in APC and KRAS Arises at the Crypt level and Leads to Polyclonality in Early Colorectal Tumorigenesis. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 28645942 DOI: 10.1158/1078-0432.Ccr-17-0821 |
0.35 |
|
| 2017 |
Böger CA, Gorski M, McMahon GM, Xu H, Chang YC, van der Most PJ, Navis G, Nolte IM, de Borst MH, Zhang W, Lehne B, Loh M, Tan ST, Boerwinkle E, Grams ME, ... ... Scheet P, et al. NFAT5 and SLC4A10 Loci Associate with Plasma Osmolality. Journal of the American Society of Nephrology : Jasn. PMID 28360221 DOI: 10.1681/Asn.2016080892 |
0.368 |
|
| 2017 |
Adam L, Fowler J, Wu W, Yu Y, Wang H, Lucas FAS, Huff C, Kopetz S, Scheet P, Overman MJ. DNA sequencing of the small bowel adenocarcinomas to identify targetable ErbB2 mutations. Journal of Clinical Oncology. 35. DOI: 10.1200/Jco.2017.35.15_Suppl.E15800 |
0.333 |
|
| 2017 |
Fowler J, Lucas FAS, Sivakumar S, Deshpande A, Kadara H, Scheet PA. Abstract 2594: Optimizing the replication of cancer genomics workflows: case studies Cancer Research. 77: 2594-2594. DOI: 10.1158/1538-7445.Am2017-2594 |
0.312 |
|
| 2017 |
Liu Y, Weber Z, Lucas FAS, Deshpande A, Sulaiman R, Fagerness M, Flier N, Sulaiman J, Davis CM, Fowler J, Davies GE, Starks D, Rojas-Espaillat L, Scheet P, Ehli EA. Abstract 2463: Tumor profiling of separated carcinomatous and sarcomatous components from uterine carcinosarcoma biopsies provides insights into their development Cancer Research. 77: 2463-2463. DOI: 10.1158/1538-7445.Am2017-2463 |
0.379 |
|
| 2017 |
Sivakumar S, Jakubek Y, Lang W, McDowell T, Garcia MM, Chow C, Weber Z, Behrens C, Kalhor N, Moran C, El-Zein R, Davies G, Fujimoto J, Mehran R, Swisher SG, ... ... Scheet P, et al. Abstract 1434: Mutational landscape in the normal-appearing airway cancerization field of early-stage non-small cell lung cancer Cancer Research. 77: 1434-1434. DOI: 10.1158/1538-7445.Am2017-1434 |
0.308 |
|
| 2017 |
Sivakumar S, San Lucas F, McDowell T, Lang W, Xu L, Fujimoto J, Zhang J, Wistuba I, Futreal F, Fukuoka J, Yatabe Y, Dubinett S, Spira A, Fowler J, Hawk E, ... Scheet P, et al. Genomic Landscape of Atypical Adenomatous Hyperplasia and Their Progression to Lung Adenocarcinomas Journal of Thoracic Oncology. 12: S1546. DOI: 10.1016/J.Jtho.2017.06.061 |
0.312 |
|
| 2016 |
Chen M, Rothman N, Ye Y, Gu J, Scheet PA, Huang M, Chang DW, Dinney CP, Silverman DT, Figueroa JD, Chanock SJ, Wu X. Pathway analysis of bladder cancer genome-wide association study identifies novel pathways involved in bladder cancer development. Genes & Cancer. 7: 229-239. PMID 27738493 DOI: 10.18632/Genesandcancer.113 |
0.409 |
|
| 2016 |
Liu Y, Chen Y, Scheet P. A meta-analytic framework for detection of genetic interactions. Genetic Epidemiology. PMID 27528046 DOI: 10.1002/Gepi.21996 |
0.346 |
|
| 2016 |
Lucas FAS, Sivakumar S, Vattathil S, Fowler J, Vilar EV, Scheet P. Rapid and powerful detection of subtle allelic imbalance from exome sequencing data with hapLOHseq Bioinformatics. 32: 3015-3017. PMID 27288500 DOI: 10.1093/Bioinformatics/Btw340 |
0.397 |
|
| 2016 |
Borras E, San Lucas FA, Chang K, Zhou R, Masand G, Fowler J, Mork ME, You YN, Taggart MW, McAllister F, Jones DA, Davies GE, Edelmann W, Ehli EA, Lynch PM, ... ... Scheet P, et al. Genomic Landscape of Colorectal Mucosa and Adenomas. Cancer Prevention Research (Philadelphia, Pa.). PMID 27221540 DOI: 10.1158/1940-6207.Capr-16-0081 |
