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Tamara L. Kinzer-Ursem - Publications

Affiliations: 
Biomedical Engineering  Purdue University, West Lafayette, IN, United States 
Area:
Molecular Neurobiology
Website:
https://engineering.purdue.edu/Engr/People/NewFaculty/New_Faculty_2012/KinzerUrsem.htm
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18/47 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Pharris MC, Patel NM, VanDyk TG, Bartol TM, Sejnowski TJ, Kennedy MB, Stefan MI, Kinzer-Ursem TL. A Multi-State Model of the CaMKII Dodecamer Suggests a Role for Calmodulin in Maintenance of Autophosphorylation. Plos Computational Biology. 15: e1006941. PMID 31869343 DOI: 10.1371/Journal.Pcbi.1006941  0.682
2019 Saleh AM, Jacobson KR, Kinzer-Ursem TL, Calve S. Dynamics of Non-Canonical Amino Acid-Labeled Intra- and Extracellular Proteins in the Developing Mouse. Cellular and Molecular Bioengineering. 12: 495-509. PMID 31719929 DOI: 10.1007/S12195-019-00592-1  0.344
2019 Ejendal KFK, Fraseur JG, Kinzer-Ursem TL. Protein Labeling and Bioconjugation Using N-Myristoyltransferase. Methods in Molecular Biology (Clifton, N.J.). 2033: 149-165. PMID 31332753 DOI: 10.1007/978-1-4939-9654-4_11  0.357
2019 Saleh AM, Wilding KM, Calve S, Bundy BC, Kinzer-Ursem TL. Non-canonical amino acid labeling in proteomics and biotechnology. Journal of Biological Engineering. 13: 43. PMID 31139251 DOI: 10.1186/S13036-019-0166-3  0.345
2018 Pharris MC, Patel NM, Kinzer-Ursem TL. Competitive Tuning Among Ca/Calmodulin-Dependent Proteins: Analysis of Model Robustness and Parameter Variability. Cellular and Molecular Bioengineering. 11: 353-365. PMID 31105797 DOI: 10.1007/s12195-018-0549-4  0.493
2018 Fraseur JG, Kinzer-Ursem TL. Next generation calmodulin affinity purification: Clickable calmodulin facilitates improved protein purification. Plos One. 13: e0197120. PMID 29864125 DOI: 10.1371/journal.pone.0197120  0.415
2017 Romano DR, Pharris MC, Patel NM, Kinzer-Ursem TL. Competitive tuning: Competition's role in setting the frequency-dependence of Ca2+-dependent proteins. Plos Computational Biology. 13: e1005820. PMID 29107982 DOI: 10.1371/journal.pcbi.1005820  0.475
2017 Witten AJ, Ejendal KFK, Gengelbach LM, Traore MA, Wang X, Umulis DM, Calve S, Kinzer-Ursem TL. Fluorescent imaging of protein myristoylation during cellular differentiation and development. Journal of Lipid Research. PMID 28754825 DOI: 10.1194/Jlr.D074070  0.35
2016 Calve S, Witten AJ, Ocken AR, Kinzer-Ursem TL. Incorporation of non-canonical amino acids into the developing murine proteome. Scientific Reports. 6: 32377. PMID 27572480 DOI: 10.1038/Srep32377  0.305
2015 Kulkarni C, Lo M, Fraseur JG, Tirrell DA, Kinzer-Ursem TL. Bioorthogonal Chemoenzymatic Functionalization of Calmodulin for Bioconjugation Applications. Bioconjugate Chemistry. PMID 26431265 DOI: 10.1021/acs.bioconjchem.5b00449  0.579
2013 Kulkarni C, Kinzer-Ursem TL, Tirrell DA. Selective functionalization of the protein N terminus with N-myristoyl transferase for bioconjugation in cell lysate. Chembiochem : a European Journal of Chemical Biology. 14: 1958-62. PMID 24030852 DOI: 10.1002/cbic.201300453  0.526
