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A. Daniel Jones, Ph.D. - Publications

Affiliations: 
1976-1983 Biochemistry and Molecular Biology Michigan State University, East Lansing, MI 
 1984-1998 University of California, Davis, Davis, CA 
 1998-2005 Chemistry Pennsylvania State University, State College, PA, United States 
 2005- Biochemistry and Molecular Biology Michigan State University, East Lansing, MI 
Area:
metabolomics, mass spectrometry, analytical chemistry, natural products, chemical ecology, chromatography, environmental chemistry, exposomics, toxicology, nutritional biochemistry
Website:
https://bmb.natsci.msu.edu/faculty/a-daniel-jones/
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120 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Kerwin RE, Hart JE, Fiesel PD, Lou YR, Fan P, Jones AD, Last RL. Tomato root specialized metabolites evolved through gene duplication and regulatory divergence within a biosynthetic gene cluster. Science Advances. 10: eadn3991. PMID 38657073 DOI: 10.1126/sciadv.adn3991  0.593
2023 Kheirkhah Rahimabad P, Jones AD, Zhang H, Chen S, Jiang Y, Ewart S, Holloway JW, Arshad H, Eslamimehr S, Bruce R, Karmaus W. Polymorphisms in Glutathione S-Transferase () Genes Modify the Effect of Exposure to Maternal Smoking Metabolites in Pregnancy and Offspring DNA Methylation. Genes. 14. PMID 37628696 DOI: 10.3390/genes14081644  0.478
2023 Karmaus W, Kheirkhah Rahimabad P, Pham N, Mukherjee N, Chen S, Anthony TM, Arshad HS, Rathod A, Sultana N, Jones AD. Association of Metabolites, Nutrients, and Toxins in Maternal and Cord Serum with Asthma, IgE, SPT, FeNO, and Lung Function in Offspring. Metabolites. 13. PMID 37367895 DOI: 10.3390/metabo13060737  0.411
2023 Ziyab AH, Jones AD, Chen S, Anthony TM, Mukherjee N, Arshad SH, Karmaus W. Fucoxanthin levels in maternal serum at birth and eczema risk in offspring in early childhood: A birth cohort study. Pediatric Allergy and Immunology : Official Publication of the European Society of Pediatric Allergy and Immunology. 34: e13979. PMID 37366203 DOI: 10.1111/pai.13979  0.381
2023 Fiesel PD, Kerwin RE, Jones AD, Last RL. Trading acyls and swapping sugars: metabolic innovations in trichomes. Biorxiv : the Preprint Server For Biology. PMID 37333341 DOI: 10.1101/2023.06.05.542877  0.582
2022 Parks HM, Cinelli MA, Bedewitz MA, Grabar JM, Hurney SM, Walker KD, Jones AD, Barry CS. Redirecting tropane alkaloid metabolism reveals pyrrolidine alkaloid diversity in Atropa belladonna. The New Phytologist. PMID 36451537 DOI: 10.1111/nph.18651  0.715
2022 Leong BJ, Hurney S, Fiesel P, Anthony TM, Moghe G, Jones AD, Last RL. Identification of BAHD acyltransferases associated with acylinositol biosynthesis in (naranjilla). Plant Direct. 6: e415. PMID 35774622 DOI: 10.1002/pld3.415  0.613
2022 Li X, Sarma SJ, Sumner LW, Jones AD, Last RL. Switchgrass Metabolomics Reveals Striking Genotypic and Developmental Differences in Specialized Metabolic Phenotypes. Journal of Agricultural and Food Chemistry. PMID 35729681 DOI: 10.1021/acs.jafc.2c01306  0.587
2022 Schenck CA, Anthony TM, Jacobs M, Jones AD, Last RL. Natural Variation Meets Synthetic Biology: Promiscuous Trichome-Expressed Acyltransferases from Nicotiana. Plant Physiology. PMID 35477794 DOI: 10.1093/plphys/kiac192  0.626
2022 Eslamimehr S, Jones AD, Anthony TM, Arshad SH, Holloway JW, Ewart S, Luo R, Mukherjee N, Kheirkhah Rahimabad P, Chen S, Karmaus W. Association of prenatal acetaminophen use and acetaminophen metabolites with DNA methylation of newborns: analysis of two consecutive generations of the Isle of Wight birth cohort. Environmental Epigenetics. 8: dvac002. PMID 35317219 DOI: 10.1093/eep/dvac002  0.39
2021 Lou YR, Anthony TM, Fiesel PD, Arking RE, Christensen EM, Jones AD, Last RL. It happened again: Convergent evolution of acylglucose specialized metabolism in black nightshade and wild tomato. Science Advances. 7: eabj8726. PMID 34757799 DOI: 10.1126/sciadv.abj8726  0.541
2021 Cinelli MA, Jones AD. Alkaloids of the Genus : Review of a Rich Resource for Natural Product Discovery. Molecules (Basel, Switzerland). 26. PMID 33946338 DOI: 10.3390/molecules26092629  0.7