0.397 |
|
| 2016 |
Jakubek Y, Lang W, Vattathil S, Garcia M, Xu L, Huang L, Yoo SY, Shen L, Lu W, Chow CW, Weber Z, Davies G, Huang J, Behrens C, Kalhor N, ... ... Scheet P, et al. Genomic landscape established by allelic imbalance in the cancerization field of a normal appearing airway. Cancer Research. PMID 27216194 DOI: 10.1158/0008-5472.Can-15-3064 |
0.37 |
|
| 2016 |
Kadara H, Scheet P, Wistuba II, Spira AE. Early events in the molecular pathogenesis of lung cancer. Cancer Prevention Research (Philadelphia, Pa.). PMID 27006378 DOI: 10.1158/1940-6207.Capr-15-0400 |
0.327 |
|
| 2016 |
Vattathil S, Scheet P. Extensive Hidden Genomic Mosaicism Revealed in Normal Tissue. American Journal of Human Genetics. 98: 571-578. PMID 26942289 DOI: 10.1016/J.Ajhg.2016.02.003 |
0.361 |
|
| 2016 |
Fujimoto J, Nunomura S, Lang W, Liu Y, Wei J, Ochieng J, Jakubek Y, Ostrin E, Petersen J, Davies G, Darwiche N, Ehli E, Fowler J, Scheet P, Kadara H. Abstract 4056: Development of Kras mutant lung adenocarcinoma in tobacco carcinogen exposed mice with knockout of the airway lineage-specific G-protein coupled receptor Gprc5a Cancer Research. 76: 4056-4056. DOI: 10.1158/1538-7445.Am2016-4056 |
0.355 |
|
| 2016 |
Deshpande AS, Weber Z, Sulaiman R, Flier N, Ageton C, Fagerness M, Sulaiman J, Davies GE, Starks D, Rojas-Espaillat L, Scheet PA, Ehli E. Abstract 131: Allelic imbalance analysis of uterine carcinosarcoma: An inquiry into the dual nature of the neoplasm Cancer Research. 76: 131-131. DOI: 10.1158/1538-7445.Am2016-131 |
0.346 |
|
| 2015 |
Karol SE, Mattano LA, Yang W, Maloney KW, Smith C, Liu C, Ramsey LB, Fernandez CA, Chang TY, Neale G, Cheng C, Mardis E, Fulton R, Scheet P, San Lucas FA, et al. Genetic risk factors for the development of osteonecrosis in children under age 10 treated for acute lymphoblastic leukemia. Blood. PMID 26590194 DOI: 10.1182/Blood-2015-10-673848 |
0.364 |
|
| 2015 |
Miller FW, Chen W, O'Hanlon TP, Cooper RG, Vencovsky J, Rider LG, Danko K, Wedderburn LR, Lundberg IE, Pachman LM, Reed AM, Ytterberg SR, Padyukov L, Selva-O'Callaghan A, Radstake TR, ... ... Scheet P, et al. Genome-wide association study identifies HLA 8.1 ancestral haplotype alleles as major genetic risk factors for myositis phenotypes. Genes and Immunity. PMID 26291516 DOI: 10.1038/Gene.2015.28 |
0.401 |
|
| 2015 |
Karol SE, Yang W, Van Driest SL, Chang TY, Kaste S, Bowton E, Basford M, Bastarache L, Roden DM, Denny JC, Larsen E, Winick N, Carroll WL, Cheng C, Pei D, ... ... Scheet P, et al. Genetics of glucocorticoid-associated osteonecrosis in children with acute lymphoblastic leukemia. Blood. PMID 26265699 DOI: 10.1182/Blood-2015-05-643601 |
0.372 |
|
| 2015 |
Pappa I, St Pourcain B, Benke K, Cavadino A, Hakulinen C, Nivard MG, Nolte IM, Tiesler CM, Bakermans-Kranenburg MJ, Davies GE, Evans DM, Geoffroy MC, Grallert H, Groen-Blokhuis MM, Hudziak JJ, ... ... Scheet PA, et al. A genome-wide approach to children's aggressive behavior: The EAGLE consortium. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 26087016 DOI: 10.1002/Ajmg.B.32333 |
0.382 |
|
| 2015 |
Frani? S, Groen-Blokhuis MM, Dolan CV, Kattenberg MV, Pool R, Xiao X, Scheet PA, Ehli EA, Davies GE, van der Sluis S, Abdellaoui A, Hansell NK, Martin NG, Hudziak JJ, van Beijsterveldt CE, et al. Intelligence: shared genetic basis between Mendelian disorders and a polygenic trait. European Journal of Human Genetics : Ejhg. PMID 25712083 DOI: 10.1038/Ejhg.2015.3 |