2013 Kinzer-Ursem TL, Linderman JJ. Protean Agonism in the α 2A -Adrenergic System Plos Computational Biology. DOI: 10.1371/Journal.Pcbi.0030006.G006  0.471
2013 Kulkarni C, Tirrell DA, Kinzer-Ursem TL. Chemoenzymatic labeling of recombinant proteins enables rapid in-lysate bioconjugation and assay development Food, Pharmaceutical and Bioengineering Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 265.  0.462
2010 Pepke S, Kinzer-Ursem T, Mihalas S, Kennedy MB. A dynamic model of interactions of Ca2+, calmodulin, and catalytic subunits of Ca2+/calmodulin-dependent protein kinase II. Plos Computational Biology. 6: e1000675. PMID 20168991 DOI: 10.1371/Journal.Pcbi.1000675  0.655
2007 Kinzer-Ursem TL, Linderman JJ. Both ligand- and cell-specific parameters control ligand agonism in a kinetic model of g protein-coupled receptor signaling. Plos Computational Biology. 3: e6. PMID 17222056 DOI: 10.1371/journal.pcbi.0030006  0.62
2006 Kinzer-Ursem TL, Sutton KL, Waller A, Omann GM, Linderman JJ. Multiple receptor states are required to describe both kinetic binding and activation of neutrophils via N-formyl peptide receptor ligands. Cellular Signalling. 18: 1732-47. PMID 16530386 DOI: 10.1016/J.Cellsig.2006.01.014  0.661
2005 Kinzer-Ursem TL, Linderman JJ. Cell-specific and ligand-specific parameters affect ligand efficacy in a kinetic model of G protein coupled receptor signaling Aiche Annual Meeting, Conference Proceedings. 8299.  0.585
2004 Waller A, Sutton KL, Kinzer-Ursem TL, Absood A, Traynor JR, Linderman JJ, Omann GM. Receptor binding kinetics and cellular responses of six N-formyl peptide agonists in human neutrophils. Biochemistry. 43: 8204-16. PMID 15209517 DOI: 10.1021/Bi035335I  0.681
Low-probability matches (unlikely to be authored by this person)
2016 Benjamin CJ, Wright KJ, Bolton SC, Hyun SH, Krynski K, Grover M, Yu G, Guo F, Kinzer-Ursem TL, Jiang W, Thompson DH. Selective Capture of Histidine-tagged Proteins from Cell Lysates Using TEM grids Modified with NTA-Graphene Oxide. Scientific Reports. 6: 32500. PMID 27748364 DOI: 10.1038/Srep32500  0.293
2017 Clayton KN, Lee D, Wereley ST, Kinzer-Ursem TL. Measuring biotherapeutic viscosity and degradation on-chip with particle diffusometry. Lab On a Chip. PMID 29115357 DOI: 10.1039/C7Lc00507E  0.266
2020 Puvar K, Saleh AM, Curtis R, Zhou Y, Nyalapatla PR, Fu J, Rovira AR, Tor Y, Luo ZQ, Ghosh AK, Wirth MJ, Chmielewski J, Kinzer-Ursem TL, Das C. Fluorescent Probes for Monitoring Serine Ubiquitination. Biochemistry. PMID 32207972 DOI: 10.1021/Acs.Biochem.0C00067  0.261
2023 Saini G, Parasa MK, Clayton KN, Fraseur JG, Bolton SC, Lin KP, Wereley ST, Kinzer-Ursem TL. Immobilization of azide-functionalized proteins to micro- and nanoparticles directly from cell lysate. Mikrochimica Acta. 191: 46. PMID 38129631 DOI: 10.1007/s00604-023-06068-4  0.26
2022 Ma H, Wereley ST, Linnes JC, Kinzer-Ursem TL. Measurement of Protein-Protein Interaction Dynamics Using Microfluidics and Particle Diffusometry. Analytical Chemistry. PMID 36316007 DOI: 10.1021/acs.analchem.2c02570  0.253