2020 Kheirkhah Rahimabad P, Anthony TM, Jones AD, Eslamimehr S, Mukherjee N, Ewart S, Holloway JW, Arshad H, Commodore S, Karmaus W. Nicotine and Its Downstream Metabolites in Maternal and Cord Sera: Biomarkers of Prenatal Smoking Exposure Associated with Offspring DNA Methylation. International Journal of Environmental Research and Public Health. 17. PMID 33419350 DOI: 10.3390/ijerph17249552  0.394
2020 Lybrand DB, Anthony TM, Jones AD, Last RL. An Integrated Analytical Approach Reveals Trichome Acylsugar Metabolite Diversity in the Wild Tomato . Metabolites. 10. PMID 33050231 DOI: 10.3390/metabo10100401  0.628
2020 Reese KL, Rasley A, Avila JR, Jones AD, Frank M. Metabolic Profiling of Volatile Organic Compounds (VOCs) Emitted by the Pathogens Francisella tularensis and Bacillus anthracis in Liquid Culture. Scientific Reports. 10: 9333. PMID 32518249 DOI: 10.1038/S41598-020-66136-0  0.305
2020 Leong B, Hurney SM, Fiesel PD, Moghe GD, Jones AD, Last RL. Specialized metabolism in a non-model nightshade: trichome acylinositol biosynthesis. Plant Physiology. PMID 32354879 DOI: 10.1104/Pp.20.00276  0.649
2019 Jones AD, Boundy-Mills KL, Barla GF, Kumar S, Ubanwa B, Balan V. Microbial Lipid Alternatives to Plant Lipids. Methods in Molecular Biology (Clifton, N.J.). 1995: 1-32. PMID 31148119 DOI: 10.1007/978-1-4939-9484-7_1  0.3
2018 Bedewitz MA, Jones AD, D'Auria JC, Barry CS. Tropinone synthesis via an atypical polyketide synthase and P450-mediated cyclization. Nature Communications. 9: 5281. PMID 30538251 DOI: 10.1038/S41467-018-07671-3  0.338
2018 Salim V, Jones AD, DellaPenna D. Camptotheca acuminata 10-hydroxycamptothecin O-methyltransferase: an alkaloid biosynthetic enzyme coopted from flavonoid metabolism. The Plant Journal : For Cell and Molecular Biology. PMID 29681057 DOI: 10.1111/Tpj.13936  0.341
2018 Xue S, Jones AD, Sousa L, Piotrowski J, Jin M, Sarks C, Dale BE, Balan V. Water-soluble phenolic compounds produced from extractive ammonia pretreatment exerted binary inhibitory effects on yeast fermentation using synthetic hydrolysate. Plos One. 13: e0194012. PMID 29543873 DOI: 10.1371/Journal.Pone.0194012  0.331
2017 Bussy U, Chung-Davidson YW, Buchinger T, Li K, Smith SA, Jones AD, Li W. Metabolism of a sea lamprey pesticide by fish liver enzymes part A: identification and synthesis of TFM metabolites. Analytical and Bioanalytical Chemistry. PMID 29282500 DOI: 10.1007/S00216-017-0830-8  0.341
2017 Fan P, Miller AM, Liu X, Jones AD, Last RL. Evolution of a flipped pathway creates metabolic innovation in tomato trichomes through BAHD enzyme promiscuity. Nature Communications. 8: 2080. PMID 29234041 DOI: 10.1038/S41467-017-02045-7  0.662
2017 Moghe GD, Leong BJ, Hurney S, Jones AD, Last RL. Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway. Elife. 6. PMID 28853706 DOI: 10.7554/Elife.28468  0.646
2017 Mansfeld BN, Colle M, Kang Y, Jones AD, Grumet R. Transcriptomic and metabolomic analyses of cucumber fruit peels reveal a developmental increase in terpenoid glycosides associated with age-related resistance to Phytophthora capsici. Horticulture Research. 4: 17022. PMID 28580151 DOI: 10.1038/Hortres.2017.22  0.301
2017 Moghe GD, Leong BJ, Hurney SM, Jones AD. Author response: Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway Elife. DOI: 10.7554/Elife.28468.057  0.32
2017 Ghosh B, Jones AD. Profiling, characterization, and analysis of natural and synthetic acylsugars (sugar esters) Analytical Methods. 9: 892-905. DOI: 10.1039/C6Ay02944B  0.331
2017 Alameldin H, Izadi-Darbandi A, Smith SA, Balan V, Jones AD, Sticklen M. Production of Seed-Like Storage Lipids and Increase in Oil Bodies in Corn (Maize; Zea mays L.) Vegetative Biomass Industrial Crops and Products. 108: 526-534. DOI: 10.1016/J.Indcrop.2017.07.021  0.331
2017 Liu X, Enright M, Barry CS, Jones AD. Profiling, isolation and structure elucidation of specialized acylsucrose metabolites accumulating in trichomes of Petunia species Metabolomics. 13. DOI: 10.1007/S11306-017-1224-9  0.339
2016 Reese KL, Jones AD, Smith RW. Characterization of smokeless powders using multiplexed collision-induced dissociation mass spectrometry and chemometric procedures. Forensic Science International. 272: 16-27. PMID 28088709 DOI: 10.1016/J.Forsciint.2016.12.021  0.318