0.333 |
|
| 2015 |
Borras E, Lucas AS, Chang K, Bhatia G, Wu H, Fowler J, You YN, Lynch PM, Taggart MW, Hawk ET, Capella G, Scheet P, Vilar E. Abstract 4806: Characterizing the genomic landscape of premalignant colorectal polyps using next-generation sequencing Cancer Research. 75: 4806-4806. DOI: 10.1158/1538-7445.Am2015-4806 |
0.389 |
|
| 2015 |
Chang K, Borras E, Lucas AS, Fowler J, Hawk ET, Capella G, Scheet P, Vilar E. Abstract 1087: Genomic analysis reveals evidence of clonality in premalignant colonic polyps Cancer Research. 75: 1087-1087. DOI: 10.1158/1538-7445.Am2015-1087 |
0.383 |
|
| 2014 |
Romero Arenas MA, Fowler RG, San Lucas FA, Shen J, Rich TA, Grubbs EG, Lee JE, Scheet P, Perrier ND, Zhao H. Preliminary whole-exome sequencing reveals mutations that imply common tumorigenicity pathways in multiple endocrine neoplasia type 1 patients. Surgery. 156: 1351-7; discussion 1. PMID 25456907 DOI: 10.1016/J.Surg.2014.08.073 |
0.306 |
|
| 2014 |
San Lucas FA, Fowler J, Chang K, Kopetz S, Vilar E, Scheet P. Cancer in silico drug discovery: a systems biology tool for identifying candidate drugs to target specific molecular tumor subtypes. Molecular Cancer Therapeutics. 13: 3230-40. PMID 25349306 DOI: 10.1158/1535-7163.Mct-14-0260 |
0.313 |
|
| 2014 |
Xia R, Vattathil S, Scheet P. Identification of allelic imbalance with a statistical model for subtle genomic mosaicism. Plos Computational Biology. 10: e1003765. PMID 25166618 DOI: 10.1371/Journal.Pcbi.1003765 |
0.37 |
|
| 2014 |
Wang Y, Waters J, Leung ML, Unruh A, Roh W, Shi X, Chen K, Scheet P, Vattathil S, Liang H, Multani A, Zhang H, Zhao R, Michor F, Meric-Bernstam F, et al. Clonal evolution in breast cancer revealed by single nucleus genome sequencing. Nature. 512: 155-60. PMID 25079324 DOI: 10.1038/Nature13600 |
0.346 |
|
| 2014 |
Fernandez CA, Smith C, Yang W, Daté M, Bashford D, Larsen E, Bowman WP, Liu C, Ramsey LB, Chang T, Turner V, Loh ML, Raetz EA, Winick NJ, Hunger SP, ... ... Scheet P, et al. HLA-DRB1*07:01 is associated with a higher risk of asparaginase allergies. Blood. 124: 1266-76. PMID 24970932 DOI: 10.1182/Blood-2014-03-563742 |
0.308 |
|
| 2014 |
Benke KS, Nivard MG, Velders FP, Walters RK, Pappa I, Scheet PA, Xiao X, Ehli EA, Palmer LJ, Whitehouse AJ, Verhulst FC, Jaddoe VW, Rivadeneira F, Groen-Blokhuis MM, van Beijsterveldt CE, et al. A genome-wide association meta-analysis of preschool internalizing problems. Journal of the American Academy of Child and Adolescent Psychiatry. 53: 667-676.e7. PMID 24839885 DOI: 10.1016/J.Jaac.2013.12.028 |
0.382 |
|
| 2014 |
Haricharan S, Bainbridge MN, Scheet P, Brown PH. Somatic mutation load of estrogen receptor-positive breast tumors predicts overall survival: an analysis of genome sequence data. Breast Cancer Research and Treatment. 146: 211-20. PMID 24839032 DOI: 10.1007/S10549-014-2991-X |
0.346 |
|
| 2014 |
Hu H, Roach JC, Coon H, Guthery SL, Voelkerding KV, Margraf RL, Durtschi JD, Tavtigian SV, Shankaracharya, Wu W, Scheet P, Wang S, Xing J, Glusman G, Hubley R, et al. A unified test of linkage analysis and rare-variant association for analysis of pedigree sequence data. Nature Biotechnology. 32: 663-9. PMID 24837662 DOI: 10.1038/Nbt.2895 |
