Sruthilaya K. Swaminathan - Publications

Affiliations: 
2012 Neurobiology University of Chicago, Chicago, IL 

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Munusamy Ponnan S, Swaminathan S, Tiruvengadam K, K K V, Cheedarla N, Nesakumar M, Kathirvel S, Goyal R, Singla N, Mukherjee J, Bergin P, T Kopycinski J, Gilmour J, Prasad Tripathy S, Elizabeth LH. Induction of circulating T follicular helper cells and regulatory T cells correlating with HIV-1 gp120 variable loop antibodies by a subtype C prophylactic vaccine tested in a Phase I trial in India. Plos One. 13: e0203037. PMID 30157242 DOI: 10.1371/journal.pone.0203037  0.68
2013 Goble AM, Toro R, Li X, Ornelas A, Fan H, Eswaramoorthy S, Patskovsky Y, Hillerich B, Seidel R, Sali A, Shoichet BK, Almo SC, Swaminathan S, Tanner ME, Raushel FM. Deamination of 6-aminodeoxyfutalosine in menaquinone biosynthesis by distantly related enzymes. Biochemistry. 52: 6525-36. PMID 23972005 DOI: 10.1021/bi400750a  0.44
2013 Swaminathan SK, Masse NY, Freedman DJ. A comparison of lateral and medial intraparietal areas during a visual categorization task. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 13157-70. PMID 23926269 DOI: 10.1523/JNEUROSCI.5723-12.2013  1
2013 Ornelas A, Korczynska M, Ragumani S, Kumaran D, Narindoshvili T, Shoichet BK, Swaminathan S, Raushel FM. Functional annotation and three-dimensional structure of an incorrectly annotated dihydroorotase from cog3964 in the amidohydrolase superfamily. Biochemistry. 52: 228-38. PMID 23214420 DOI: 10.1021/bi301483z  0.44
2012 Fitzgerald JK, Swaminathan SK, Freedman DJ. Visual categorization and the parietal cortex. Frontiers in Integrative Neuroscience. 6: 18. PMID 22582040 DOI: 10.3389/fnint.2012.00018  1
2012 Kumar G, Kumaran D, Ahmed SA, Swaminathan S. Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling. Acta Crystallographica. Section D, Biological Crystallography. 68: 511-20. PMID 22525749 DOI: 10.1107/S0907444912003551  0.48
2012 Swaminathan SK, Freedman DJ. Preferential encoding of visual categories in parietal cortex compared with prefrontal cortex. Nature Neuroscience. 15: 315-20. PMID 22246435 DOI: 10.1038/nn.3016  1
2012 Lu X, Zhou R, Sharma I, Li X, Kumar G, Swaminathan S, Tonge PJ, Tan DS. Stable analogues of OSB-AMP: potent inhibitors of MenE, the o-succinylbenzoate-CoA synthetase from bacterial menaquinone biosynthesis. Chembiochem : a European Journal of Chemical Biology. 13: 129-36. PMID 22109989 DOI: 10.1002/cbic.201100585  0.44
2012 Agarwal R, Burley SK, Swaminathan S. Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase. Proteins. 80: 261-8. PMID 22072612 DOI: 10.1002/prot.23202  0.64
2011 Kamat SS, Holmes-Hampton GP, Bagaria A, Kumaran D, Tichy SE, Gheyi T, Zheng X, Bain K, Groshong C, Emtage S, Sauder JM, Burley SK, Swaminathan S, Lindahl PA, Raushel FM. The catalase activity of diiron adenine deaminase. Protein Science : a Publication of the Protein Society. 20: 2080-94. PMID 21998098 DOI: 10.1002/pro.748  0.44
2011 Goble AM, Zhang Z, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Pa0148 from Pseudomonas aeruginosa catalyzes the deamination of adenine. Biochemistry. 50: 6589-97. PMID 21710971 DOI: 10.1021/bi200868u  0.44
2011 Kamat SS, Bagaria A, Kumaran D, Holmes-Hampton GP, Fan H, Sali A, Sauder JM, Burley SK, Lindahl PA, Swaminathan S, Raushel FM. Catalytic mechanism and three-dimensional structure of adenine deaminase. Biochemistry. 50: 1917-27. PMID 21247091 DOI: 10.1021/bi101788n  0.44
