Param Priya Singh - Publications

Affiliations: 
Genetics Stanford University, Palo Alto, CA 

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Singh PP, Benayoun BA. Considerations for reproducible omics in aging research. Nature Aging. PMID 37386258 DOI: 10.1038/s43587-023-00448-4  0.692
2023 Reeves GA, Singh PP, Brunet A. Chromatin Accessibility Profiling and Data Analysis using ATAC-seq in . Cold Spring Harbor Protocols. PMID 37100469 DOI: 10.1101/pdb.prot107747  0.655
2022 Teefy BB, Adler A, Xu A, Hsu K, Singh PP, Benayoun BA. Dynamic regulation of gonadal transposon control across the lifespan of the naturally short-lived African turquoise killifish. Genome Research. PMID 36577520 DOI: 10.1101/gr.277301.122  0.74
2020 Hu CK, Wang W, Brind'Amour J, Singh PP, Reeves GA, Lorincz MC, Alvarado AS, Brunet A. Vertebrate diapause preserves organisms long term through Polycomb complex members. Science (New York, N.Y.). 367: 870-874. PMID 32079766 DOI: 10.1126/Science.Aaw2601  0.718
2019 Singh PP, Isambert H. OHNOLOGS v2: a comprehensive resource for the genes retained from whole genome duplication in vertebrates. Nucleic Acids Research. PMID 31612943 DOI: 10.1093/Nar/Gkz909  0.374
2019 Singh PP, Demmitt BA, Nath RD, Brunet A. The Genetics of Aging: A Vertebrate Perspective. Cell. 177: 200-220. PMID 30901541 DOI: 10.1016/J.Cell.2019.02.038  0.782
2019 Benayoun BA, Pollina EA, Singh PP, Mahmoudi S, Harel I, Casey KM, Dulken BW, Kundaje A, Brunet A. Remodeling of epigenome and transcriptome landscapes with aging in mice reveals widespread induction of inflammatory responses. Genome Research. PMID 30858345 DOI: 10.1101/Gr.240093.118  0.594
2018 Wagner JT, Singh PP, Romney AL, Riggs CL, Minx P, Woll SC, Roush J, Warren WC, Brunet A, Podrabsky JE. The genome of Austrofundulus limnaeus offers insights into extreme vertebrate stress tolerance and embryonic development. Bmc Genomics. 19: 155. PMID 29463212 DOI: 10.1186/S12864-018-4539-7  0.58
2017 Verny L, Sella N, Affeldt S, Singh PP, Isambert H. Learning causal networks with latent variables from multivariate information in genomic data. Plos Computational Biology. 13: e1005662. PMID 28968390 DOI: 10.1371/Journal.Pcbi.1005662  0.345
2017 Kao AW, McKay A, Singh PP, Brunet A, Huang EJ. Progranulin, lysosomal regulation and neurodegenerative disease. Nature Reviews. Neuroscience. PMID 28435163 DOI: 10.1038/Nrn.2017.36  0.707
2015 Valenzano DR, Benayoun BA, Singh PP, Zhang E, Etter PD, Hu CK, Clément-Ziza M, Willemsen D, Cui R, Harel I, Machado BE, Yee MC, Sharp SC, Bustamante CD, Beyer A, et al. The African Turquoise Killifish Genome Provides Insights into Evolution and Genetic Architecture of Lifespan. Cell. 163: 1539-54. PMID 26638078 DOI: 10.1016/J.Cell.2015.11.008  0.696
2015 Singh PP, Arora J, Isambert H. Identification of Ohnolog Genes Originating from Whole Genome Duplication in Early Vertebrates, Based on Synteny Comparison across Multiple Genomes. Plos Computational Biology. 11: e1004394. PMID 26181593 DOI: 10.1371/Journal.Pcbi.1004394  0.466
2015 Harel I, Benayoun BA, Machado B, Singh PP, Hu CK, Pech MF, Valenzano DR, Zhang E, Sharp SC, Artandi SE, Brunet A. A platform for rapid exploration of aging and diseases in a naturally short-lived vertebrate. Cell. 160: 1013-26. PMID 25684364 DOI: 10.1016/J.Cell.2015.01.038  0.724
2014 Singh PP, Affeldt S, Malaguti G, Isambert H. Human dominant disease genes are enriched in paralogs originating from whole genome duplication. Plos Computational Biology. 10: e1003754. PMID 25080083 DOI: 10.1371/Journal.Pcbi.1003754  0.381
2014 Malaguti G, Singh PP, Isambert H. On the retention of gene duplicates prone to dominant deleterious mutations. Theoretical Population Biology. 93: 38-51. PMID 24530892 DOI: 10.1016/J.Tpb.2014.01.004  0.382
2014 Affeldt S, Singh PP, Malaguti G, Isambert H. On the expansion of “dangerous” gene families in vertebrates Bmc Bioinformatics. 15: 1-2. DOI: 10.1186/1471-2105-15-S3-A4  0.328
2012 Singh PP, Affeldt S, Cascone I, Selimoglu R, Camonis J, Isambert H. On the expansion of "dangerous" gene repertoires by whole-genome duplications in early vertebrates. Cell Reports. 2: 1387-1398. PMID 23168259 DOI: 10.1016/J.Celrep.2012.09.034  0.421
Show low-probability matches.