0.401 |
|
| 2014 |
Huppertz C, Bartels M, Groen-Blokhuis MM, Dolan CV, de Moor MH, Abdellaoui A, van Beijsterveldt CE, Ehli EA, Hottenga JJ, Willemsen G, Xiao X, Scheet P, Davies GE, Boomsma DI, Hudziak JJ, et al. The dopaminergic reward system and leisure time exercise behavior: a candidate allele study. Biomed Research International. 2014: 591717. PMID 24734235 DOI: 10.1155/2014/591717 |
0.321 |
|
| 2014 |
Zhou X, Wang J, Zou H, Ward MM, Weisman MH, Espitia MG, Xiao X, Petersdorf E, Mignot E, Martin J, Gensler LS, Scheet P, Reveille JD. MICA, a gene contributing strong susceptibility to ankylosing spondylitis. Annals of the Rheumatic Diseases. 73: 1552-7. PMID 23727634 DOI: 10.1136/Annrheumdis-2013-203352 |
0.352 |
|
| 2014 |
Chang T, Yang W, Sara VDL, Kaste SC, Bowten EA, Basford M, Bastarache L, Roden DM, Denny JC, Mattano LA, Larsen EC, Winick NJ, Carroll WL, Cheng C, Pei D, ... ... Scheet P, et al. Glutamate Receptor Polymorphisms Contribute to Glucocorticoid-Associated Osteonecrosis Blood. 124: 367-367. DOI: 10.1182/Blood.V124.21.367.367 |
0.391 |
|
| 2014 |
Wang Y, Navin N, Waters J, Leung M, Unruh A, Shi X, Roh W, Chen K, Scheet P, Vattathil S, Liang H, Multani A, Zhang H, Meric-Bernstam F, Michor F, et al. Abstract LB-310: Single cell genome sequencing reveals clonal stability and diversity in breast cancer Cancer Research. 74. DOI: 10.1158/1538-7445.Am2014-Lb-310 |
0.37 |
|
| 2014 |
Lucas FAS, Fowler J, Kopetz S, Vilar E, Scheet P. Abstract 5371: Drug repositioning with a bioinformatics platform that integrates the TCGA, cMap and CCLE Cancer Research. 74: 5371-5371. DOI: 10.1158/1538-7445.Am2014-5371 |
0.303 |
|
| 2014 |
Scheet P, Xia R, Lucas FAS, Hahn C, Fowler J, Vattathil S. Abstract 5320: Novel computational methods reveal subtle clonal mosaicism Cancer Research. 74: 5320-5320. DOI: 10.1158/1538-7445.Am2014-5320 |
0.39 |
|
| 2013 |
Abdellaoui A, Hottenga JJ, Xiao X, Scheet P, Ehli EA, Davies GE, Hudziak JJ, Smit DJ, Bartels M, Willemsen G, Brooks A, Sullivan PF, Smit JH, de Geus EJ, Penninx BW, et al. Association between autozygosity and major depression: stratification due to religious assortment. Behavior Genetics. 43: 455-67. PMID 23978897 DOI: 10.1007/S10519-013-9610-1 |
0.321 |
|
| 2013 |
Graff M, Ngwa JS, Workalemahu T, Homuth G, Schipf S, Teumer A, Völzke H, Wallaschofski H, Abecasis GR, Edward L, Francesco C, Sanna S, Scheet P, Schlessinger D, Sidore C, et al. Genome-wide analysis of BMI in adolescents and young adults reveals additional insight into the effects of genetic loci over the life course. Human Molecular Genetics. 22: 3597-607. PMID 23669352 DOI: 10.1093/Hmg/Ddt205 |
0.318 |
|
| 2013 |
van der Loos MJ, Rietveld CA, Eklund N, Koellinger PD, Rivadeneira F, Abecasis GR, Ankra-Badu GA, Baumeister SE, Benjamin DJ, Biffar R, Blankenberg S, Boomsma DI, Cesarini D, Cucca F, de Geus EJ, ... ... Scheet P, et al. The molecular genetic architecture of self-employment. Plos One. 8: e60542. PMID 23593239 DOI: 10.1371/Journal.Pone.0060542 |
0.382 |
|
| 2013 |
Abdellaoui A, Hottenga JJ, de Knijff P, Nivard MG, Xiao X, Scheet P, Brooks A, Ehli EA, Hu Y, Davies GE, Hudziak JJ, Sullivan PF, van Beijsterveldt T, Willemsen G, de Geus EJ, et al. Population structure, migration, and diversifying selection in the Netherlands. European Journal of Human Genetics : Ejhg. 21: 1277-85. PMID 23531865 DOI: 10.1038/Ejhg.2013.48 |