2017 Kinzer-Ursem T. Relieving the Pressure on Tissue Development. Biophysical Journal. 113: 360-361. PMID 28746846 DOI: 10.1016/J.Bpj.2017.06.006  0.249
2017 Pharris MC, Wu TC, Chen X, Wang X, Umulis DM, Weake VM, Kinzer-Ursem TL. An automated workflow for quantifying RNA transcripts in individual cells in large data-sets. Methodsx. 4: 279-288. PMID 28932696 DOI: 10.1016/J.Mex.2017.08.002  0.246
2019 Lin KP, Saleh AM, Jacobson KR, Calve S, Kinzer-Ursem TL. Probing the Dynamics of Neuronal Proteins In Vivo Using Non-Canonical Amino Acids Tagging Proceedings of Imprs. 2. DOI: 10.18060/23529  0.24
2020 Libring S, Shinde A, Chanda MK, Nuru M, George H, Saleh AM, Abdullah A, Kinzer-Ursem TL, Calve S, Wendt MK, Solorio L. The Dynamic Relationship of Breast Cancer Cells and Fibroblasts in Fibronectin Accumulation at Primary and Metastatic Tumor Sites. Cancers. 12. PMID 32429591 DOI: 10.3390/Cancers12051270  0.238
2019 Clayton KN, Moehling TJ, Lee DH, Wereley ST, Linnes JC, Kinzer-Ursem TL. Particle Diffusometry: An Optical Detection Method for Vibrio cholerae Presence in Environmental Water Samples. Scientific Reports. 9: 1739. PMID 30741961 DOI: 10.1038/S41598-018-38056-7  0.238
2020 Ocken AR, Ku MM, Kinzer-Ursem TL, Calve S. Perlecan knockdown significantly alters extracellular matrix composition and organization during cartilage development. Molecular & Cellular Proteomics : McP. PMID 32381549 DOI: 10.1074/Mcp.Ra120.001998  0.235
2017 Clayton KN, Berglund GD, Linnes JC, Kinzer-Ursem TL, Wereley ST. DNA Microviscosity Characterization with Particle Diffusometry for Downstream DNA Detection Applications. Analytical Chemistry. PMID 29148723 DOI: 10.1021/Acs.Analchem.7B03513  0.233
2020 Moehling TJ, Lee DH, Henderson ME, McDonald MK, Tsang PH, Kaakeh S, Kim ES, Wereley ST, Kinzer-Ursem TL, Clayton KN, Linnes JC. A smartphone-based particle diffusometry platform for sub-attomolar detection of Vibrio cholerae in environmental water. Biosensors & Bioelectronics. 167: 112497. PMID 32836088 DOI: 10.1016/J.Bios.2020.112497  0.233
2019 Pharris MC, Patel NM, Wilson LJ, Rust CW, Kinzer-Ursem TL. Calcium Frequency Sets the Location of Calmodulin-Dependent Enzyme Activation in Dendritic Spines Biophysical Journal. 116. DOI: 10.1016/J.Bpj.2018.11.2297  0.23
2016 Clayton KN, Salameh JW, Wereley ST, Kinzer-Ursem TL. Physical characterization of nanoparticle size and surface modification using particle scattering diffusometry. Biomicrofluidics. 10: 054107. PMID 27703593 DOI: 10.1063/1.4962992  0.228
2023 Saleh AM, VanDyk TG, Jacobson KR, Khan SA, Calve S, Kinzer-Ursem TL. An Integrative Biology Approach to Quantify the Biodistribution of Azidohomoalanine . Cellular and Molecular Bioengineering. 16: 99-115. PMID 37096070 DOI: 10.1007/s12195-023-00760-4  0.217
2017 Sarker JM, Pearce SM, Nelson RP, Kinzer-Ursem TL, Umulis DM, Rundell AE. An Integrative multi-lineage model of variation in leukopoiesis and acute myelogenous leukemia. Bmc Systems Biology. 11: 78. PMID 28841879 DOI: 10.1186/S12918-017-0469-2  0.214