2016 Sadre R, Magallanes-Lundback M, Pradhan S, Salim V, Mesberg A, Jones AD, DellaPenna D. Metabolite diversity in alkaloid biosynthesis: A multi-lane (diastereomer) highway for camptothecin synthesis in Camptotheca acuminata. The Plant Cell. PMID 27432874 DOI: 10.1105/Tpc.16.00193  0.359
2016 Schilmiller AL, Gilgallon K, Ghosh B, Jones AD, Last RL. Acylsugar acylhydrolases: carboxylesterase catalyzed hydrolysis of acylsugars in tomato trichomes. Plant Physiology. PMID 26811191 DOI: 10.1104/Pp.15.01348  0.624
2015 Fan P, Miller AM, Schilmiller AL, Liu X, Ofner I, Jones AD, Zamir D, Last RL. In vitro reconstruction and analysis of evolutionary variation of the tomato acylsucrose metabolic network. Proceedings of the National Academy of Sciences of the United States of America. PMID 26715757 DOI: 10.1073/Pnas.1517930113  0.664
2015 Nault R, Fader KA, Kirby MP, Ahmed S, Matthews J, Jones AD, Lunt SY, Zacharewski TR. Pyruvate kinase isoform switching and hepatic metabolic reprogramming by the environmental contaminant 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 26582802 DOI: 10.1093/Toxsci/Kfv245  0.334
2015 Ghosh B, Jones AD. Dependence of negative-mode electrospray ionization response factors on mobile phase composition and molecular structure for newly-authenticated neutral acylsucrose metabolites. The Analyst. 140: 6522-31. PMID 26331907 DOI: 10.1039/C4An02124J  0.355
2015 Ning J, Moghe G, Leong B, Kim J, Ofner I, Wang Z, Adams C, Jones AD, Zamir D, Last RL. A feedback insensitive isopropylmalate synthase affects acylsugar composition in cultivated and wild tomato. Plant Physiology. PMID 25986128 DOI: 10.1104/Pp.15.00474  0.626
2015 Schilmiller AL, Moghe GD, Fan P, Ghosh B, Ning J, Jones AD, Last RL. Functionally divergent alleles and duplicated Loci encoding an acyltransferase contribute to acylsugar metabolite diversity in Solanum trichomes. The Plant Cell. 27: 1002-17. PMID 25862303 DOI: 10.1105/Tpc.15.00087  0.616
2015 Matsuba Y, Zi J, Jones AD, Peters RJ, Pichersky E. Biosynthesis of the diterpenoid lycosantalonol via nerylneryl diphosphate in Solanum lycopersicum. Plos One. 10: e0119302. PMID 25786135 DOI: 10.1371/Journal.Pone.0119302  0.325
2015 Ekanayaka EA, Celiz MD, Jones AD. Relative mass defect filtering of mass spectra: a path to discovery of plant specialized metabolites. Plant Physiology. 167: 1221-32. PMID 25659383 DOI: 10.1104/Pp.114.251165  0.358
2014 Wang Z, Jones AD. Profiling of stable isotope enrichment in specialized metabolites using liquid chromatography and multiplexed nonselective collision-induced dissociation. Analytical Chemistry. 86: 10600-7. PMID 25300033 DOI: 10.1021/Ac502205Y  0.356
2014 Appel HM, Maqbool SB, Raina S, Jagadeeswaran G, Acharya BR, Hanley JC, Miller KP, Hearnes L, Jones AD, Raina R, Schultz JC. Transcriptional and metabolic signatures of Arabidopsis responses to chewing damage by an insect herbivore and bacterial infection and the consequences of their interaction. Frontiers in Plant Science. 5: 441. PMID 25278943 DOI: 10.3389/Fpls.2014.00441  0.753
2014 Bedewitz MA, Góngora-Castillo E, Uebler JB, Gonzales-Vigil E, Wiegert-Rininger KE, Childs KL, Hamilton JP, Vaillancourt B, Yeo YS, Chappell J, DellaPenna D, Jones AD, Buell CR, Barry CS. A root-expressed L-phenylalanine:4-hydroxyphenylpyruvate aminotransferase is required for tropane alkaloid biosynthesis in Atropa belladonna. The Plant Cell. 26: 3745-62. PMID 25228340 DOI: 10.1105/Tpc.114.130534  0.389
2014 Kim J, Matsuba Y, Ning J, Schilmiller AL, Hammar D, Jones AD, Pichersky E, Last RL. Analysis of natural and induced variation in tomato glandular trichome flavonoids identifies a gene not present in the reference genome. The Plant Cell. 26: 3272-85. PMID 25128240 DOI: 10.1105/Tpc.114.129460  0.59
2014 Ghosh B, Westbrook TC, Jones AD. Comparative structural profiling of trichome specialized metabolites in tomato (Solanum lycopersicum) and S. habrochaites: acylsugar profiles revealed by UHPLC/MS and NMR. Metabolomics : Official Journal of the Metabolomic Society. 10: 496-507. PMID 24772058 DOI: 10.1007/S11306-013-0585-Y  0.359