0.35 |
|
| 2013 |
Xu H, Yang W, Perez-Andreu V, Devidas M, Fan Y, Cheng C, Pei D, Scheet P, Burchard EG, Eng C, Huntsman S, Torgerson DG, Dean M, Winick NJ, Martin PL, et al. Novel susceptibility variants at 10p12.31-12.2 for childhood acute lymphoblastic leukemia in ethnically diverse populations. Journal of the National Cancer Institute. 105: 733-42. PMID 23512250 DOI: 10.1093/Jnci/Djt042 |
0.339 |
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| 2013 |
Vattathil S, Scheet P. Haplotype-based profiling of subtle allelic imbalance with SNP arrays Genome Research. 23: 152-158. PMID 23028187 DOI: 10.1101/Gr.141374.112 |
0.401 |
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| 2013 |
Lucas FAS, Kopetz S, Scheet PA, Sanchez EV. Discovering new targeted therapies for BRAF mutant-like colorectal cancers. Journal of Clinical Oncology. 31: 3623-3623. DOI: 10.1200/Jco.2013.31.15_Suppl.3623 |
0.309 |
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| 2013 |
Fernandez CA, Relling MV, Smith C, Yang W, Larsen EC, Bowman WP, Liu C, Ramsey LB, Chang T, Turner V, Loh ML, Raetz EA, Winick NJ, Hunger SP, Carroll WL, ... ... Scheet P, et al. HLA-DRB1*07:01 Is Associated With Asparaginase Allergies In Children With Acute Lymphoblastic Leukemia Blood. 122: 60-60. DOI: 10.1182/Blood.V122.21.60.60 |
0.327 |
|
| 2012 |
Scheet P, Ehli EA, Xiao X, van Beijsterveldt CE, Abdellaoui A, Althoff RR, Hottenga JJ, Willemsen G, Nelson KA, Huizenga PE, Hu Y, Amos CI, Bartels M, Groen-Blokhuis MM, de Geus EJ, et al. Twins, tissue, and time: an assessment of SNPs and CNVs. Twin Research and Human Genetics : the Official Journal of the International Society For Twin Studies. 15: 737-45. PMID 23021707 DOI: 10.1017/Thg.2012.61 |
0.331 |
|
| 2012 |
Yang JJ, Cheng C, Devidas M, Cao X, Campana D, Yang W, Fan Y, Neale G, Cox N, Scheet P, Borowitz MJ, Winick NJ, Martin PL, Bowman WP, Camitta B, et al. Genome-wide association study identifies germline polymorphisms associated with relapse of childhood acute lymphoblastic leukemia. Blood. 120: 4197-204. PMID 23007406 DOI: 10.1182/Blood-2012-07-440107 |
0.398 |
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| 2012 |
Hartz SM, Short SE, Saccone NL, Culverhouse R, Chen L, Schwantes-An TH, Coon H, Han Y, Stephens SH, Sun J, Chen X, Ducci F, Dueker N, Franceschini N, Frank J, ... ... Scheet P, et al. Increased genetic vulnerability to smoking at CHRNA5 in early-onset smokers. Archives of General Psychiatry. 69: 854-60. PMID 22868939 DOI: 10.1001/Archgenpsychiatry.2012.124 |
0.303 |
|
| 2012 |
Ehli EA, Abdellaoui A, Hu Y, Hottenga JJ, Kattenberg M, van Beijsterveldt T, Bartels M, Althoff RR, Xiao X, Scheet P, de Geus EJ, Hudziak JJ, Boomsma DI, Davies GE. De novo and inherited CNVs in MZ twin pairs selected for discordance and concordance on Attention Problems. European Journal of Human Genetics : Ejhg. 20: 1037-43. PMID 22490988 DOI: 10.1038/Ejhg.2012.49 |
0.364 |
|
| 2012 |
Dastani Z, Hivert MF, Timpson N, Perry JR, Yuan X, Scott RA, Henneman P, Heid IM, Kizer JR, Lyytikäinen LP, Fuchsberger C, Tanaka T, Morris AP, Small K, Isaacs A, ... ... Scheet P, et al. Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals. Plos Genetics. 8: e1002607. PMID 22479202 DOI: 10.1371/Journal.Pgen.1002607 |
