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Patrick D. McMullen, Ph.D. - Publications

Affiliations: 
Chemical and Biological Engineering Northwestern University, Evanston, IL 
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10 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Barutcu AR, Black MB, Samuel R, Slattery S, McMullen PD, Nong A. Integrating gene expression and splicing dynamics across dose-response oxidative modulators. Frontiers in Genetics. 15: 1389095. PMID 38846964 DOI: 10.3389/fgene.2024.1389095  0.352
2018 Haider S, Black MB, Parks BB, Foley B, Wetmore BA, Andersen ME, Clewell RA, Mansouri K, McMullen PD. A Qualitative Modeling Approach for Whole Genome Prediction Using High-Throughput Toxicogenomics Data and Pathway-Based Validation. Frontiers in Pharmacology. 9: 1072. PMID 30333746 DOI: 10.3389/Fphar.2018.01072  0.337
2016 Pendse SN, Maertens A, Rosenberg M, Roy D, Fasani RA, Vantangoli MM, Madnick SJ, Boekelheide K, Fornace AJ, Odwin SA, Yager JD, Hartung T, Andersen ME, McMullen PD. Information-dependent enrichment analysis reveals time-dependent transcriptional regulation of the estrogen pathway of toxicity. Archives of Toxicology. PMID 27592001 DOI: 10.1007/S00204-016-1824-6  0.338
2014 Deisenroth C, Black MB, Pendse S, Pluta L, Witherspoon SM, McMullen PD, Thomas RS. MYC is an early response regulator of human adipogenesis in adipose stem cells. Plos One. 9: e114133. PMID 25437437 DOI: 10.1371/journal.pone.0114133  0.392
2014 McMullen PD, Bhattacharya S, Woods CG, Sun B, Yarborough K, Ross SM, Miller ME, McBride MT, LeCluyse EL, Clewell RA, Andersen ME. A map of the PPARα transcription regulatory network for primary human hepatocytes. Chemico-Biological Interactions. 209: 14-24. PMID 24269660 DOI: 10.1016/J.Cbi.2013.11.006  0.361
2013 Guisbert E, Czyz DM, Richter K, McMullen PD, Morimoto RI. Identification of a tissue-selective heat shock response regulatory network. Plos Genetics. 9: e1003466. PMID 23637632 DOI: 10.1371/Journal.Pgen.1003466  0.365
2013 Andersen ME, McMullen PD, Bhattacharya S. Toxicogenomics for transcription factor-governed molecular pathways: moving on to roles beyond classification and prediction. Archives of Toxicology. 87: 7-11. PMID 23184225 DOI: 10.1007/S00204-012-0980-6  0.31
2012 Bhattacharya S, Shoda LK, Zhang Q, Woods CG, Howell BA, Siler SQ, Woodhead JL, Yang Y, McMullen P, Watkins PB, Andersen ME. Modeling drug- and chemical-induced hepatotoxicity with systems biology approaches. Frontiers in Physiology. 3: 462. PMID 23248599 DOI: 10.3389/Fphys.2012.00462  0.301
2012 McMullen PD, Aprison EZ, Winter PB, Amaral LA, Morimoto RI, Ruvinsky I. Macro-level modeling of the response of C. elegans reproduction to chronic heat stress. Plos Computational Biology. 8: e1002338. PMID 22291584 DOI: 10.1371/Journal.Pcbi.1002338  0.504
2010 McMullen PD, Morimoto RI, Amaral LA. Physically grounded approach for estimating gene expression from microarray data. Proceedings of the National Academy of Sciences of the United States of America. 107: 13690-5. PMID 20643961 DOI: 10.1073/Pnas.1000938107  0.477
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