2017 Phillips EH, Chang MS, Gorman S, Qureshi HJ, Ejendal KFK, Kinzer-Ursem TL, Blaize AN, Goergen CJ. Angiotensin II Infusion Does Not Cause Abdominal Aortic Aneurysms in Apolipoprotein E-Deficient Rats. Journal of Vascular Research. 55: 1-12. PMID 29166645 DOI: 10.1159/000484086  0.212
2024 Bolton SC, Thompson DH, Kinzer-Ursem TL. Methods optimization for the expression and purification of human calcium calmodulin-dependent protein kinase II alpha. Plos One. 19: e0285651. PMID 38180986 DOI: 10.1371/journal.pone.0285651  0.176
2024 Jacobson KR, Saleh AM, Lipp SN, Tian C, Watson AR, Luetkemeyer CM, Ocken AR, Spencer SL, Kinzer-Ursem TL, Calve S. Extracellular matrix protein composition dynamically changes during murine forelimb development. Iscience. 27: 108838. PMID 38303699 DOI: 10.1016/j.isci.2024.108838  0.14
2024 Ma H, Ramanujam AA, Linnes JC, Kinzer-Ursem TL. Biomolecular Interaction Analysis Quantification with a Low-Volume Microfluidic Chip and Particle Diffusometry. Analytical Chemistry. 96: 5815-5823. PMID 38575144 DOI: 10.1021/acs.analchem.3c04840  0.12
2023 Min S, Mohallem R, Aryal UK, Kinzer-Ursem TL, Rochet JC. Effects of Neighboring Phosphorylation Events on the Affinities of pT181-Tau Antibodies. Analytical Chemistry. PMID 38014879 DOI: 10.1021/acs.analchem.3c04081  0.119
2020 Ocken AR, Ku MM, Kinzer-Ursem TL, Calve S. Perlecan Knockdown Significantly Alters Extracellular Matrix Composition and Organization During Cartilage Development. Molecular & Cellular Proteomics : McP. 19: 1220-1235. PMID 33451410 DOI: 10.1074/mcp.RA120.001998  0.097
2022 Colbert AJ, Lee DH, Clayton KN, Wereley ST, Linnes JC, Kinzer-Ursem TL. PD-LAMP smartphone detection of SARS-CoV-2 on chip. Analytica Chimica Acta. 1203: 339702. PMID 35361434 DOI: 10.1016/j.aca.2022.339702  0.089
2024 Ma H, Kinzer-Ursem TL, Linnes JC. Two-phase Porous Media Flow Model Based on the Incompressible Navier-Stokes Equation. Analytical Chemistry. PMID 38502904 DOI: 10.1021/acs.analchem.3c05982  0.078
2023 Giolando PA, Hopkins K, Davis B, Vike N, Ahmadzadegan A, Ardekani A, Vlachos P, Rispoli J, Solorio L, Kinzer-Ursem TL. Mechanistic computational modeling of implantable, bioresorbable, drug release systems. Advanced Materials (Deerfield Beach, Fla.). e2301698. PMID 37243452 DOI: 10.1002/adma.202301698  0.056
2023 Lee DH, Clayton KN, Kinzer-Ursem TL, Linnes JC, Wereley ST. Quantifying Brownian motion in the presence of simple shear flow with particle diffusometry. Experiments in Fluids. 64: 26. PMID 36711431 DOI: 10.1007/s00348-022-03566-8  0.054
2021 Colbert AJ, Co K, Lima-Cooper G, Lee DH, Clayton KN, Wereley ST, John CC, Linnes JC, Kinzer-Ursem TL. Towards the use of a smartphone imaging-based tool for point-of-care detection of asymptomatic low-density malaria parasitaemia. Malaria Journal. 20: 380. PMID 34563189 DOI: 10.1186/s12936-021-03894-w  0.052
2015 Mishr A, Khor JW, Clayton KN, Williams SJ, Pan X, Kinzer-Ursem T, Wereley S. Optoelectric Patterning: effect of electrode material and thickness on laser-induced AC electrothermal flow. Electrophoresis. PMID 26613811 DOI: 10.1002/elps.201500473  0.027
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