0.333 |
|
| 2012 |
Naitza S, Porcu E, Steri M, Taub DD, Mulas A, Xiao X, Strait J, Dei M, Lai S, Busonero F, Maschio A, Usala G, Zoledziewska M, Sidore C, Zara I, ... ... Scheet P, et al. A genome-wide association scan on the levels of markers of inflammation in Sardinians reveals associations that underpin its complex regulation. Plos Genetics. 8: e1002480. PMID 22291609 DOI: 10.1371/Journal.Pgen.1002480 |
0.368 |
|
| 2012 |
Xu H, Cheng C, Devidas M, Pei D, Fan Y, Yang W, Neale G, Scheet P, Burchard EG, Torgerson DG, Eng C, Dean M, Antillon F, Winick NJ, Martin PL, et al. ARID5B genetic polymorphisms contribute to racial disparities in the incidence and treatment outcome of childhood acute lymphoblastic leukemia. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 30: 751-7. PMID 22291082 DOI: 10.1200/Jco.2011.38.0345 |
0.377 |
|
| 2012 |
Palmer ND, McDonough CW, Hicks PJ, Roh BH, Wing MR, An SS, Hester JM, Cooke JN, Bostrom MA, Rudock ME, Talbert ME, Lewis JP, Ferrara A, ... ... Scheet P, et al. A genome-wide association search for type 2 diabetes genes in African Americans. Plos One. 7: e29202. PMID 22238593 DOI: 10.1371/Journal.Pone.0029202 |
0.406 |
|
| 2012 |
San Lucas FA, Rosenberg NA, Scheet P. Haploscope: a tool for the graphical display of haplotype structure in populations. Genetic Epidemiology. 36: 17-21. PMID 22147662 DOI: 10.1002/Gepi.20640 |
0.327 |
|
| 2012 |
Ramsey LB, Bruun GH, Yang W, Treviño LR, Vattathil S, Scheet P, Cheng C, Rosner GL, Giacomini KM, Fan Y, Sparreboom A, Mikkelsen TS, Corydon TJ, Pui CH, Evans WE, et al. Rare versus common variants in pharmacogenetics: SLCO1B1 variation and methotrexate disposition. Genome Research. 22: 1-8. PMID 22147369 DOI: 10.1101/Gr.129668.111 |
0.421 |
|
| 2012 |
San Lucas FA, Wang G, Scheet P, Peng B. Integrated annotation and analysis of genetic variants from next-generation sequencing studies with variant tools. Bioinformatics (Oxford, England). 28: 421-2. PMID 22138362 DOI: 10.1093/Bioinformatics/Btr667 |
0.592 |
|
| 2012 |
Yang JJ, Xu H, Yang W, Perez-Andreu V, Devidas M, Fan Y, Cheng C, Pei D, Scheet P, Burchard EG, Eng C, Huntsman S, Torgerson DG, Dean M, Winick N, et al. Genome-Wide Association Study Identifies a Novel Susceptibility Locus At 10p12.31-12.2 for Childhood Acute Lymphoblastic Leukemia in Ethinically Diverse Populations Blood. 120: 877-877. DOI: 10.1182/Blood.V120.21.877.877 |
0.426 |
|
| 2011 |
Dehghan A, Dupuis J, Barbalic M, Bis JC, Eiriksdottir G, Lu C, Pellikka N, Wallaschofski H, Kettunen J, Henneman P, Baumert J, Strachan DP, Fuchsberger C, Vitart V, Wilson JF, ... ... Scheet P, et al. Meta-analysis of genome-wide association studies in >80 000 subjects identifies multiple loci for C-reactive protein levels. Circulation. 123: 731-8. PMID 21300955 DOI: 10.1161/Circulationaha.110.948570 |
0.402 |
|
| 2011 |
Yang JJ, Cheng C, Devidas M, Cao X, Fan Y, Campana D, Yang W, Neale G, Cox NJ, Scheet P, Borowitz MJ, Winick NJ, Martin PL, Willman CL, Bowman WP, et al. Ancestry and pharmacogenomics of relapse in acute lymphoblastic leukemia. Nature Genetics. 43: 237-41. PMID 21297632 DOI: 10.1038/Ng.763 |
0.352 |
|
| 2011 |
Zheng J, Li Y, Abecasis GR, Scheet P. A comparison of approaches to account for uncertainty in analysis of imputed genotypes. Genetic Epidemiology. 35: 102-10. PMID 21254217 DOI: 10.1002/Gepi.20552 |