2014 Kang JH, McRoberts J, Shi F, Moreno JE, Jones AD, Howe GA. The flavonoid biosynthetic enzyme chalcone isomerase modulates terpenoid production in glandular trichomes of tomato Plant Physiology. 164: 1161-1174. PMID 24424324 DOI: 10.1104/Pp.113.233395  0.351
2014 Ekanayaka EAP, Li C, Jones AD. Sesquiterpenoid glycosides from glandular trichomes of the wild tomato relative Solanum habrochaites. Phytochemistry. 98: 223-231. PMID 24333030 DOI: 10.1016/J.Phytochem.2013.11.011  0.336
2014 Li C, Wang Z, Jones AD. Chemical imaging of trichome specialized metabolites using contact printing and laser desorption/ionization mass spectrometry. Analytical and Bioanalytical Chemistry. 406: 171-82. PMID 24220760 DOI: 10.1007/S00216-013-7444-6  0.318
2013 Vismeh R, Lu F, Chundawat SP, Humpula JF, Azarpira A, Balan V, Dale BE, Ralph J, Jones AD. Profiling of diferulates (plant cell wall cross-linkers) using ultrahigh-performance liquid chromatography-tandem mass spectrometry. The Analyst. 138: 6683-92. PMID 24040649 DOI: 10.1039/C3An36709F  0.377
2013 Liu B, Vieler A, Li C, Jones AD, Benning C. Triacylglycerol profiling of microalgae Chlamydomonas reinhardtii and Nannochloropsis oceanica. Bioresource Technology. 146: 310-6. PMID 23948268 DOI: 10.1016/J.Biortech.2013.07.088  0.356
2013 Vismeh R, Humpula JF, Chundawat SP, Balan V, Dale BE, Jones AD. Profiling of soluble neutral oligosaccharides from treated biomass using solid phase extraction and LC-TOF MS. Carbohydrate Polymers. 94: 791-9. PMID 23544634 DOI: 10.1016/J.Carbpol.2013.02.005  0.333
2013 Yeo YS, Nybo SE, Chittiboyina AG, Weerasooriya AD, Wang YH, Góngora-Castillo E, Vaillancourt B, Buell CR, DellaPenna D, Celiz MD, Jones AD, Wurtele ES, Ransom N, Dudareva N, Shaaban KA, et al. Functional identification of valerena-1,10-diene synthase, a terpene synthase catalyzing a unique chemical cascade in the biosynthesis of biologically active sesquiterpenes in Valeriana officinalis. The Journal of Biological Chemistry. 288: 3163-73. PMID 23243312 DOI: 10.1074/Jbc.M112.415836  0.376
2013 Li C, Schmidt A, Pichersky E, Shi F, Jones AD. Identification of methylated flavonoid regioisomeric metabolites using enzymatic semisynthesis and liquid chromatography-tandem mass spectrometry Metabolomics. 9: 92-101. DOI: 10.1007/S11306-012-0451-3  0.302
2012 Wurtele ES, Chappell J, Jones AD, Celiz MD, Ransom N, Hur M, Rizshsky L, Crispin M, Dixon P, Liu J, P Widrlechner M, Nikolau BJ. Medicinal plants: a public resource for metabolomics and hypothesis development. Metabolites. 2: 1031-59. PMID 24957774 DOI: 10.3390/Metabo2041031  0.366
2012 Kim J, Kang K, Gonzales-Vigil E, Shi F, Jones AD, Barry CS, Last RL. Striking natural diversity in glandular trichome acylsugar composition is shaped by variation at the Acyltransferase2 locus in the wild tomato Solanum habrochaites. Plant Physiology. 160: 1854-70. PMID 23054567 DOI: 10.1104/Pp.112.204735  0.637
2012 Pham NT, Jewell WT, Morin D, Jones AD, Buckpitt AR. Characterization of model peptide adducts with reactive metabolites of naphthalene by mass spectrometry Plos One. 7. PMID 22870282 DOI: 10.1371/Journal.Pone.0042053  0.318
2012 Shafii B, Vismeh R, Beaudry R, Warner R, Jones AD. Large-scale profiling of diterpenoid glycosides from Stevia rebaudiana using ultrahigh performance liquid chromatography/tandem mass spectrometry Analytical and Bioanalytical Chemistry. 403: 2683-2690. PMID 22580424 DOI: 10.1007/S00216-012-6071-Y  0.352
2012 Gu L, Jones AD, Last RL. Rapid LC-MS/MS profiling of protein amino acids and metabolically related compounds for large-scale assessment of metabolic phenotypes. Methods in Molecular Biology (Clifton, N.J.). 828: 1-11. PMID 22125131 DOI: 10.1007/978-1-61779-445-2_1  0.625
2011 Varbanova M, Porter K, Lu F, Ralph J, Hammerschmidt R, Jones AD, Day B. Molecular and biochemical basis for stress-induced accumulation of free and bound p-coumaraldehyde in cucumber. Plant Physiology. 157: 1056-66. PMID 21940999 DOI: 10.1104/Pp.111.184358  0.303
2011 Humpula JF, Chundawat SP, Vismeh R, Jones AD, Balan V, Dale BE. Rapid quantification of major reaction products formed during thermochemical pretreatment of lignocellulosic biomass using GC-MS. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 879: 1018-22. PMID 21444255 DOI: 10.1016/J.Jchromb.2011.02.049  0.354