2011 Callebaut C, Stray K, Tsai L, Williams M, Yang ZY, Cannizzaro C, Leavitt SA, Liu X, Wang K, Murray BP, Mulato A, Hatada M, Priskich T, Parkin N, Swaminathan S, et al. In vitro characterization of GS-8374, a novel phosphonate-containing inhibitor of HIV-1 protease with a favorable resistance profile. Antimicrobial Agents and Chemotherapy. 55: 1366-76. PMID 21245449 DOI: 10.1128/AAC.01183-10  0.36
2010 Hall RS, Agarwal R, Hitchcock D, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Discovery and structure determination of the orphan enzyme isoxanthopterin deaminase . Biochemistry. 49: 4374-82. PMID 20415463 DOI: 10.1021/bi100252s  0.44
2009 Xiang DF, Xu C, Kumaran D, Brown AC, Sauder JM, Burley SK, Swaminathan S, Raushel FM. Functional annotation of two new carboxypeptidases from the amidohydrolase superfamily of enzymes. Biochemistry. 48: 4567-76. PMID 19358546 DOI: 10.1021/bi900453u  0.44
2008 Legler PM, Kumaran D, Swaminathan S, Studier FW, Millard CB. Structural characterization and reversal of the natural organophosphate resistance of a D-type esterase, Saccharomyces cerevisiae S-formylglutathione hydrolase. Biochemistry. 47: 9592-601. PMID 18707125 DOI: 10.1021/bi8010016  0.44
2008 Agarwal R, Swaminathan S. SNAP-25 substrate peptide (residues 180-183) binds to but bypasses cleavage by catalytically active Clostridium botulinum neurotoxin E. The Journal of Biological Chemistry. 283: 25944-51. PMID 18658150 DOI: 10.1074/jbc.M803756200  0.64
2008 Kumaran D, Rawat R, Ludivico ML, Ahmed SA, Swaminathan S. Structure- and substrate-based inhibitor design for Clostridium botulinum neurotoxin serotype A. The Journal of Biological Chemistry. 283: 18883-91. PMID 18434312 DOI: 10.1074/jbc.M801240200  0.44
2007 Albu TV, Swaminathan S. Hybrid density functional theory with a specific reaction parameter: hydrogen abstraction reaction of difluoromethane by the hydroxyl radical. Journal of Molecular Modeling. 13: 1109-21. PMID 17704956 DOI: 10.1007/s00894-007-0235-2  0.68
2006 Albu TV, Swaminathan S. Hybrid density functional theory with specific reaction parameter: hydrogen abstraction reaction of fluoromethane by the hydroxyl radical. The Journal of Physical Chemistry. A. 110: 7663-71. PMID 16774212 DOI: 10.1021/jp0615454  0.68
2005 Navin Gupta C, Palaniappan R, Swaminathan S. Classification of homomorphic segmented phonocardiogram signals using grow and learn network. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 4251-4. PMID 17281173 DOI: 10.1109/IEMBS.2005.1615403  0.76
2004 Visco DP, Swaminathan S, Mohan TR, Sokolow A, Sen S. Impulse penetration into idealized granular beds: behavior of cumulative surface kinetic energy. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 051306. PMID 15600602 DOI: 10.1103/PhysRevE.70.051306  0.32
2001 Kumaran D, Eswaramoorthy S, Furey W, Sax M, Swaminathan S. Structure of staphylococcal enterotoxin C2 at various pH levels. Acta Crystallographica. Section D, Biological Crystallography. 57: 1270-5. PMID 11526318  0.48
1992 Klooster WT, Swaminathan S, Nanni R, Craven BM. Electrostatic properties of 1-methyluracil from diffraction data. Acta Crystallographica. Section B, Structural Science. 48: 217-27. PMID 1515111  0.36
1989 Ravishanker G, Swaminathan S, Beveridge DL, Lavery R, Sklenar H. Conformational and helicoidal analysis of 30 PS of molecular dynamics on the d(CGCGAATTCGCG) double helix: "curves", dials and windows. Journal of Biomolecular Structure & Dynamics. 6: 669-99. PMID 2619934 DOI: 10.1080/07391102.1989.10507729  0.36
1988 He XM, Swaminathan S, Craven BM, McMullan RK. Thermal vibrations and electrostatic properties of parabanic acid at 123 and 298 K. Acta Crystallographica. Section B, Structural Science. 44: 271-81. PMID 3271109 DOI: 10.1107/S0108768187011108  0.36
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