0.415 |
|
| 2011 |
Ramsey LB, Bruun GH, Yang W, Trevino LR, Vattathil S, Scheet P, Cheng C, Rosner G, Giacomini K, Fan Y, Sparreboom A, Mikkelsen T, Corydon TJ, Pui C, Evans WE, et al. SLCO1B1 Variation and Methotrexate Disposition in Children with Acute Lymphoblastic Leukemia: The Importance of Rare Variants in Pharmacogenetics Blood. 118: 571-571. DOI: 10.1182/Blood.V118.21.571.571 |
0.394 |
|
| 2010 |
Li Y, Willer CJ, Ding J, Scheet P, Abecasis GR. MaCH: Using sequence and genotype data to estimate haplotypes and unobserved genotypes Genetic Epidemiology. 34: 816-834. PMID 21058334 DOI: 10.1002/Gepi.20533 |
0.432 |
|
| 2010 |
Amos CI, Gorlov IP, Dong Q, Wu X, Zhang H, Lu EY, Scheet P, Greisinger AJ, Mills GB, Spitz MR. Nicotinic acetylcholine receptor region on chromosome 15q25 and lung cancer risk among African Americans: a case-control study. Journal of the National Cancer Institute. 102: 1199-205. PMID 20554942 DOI: 10.1093/Jnci/Djq232 |
0.387 |
|
| 2010 |
Liu JZ, Tozzi F, Waterworth DM, Pillai SG, Muglia P, Middleton L, Berrettini W, Knouff CW, Yuan X, Waeber G, Vollenweider P, Preisig M, Wareham NJ, Zhao JH, Loos RJ, ... ... Scheet P, et al. Meta-analysis and imputation refines the association of 15q25 with smoking quantity. Nature Genetics. 42: 436-40. PMID 20418889 DOI: 10.1038/Ng.572 |
0.365 |
|
| 2009 |
Lindgren CM, Heid IM, Randall JC, Lamina C, Steinthorsdottir V, Qi L, Speliotes EK, Thorleifsson G, Willer CJ, Herrera BM, Jackson AU, Lim N, Scheet P, Soranzo N, Amin N, et al. Genome-wide association scan meta-analysis identifies three Loci influencing adiposity and fat distribution. Plos Genetics. 5: e1000508. PMID 19557161 DOI: 10.1371/Journal.Pgen.1000508 |
0.331 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. STrengthening the REporting of Genetic Association studies (STREGA)--an extension of the STROBE statement. European Journal of Clinical Investigation. 39: 247-66. PMID 19297801 DOI: 10.1111/J.1365-2362.2009.02125.X |
0.392 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. STrengthening the REporting of Genetic Association Studies (STREGA)--an extension of the STROBE statement. Genetic Epidemiology. 33: 581-98. PMID 19278015 DOI: 10.1002/Gepi.20410 |
0.392 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. Strengthening the reporting of genetic association studies (STREGA): an extension of the strengthening the reporting of observational studies in epidemiology (STROBE) statement. Journal of Clinical Epidemiology. 62: 597-608.e4. PMID 19217256 DOI: 10.1016/J.Jclinepi.2008.12.004 |
0.39 |
|
| 2009 |
Huang L, Li Y, Singleton AB, Hardy JA, Abecasis G, Rosenberg NA, Scheet P. Genotype-imputation accuracy across worldwide human populations. American Journal of Human Genetics. 84: 235-50. PMID 19215730 DOI: 10.1016/J.Ajhg.2009.01.013 |
0.377 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. STrengthening the REporting of Genetic Association Studies (STREGA): an extension of the STROBE statement. Plos Medicine. 6: e22. PMID 19192942 DOI: 10.1371/Journal.Pmed.1000022 |
0.392 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. Strengthening the reporting of genetic association studies (STREGA): an extension of the STROBE statement. European Journal of Epidemiology. 24: 37-55. PMID 19189221 DOI: 10.1007/S10654-008-9302-Y |