2011 Schmidt A, Li C, Shi F, Jones AD, Pichersky E. Polymethylated myricetin in trichomes of the wild tomato species solanum habrochaites and characterization of trichome-specific 3'/5'- and 7/4'-myricetin O-methyltransferases Plant Physiology. 155: 1999-2009. PMID 21343428 DOI: 10.1104/Pp.110.169961  0.329
2011 Sugimoto N, Jones AD, Beaudry R. Changes in Free Amino Acid Content in ‘Jonagold’ Apple Fruit as Related to Branched-chain Ester Production, Ripening, and Senescence Journal of the American Society For Horticultural Science. 136: 429-440. DOI: 10.21273/Jashs.136.6.429  0.342
2010 Mène-Saffrané L, Jones AD, DellaPenna D. Plastochromanol-8 and tocopherols are essential lipid-soluble antioxidants during seed desiccation and quiescence in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 107: 17815-20. PMID 20837525 DOI: 10.1073/Pnas.1006971107  0.318
2010 Kang JH, Liu G, Shi F, Jones AD, Beaudry RM, Howe GA. The tomato odorless-2 mutant is defective in trichome-based production of diverse specialized metabolites and broad-spectrum resistance to insect herbivores Plant Physiology. 154: 262-272. PMID 20668059 DOI: 10.1104/Pp.110.160192  0.345
2010 Li C, Hill RW, Jones AD. Determination of betaine metabolites and dimethylsulfoniopropionate in coral tissues using liquid chromatography-time-of-flight mass spectrometry and stable isotope-labeled internal standards. Journal of Chromatography. B, Analytical Technologies in the Biomedical and Life Sciences. 878: 1809-16. PMID 20627732 DOI: 10.1016/J.Jchromb.2010.05.014  0.322
2010 Kang JH, Shi F, Jones AD, Marks MD, Howe GA. Distortion of trichome morphology by the hairless mutation of tomato affects leaf surface chemistry Journal of Experimental Botany. 61: 1053-1064. PMID 20018901 DOI: 10.1093/Jxb/Erp370  0.305
2010 Gu L, Jones AD, Last RL. Broad connections in the Arabidopsis seed metabolic network revealed by metabolite profiling of an amino acid catabolism mutant. The Plant Journal : For Cell and Molecular Biology. 61: 579-90. PMID 19929878 DOI: 10.1111/J.1365-313X.2009.04083.X  0.634
2008 Chung HS, Koo AJ, Gao X, Jayanty S, Thines B, Jones AD, Howe GA. Regulation and function of Arabidopsis JASMONATE ZIM-domain genes in response to wounding and herbivory. Plant Physiology. 146: 952-64. PMID 18223147 DOI: 10.1104/Pp.107.115691  0.302
2007 Gu L, Jones AD, Last RL. LC-MS/MS assay for protein amino acids and metabolically related compounds for large-scale screening of metabolic phenotypes. Analytical Chemistry. 79: 8067-75. PMID 17918906 DOI: 10.1021/Ac070938B  0.62
2007 Last RL, Jones AD, Shachar-Hill Y. Towards the plant metabolome and beyond Nature Reviews Molecular Cell Biology. 8: 167-174. PMID 17213843 DOI: 10.1038/Nrm2098  0.625
2006 Chen H, Jones AD, Howe GA. Constitutive activation of the jasmonate signaling pathway enhances the production of secondary metabolites in tomato. Febs Letters. 580: 2540-6. PMID 16647069 DOI: 10.1016/J.Febslet.2006.03.070  0.353
2005 Boddu J, Svabek C, Ibraheem F, Jones AD, Chopra S. Characterization of a deletion allele of a sorghum Myb gene yellow seed1 showing loss of 3-deoxyflavonoids Plant Science. 169: 542-552. DOI: 10.1016/J.Plantsci.2005.05.007  0.333
2005 Manda K, Hammer E, Mikolasch A, Niedermeyer T, Dec J, Jones AD, Benesi AJ, Schauer F, Bollag J. Laccase-induced cross-coupling of 4-aminobenzoic acid with para-dihydroxylated compounds 2,5-dihydroxy-N-(2-hydroxyethyl)-benzamide and 2,5-dihydroxybenzoic acid methyl ester Journal of Molecular Catalysis B: Enzymatic. 35: 86-92. DOI: 10.1016/J.Molcatb.2005.06.001  0.307
2004 Repeta DJ, Hartman NT, John S, Jones AD, Goericke R. Structure elucidation and characterization of polychlorinated biphenyl carboxylic acids as major constituents of chromophoric dissolved organic matter in seawater. Environmental Science & Technology. 38: 5373-8. PMID 15543739 DOI: 10.1021/Es049921Q  0.303
2004 Frigaard NU, Maresca JA, Yunker CE, Jones AD, Bryant DA. Genetic manipulation of carotenoid biosynthesis in the green sulfur bacterium Chlorobium tepidum. Journal of Bacteriology. 186: 5210-20. PMID 15292122 DOI: 10.1128/Jb.186.16.5210-5220.2004  0.318
2004 Coleman CS, Stanley BA, Jones AD, Pegg AE. Spermidine/spermine-N1-acetyltransferase-2 (SSAT2) acetylates thialysine and is not involved in polyamine metabolism. The Biochemical Journal. 384: 139-48. PMID 15283699 DOI: 10.1042/Bj20040790  0.363
2004 Cicchillo RM, Iwig DF, Jones AD, Nesbitt NM, Baleanu-Gogonea C, Souder MG, Tu L, Booker SJ. Lipoyl synthase requires two equivalents of S-adenosyl-L-methionine to synthesize one equivalent of lipoic acid. Biochemistry. 43: 6378-86. PMID 15157071 DOI: 10.1021/Bi049528X  0.304
2004 Boddu J, Svabek C, Sekhon R, Gevens A, Nicholson RL, Jones AD, Pedersen JF, Gustine DL, Chopra S. Expression of a putative flavonoid 3′-hydroxylase in sorghum mesocotyls synthesizing 3-deoxyanthocyanidin phytoalexins Physiological and Molecular Plant Pathology. 65: 101-113. DOI: 10.1016/J.Pmpp.2004.11.007  0.316
2003 Manica DP, Lapos JA, Jones AD, Ewing AG. Analysis of the stability of amino acids derivatized with naphthalene-2,3-dicarboxaldehyde using high-performance liquid chromatography and mass spectrometry. Analytical Biochemistry. 322: 68-78. PMID 14705782 DOI: 10.1016/J.Ab.2003.07.002  0.365
2002 Wheelock CE, Colvin ME, Uemura I, Olmstead MM, Sanborn JR, Nakagawa Y, Jones AD, Hammock BD. Use of ab initio calculations to predict the biological potency of carboxylesterase inhibitors. Journal of Medicinal Chemistry. 45: 5576-93. PMID 12459025 DOI: 10.1021/Jm020072W  0.417
2002 Vu BC, Jones AD, Lecomte JT. Novel histidine-heme covalent linkage in a hemoglobin. Journal of the American Chemical Society. 124: 8544-5. PMID 12121092 DOI: 10.1021/Ja026569C  0.302
2001 Mester T, Ambert-Balay K, Ciofi-Baffoni S, Banci L, Jones AD, Tien M. Oxidation of a Tetrameric Nonphenolic Lignin Model Compound by Lignin Peroxidase Journal of Biological Chemistry. 276: 22985-22990. PMID 11304528 DOI: 10.1074/Jbc.M010739200  0.307
2001 Shan G, Leeman WR, Gee SJ, Sanborn JR, Jones AD, Chang DPY, Hammock BD. Highly sensitive dioxin immunoassay and its application to soil and biota samples Analytica Chimica Acta. 444: 169-178. DOI: 10.1016/S0003-2670(01)01159-X  0.39
2000 Lohse C, Jaeger LL, Staimer N, Sanborn JR, Jones AD, Langó J, Gee SJ, Hammock BD. Development of a class-selective enzyme-linked immunosorbent assay for mercapturic acids in human urine. Journal of Agricultural and Food Chemistry. 48: 5913-23. PMID 11312767 DOI: 10.1021/Jf000621B  0.419
2000 Mitchell AE, Lakritz J, Jones AD. Quantification of individual glutathione S-transferase isozymes in hepatic and pulmonary tissues of naphthalene-tolerant mice Archives of Toxicology. 74: 215-221. PMID 10959795 DOI: 10.1007/S002040000120  0.598
2000 Reddy S, Jones AD, Cross CE, Wong PS-, Vliet AVD. Inactivation of creatine kinase by S-glutathionylation of the active-site cysteine residue Biochemical Journal. 347: 821-827. DOI: 10.1042/0264-6021:3470821  0.318
1999 Mitchell AE, Jones AD, Mercer RS, Rucker RB. Characterization of pyrroloquinoline quinone amino acid derivatives by electrospray ionization mass spectrometry and detection in human milk. Analytical Biochemistry. 269: 317-25. PMID 10222004 DOI: 10.1006/Abio.1999.4039  0.599
1998 Moskowitz H, Herrmann R, Jones AD, Hammock BD. A depressant insect-selective toxin analog from the venom of the scorpion Leiurus quinquestriatus hebraeus--purification and structure/function characterization. European Journal of Biochemistry / Febs. 254: 44-9. PMID 9652392 DOI: 10.1046/J.1432-1327.1998.2540044.X  0.418
1998 Nakagawa Y, Sadilek M, Lehmberg E, Herrmann R, Herrmann R, Moskowitz H, Lee YM, Thomas BA, Shimizu R, Kuroda M, Jones AD, Hammock BD. Rapid purification and molecular modeling of AaIT peptides from venom of Androctonus australis. Archives of Insect Biochemistry and Physiology. 38: 53-65. PMID 9627406 DOI: 10.1002/(Sici)1520-6327(1998)38:2<53::Aid-Arch1>3.0.Co;2-W  0.437
1998 Pinot F, Caldas ED, Schmidt C, Gilchrist DG, Jones AD, Winter CK, Hammock BD. Characterization of epoxide hydrolase activity in Alternaria alternata f. sp. lycopersici. Possible involvement in toxin production. Mycopathologia. 140: 51-8. PMID 9608724 DOI: 10.1023/A:1006829330490  0.325