0.392 |
|
| 2009 |
Little J, Higgins JP, Ioannidis JP, Moher D, Gagnon F, von Elm E, Khoury MJ, Cohen B, Davey-Smith G, Grimshaw J, Scheet P, Gwinn M, Williamson RE, Zou GY, Hutchings K, et al. Strengthening the reporting of genetic association studies (STREGA): an extension of the STROBE Statement. Human Genetics. 125: 131-51. PMID 19184668 DOI: 10.1007/S00439-008-0592-7 |
0.392 |
|
| 2009 |
Willer CJ, Speliotes EK, Loos RJ, Li S, Lindgren CM, Heid IM, Berndt SI, Elliott AL, Jackson AU, Lamina C, Lettre G, Lim N, Lyon HN, McCarroll SA, Papadakis K, ... ... Scheet P, et al. Six new loci associated with body mass index highlight a neuronal influence on body weight regulation. Nature Genetics. 41: 25-34. PMID 19079261 DOI: 10.1038/Ng.287 |
0.328 |
|
| 2009 |
Prokopenko I, Langenberg C, Florez JC, Saxena R, Soranzo N, Thorleifsson G, Loos RJ, Manning AK, Jackson AU, Aulchenko Y, Potter SC, Erdos MR, Sanna S, Hottenga JJ, Wheeler E, ... ... Scheet P, et al. Variants in MTNR1B influence fasting glucose levels. Nature Genetics. 41: 77-81. PMID 19060907 DOI: 10.1038/Ng.290 |
0.356 |
|
| 2009 |
Kathiresan S, Willer CJ, Peloso GM, Demissie S, Musunuru K, Schadt EE, Kaplan L, Bennett D, Li Y, Tanaka T, Voight BF, Bonnycastle LL, Jackson AU, Crawford G, Surti A, ... ... Scheet P, et al. Common variants at 30 loci contribute to polygenic dyslipidemia. Nature Genetics. 41: 56-65. PMID 19060906 DOI: 10.1038/Ng.291 |
0.302 |
|
| 2008 |
Scheet P, Stephens M. Linkage disequilibrium-based quality control for large-scale genetic studies. Plos Genetics. 4: e1000147. PMID 18670630 DOI: 10.1371/Journal.Pgen.1000147 |
0.543 |
|
| 2008 |
Jakobsson M, Scholz SW, Scheet P, Gibbs JR, VanLiere JM, Fung HC, Szpiech ZA, Degnan JH, Wang K, Guerreiro R, Bras JM, Schymick JC, Hernandez DG, Traynor BJ, Simon-Sanchez J, et al. Genotype, haplotype and copy-number variation in worldwide human populations. Nature. 451: 998-1003. PMID 18288195 DOI: 10.1038/Nature06742 |
0.383 |
|
| 2008 |
Willer CJ, Sanna S, Jackson AU, Scuteri A, Bonnycastle LL, Clarke R, Heath SC, Timpson NJ, Najjar SS, Stringham HM, Strait J, Duren WL, Maschio A, Busonero F, Mulas A, ... ... Scheet PA, et al. Newly identified loci that influence lipid concentrations and risk of coronary artery disease. Nature Genetics. 40: 161-9. PMID 18193043 DOI: 10.1038/Ng.76 |
0.334 |
|
| 2006 |
Scheet P, Stephens M. A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase. American Journal of Human Genetics. 78: 629-44. PMID 16532393 DOI: 10.1086/502802 |
0.523 |
|
| 2006 |
Stephens M, Sloan JS, Robertson PD, Scheet P, Nickerson DA. Automating sequence-based detection and genotyping of SNPs from diploid samples. Nature Genetics. 38: 375-81. PMID 16493422 DOI: 10.1038/Ng1746 |
0.545 |
|
| 2005 |
Sieh W, Basu S, Fu AQ, Rothstein JH, Scheet PA, Stewart WC, Sung YJ, Thompson EA, Wijsman EM. Comparison of marker types and map assumptions using Markov chain Monte Carlo-based linkage analysis of COGA data. Bmc Genetics. 6: S11. PMID 16451566 DOI: 10.1186/1471-2156-6-S1-S11 |
0.327 |
|
| 2005 |
Stephens M, Scheet P. Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputation. American Journal of Human Genetics. 76: 449-62. PMID 15700229 DOI: 10.1086/428594 |
0.524 |
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