1998 Mitchell AE, Zheng J, Hammock BD, Lo Bello M, Jones AD. Structural and functional consequences of haloenol lactone inactivation of murine and human glutathione S-transferase Biochemistry. 37: 6752-6759. PMID 9578559 DOI: 10.1021/Bi971846R  0.67
1998 Jaeger LL, Jones AD, Hammock BD. Development of an enzyme-linked immunosorbent assay for atrazine mercapturic acid in human urine. Chemical Research in Toxicology. 11: 342-52. PMID 9548805 DOI: 10.1021/Tx9701844  0.371
1998 Zheng J, Wurz GT, Cadman TB, Degregorio MW, Jones AD, Hammock BD. Haloenol lactone: a new synergist of chemotherapy in vitro. Biochemical and Biophysical Research Communications. 241: 13-7. PMID 9405226 DOI: 10.1006/Bbrc.1997.7762  0.393
1998 Zheng J, Cho M, Jones AD, Hammock BD. Evidence of quinone metabolites of naphthalene covalently bound to sulfur nucleophiles of proteins of murine Clara cells after exposure to naphthalene. Chemical Research in Toxicology. 10: 1008-14. PMID 9305583 DOI: 10.1021/Tx970061J  0.334
1998 Caldas ED, Sadilkova K, Ward BL, Jones AD, Winter CK, Gilchrist DG. Biosynthetic Studies of Fumonisin B1 and AAL Toxins Journal of Agricultural and Food Chemistry. 46: 4734-4743. DOI: 10.1021/Jf980210J  0.3
1998 Sanborn JR, Gee SJ, Gilman SD, Sugawara Y, Jones AD, Rogers J, Szurdoki F, Stanker LH, Stoutamire DW, Hammock BD. Hapten Synthesis and Antibody Development for Polychlorinated Dibenzo-p-dioxin Immunoassays Journal of Agricultural and Food Chemistry. 46: 2407-2416. DOI: 10.1021/Jf970716M  0.398
1997 Mitchell AE, Morin D, Lakritz J, Jones AD. Quantitative profiling of tissue- and gender-related expression of glutathione S-transferase isoenzymes in the mouse Biochemical Journal. 325: 207-216. PMID 9224648 DOI: 10.1042/Bj3250207  0.585
1997 Nakagawa Y, Lee YM, Lehmberg E, Herrmann R, Herrmann R, Moskowitz H, Jones AD, Hammock BD. Anti-insect toxin 5 (AaIT5) from Androctonus australis. European Journal of Biochemistry / Febs. 246: 496-501. PMID 9208943 DOI: 10.1111/J.1432-1033.1997.T01-1-00496.X  0.427
1996 Bruenner BA, Jones AD, German JB. Simultaneous determination of multiple aldehydes in biological tissues and fluids using gas chromatography/stable isotope dilution mass spectrometry Analytical Biochemistry. 241: 212-219. PMID 8921190 DOI: 10.1006/Abio.1996.0402  0.331
1996 Villalobos SA, Anderson MJ, Denison MS, Hinton DE, Tullis K, Kennedy IM, Jones AD, Chang DP, Yang G, Kelly P. Dioxinlike properties of a trichloroethylene combustion-generated aerosol. Environmental Health Perspectives. 104: 734-43. PMID 8841759 DOI: 10.1289/Ehp.96104734  0.314
1996 Szurdoki F, Jaeger L, Harris A, Kido H, Wengatz I, Goodrow MH, Székács A, Wortberg M, Zheng J, Stoutamire DW, Sanborn JR, Gilman SD, Jones AD, Gee SJ, Choudary PV, et al. Rapid assays for environmental and biological monitoring. Journal of Environmental Science and Health. Part. B, Pesticides, Food Contaminants, and Agricultural Wastes. 31: 451-8. PMID 8642182 DOI: 10.1080/03601239609373006  0.368
1995 Mitchell AE, Morin D, Lamé MW, Jones AD. Purification, mass spectrometric characterization, and covalent modification of murine glutathione S-transferases Chemical Research in Toxicology. 8: 1054-1062. PMID 8605288 DOI: 10.1021/Tx00050A009  0.624
1995 Pinot F, Grant DF, Beetham JK, Parker AG, Borhan B, Landt S, Jones AD, Hammock BD. Molecular and biochemical evidence for the involvement of the Asp-333-His-523 pair in the catalytic mechanism of soluble epoxide hydrolase. The Journal of Biological Chemistry. 270: 7968-74. PMID 7713895 DOI: 10.1074/Jbc.270.14.7968  0.375
1995 Borhan B, Jones AD, Pinot F, Grant DF, Kurth MJ, Hammock BD. Mechanism of soluble epoxide hydrolase. Formation of an alpha-hydroxy ester-enzyme intermediate through Asp-333. The Journal of Biological Chemistry. 270: 26923-30. PMID 7592938 DOI: 10.1074/Jbc.270.45.26923  0.479
1995 Bruenner BA, Jones AD, German JB. Direct Characterization of Protein Adducts of the Lipid Peroxidation Product 4-Hydroxy-2-nonenal Using Electrospray Mass Spectrometry Chemical Research in Toxicology. 8: 552-559. PMID 7548735 DOI: 10.1021/Tx00046A009  0.319
1994 Lucas AD, Bekheit HKM, Goodrow MH, Jones AD, Kullman S, Matsumura F, Woodrow JE, Seiber JN, Hammock BD. Development of antibodies against hydroxyatrazine and hydroxysimazine: application to environmental samples. [Erratum to document cited in CA119:153461] Journal of Agricultural and Food Chemistry. 42: 1256-1256. DOI: 10.1021/Jf00041A040  0.336
1994 Blankenship A, Chang DPY, Jones AD, Kelly PB, Kennedy IM, Matsumura F, Pasek R, Yang GS. Toxic combustion by-products from the incineration of chlorinated hydrocarbons and plastics Chemosphere. 28: 183-196. DOI: 10.1016/0045-6535(94)90212-7  0.303
1993 Lucas AD, Jones AD, Goodrow MH, Saiz SG, Blewett C, Seiber JN, Hammock BD. Determination of atrazine metabolites in human urine: development of a biomarker of exposure. Chemical Research in Toxicology. 6: 107-16. PMID 8448340 DOI: 10.1021/Tx00031A017  0.588
1993 Jones AD, Winter CK, Buonarati MH, Segall HJ. Analysis of mercapturic acid conjugates of xenobiotic compounds using negative ionization and tandem mass spectrometry. Journal of Mass Spectrometry. 22: 68-76. PMID 8431504 DOI: 10.1002/Bms.1200220109  0.348
1993 Lucas AD, Bekheit HKM, Goodrow MH, Jones AD, Kullman S, Matsumura F, Woodrow JE, Seiber JN, Hammock BD. Development of antibodies against hydroxyatrazine and hydroxysimazine: Application to environmental samples Journal of Agricultural and Food Chemistry. 41: 1523-1529. DOI: 10.1021/Jf00033A032  0.413
1992 Halarnkar PP, Nourooz-Zadeh J, Kuwano E, Jones AD, Hammock BD. Formation of cyclic products from the diepoxide of long-chain fatty esters by cytosolic epoxide hydrolase. Archives of Biochemistry and Biophysics. 294: 586-93. PMID 1567214 DOI: 10.1016/0003-9861(92)90729-G  0.496
1990 Estep JE, Lamé MW, Jones AD, Segall HJ. N-acetylcysteine-conjugated pyrrole identified in rat urine following administration of two pyrrolizidine alkaloids, monocrotaline and senecionine. Toxicology Letters. 54: 61-69. PMID 2123045 DOI: 10.1016/0378-4274(90)90056-R  0.32
1990 Lamé MW, Morin D, Jones AD, Segall HJ, Wilson DW. Isolation and identification of a pyrrolic glutathione conjugate metabolite of the pyrrolizidine alkaloid monocrotaline. Toxicology Letters. 51: 321-9. PMID 2111054 DOI: 10.1016/0378-4274(90)90075-W  0.34
1988 Fujino DW, Nissen SJ, Jones AD, Burger DW, Bradford KJ. Quantification of Indole-3-Acetic Acid in Dark-Grown Seedlings of the Diageotropica and Epinastic Mutants of Tomato (Lycopersicon esculentum Mill.). Plant Physiology. 88: 780-4. PMID 16666383 DOI: 10.1104/Pp.88.3.780  0.35
1988 Miller CC, McCreedy CA, Jones AD, Ziboh VA. Oxidative metabolism of dihomogammalinolenic acid by guinea pig epidermis: Evidence of generation of anti-inflammatory products Prostaglandins. 35: 917-938. PMID 3141974 DOI: 10.1016/0090-6980(88)90116-5  0.309
1986 Shadle LJ, Jones AD, Deno NC, Given PH. Multifacetted study of a Cretaceous coal with algal affinities. 3. Asphaltenes from liquefaction and a comparison with some hydrogen-rich Texas coalsa a For papers 1 and 2 of this series, see Refs. 2 and 3. Fuel. 65: 611-620. DOI: 10.1016/0016-2361(86)90353-4  0.398
1985 Deno NC, Jones AD, Owen DO, Weinschenk JI. Arylmethoxyl groups in coal macerals Fuel. 64: 1286-1290. DOI: 10.1016/0016-2361(85)90189-9  0.453
1982 Deno NC, Jones AD, Koch CC, Minard RD, Potter T, Sherrard RS, Stroh JG, Yevak RJ. Aryl-alkyl groups in coals Fuel. 61: 490-492. DOI: 10.1016/0016-2361(82)90168-5  0.419
1981 Deno NC, Curry KW, Jones AD, Keegan KR, Rakitsky WG, Richter CA, Minard RD. Linear alkane chains in coals Fuel. 60: 210-212. DOI: 10.1016/0016-2361(81)90181-2  0.459
1980 Deno NC, Greigger BA, Jones AD, Rakitsky WG, Whitehurst DD, Mitchell TO. STRUCTURAL CHANGES OCCURRING IN COAL LIQUEFACTION. Fuel. 59: 701-703. DOI: 10.1016/0016-2361(80)90023-X  0.458
1980 Deno NC, Greigger BA, Jones AD, Rakitsky WG, Smith KA, Minard RD. CHEMICAL STRUCTURE OF WYODAK COAL. Fuel. 59: 699-700. DOI: 10.1016/0016-2361(80)90022-8  0.436
1980 Deno NC, Curry KW, Greigger BA, Jones AD, Rakitsky WG, Smith KA, Wagner K, Minard RD. DIHYDROAROMATIC STRUCTURE OF ILLINOIS NO. 6 MONTEREY COAL. Fuel. 59: 694-698. DOI: 10.1016/0016-2361(80)90021-6  0.487
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