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Michael Denker - Publications

Affiliations: 
RIKEN Brain Science Institute, Wakō-shi, Saitama-ken, Japan 
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Köhler CA, Ulianych D, Grün S, Decker S, Denker M. Facilitating the sharing of electrophysiology data analysis results through in-depth provenance capture. Eneuro. PMID 38777610 DOI: 10.1523/ENEURO.0476-23.2024  0.585
2024 Gutzen R, De Bonis G, De Luca C, Pastorelli E, Capone C, Allegra Mascaro AL, Resta F, Manasanch A, Pavone FS, Sanchez-Vives MV, Mattia M, Grün S, Paolucci PS, Denker M. A modular and adaptable analysis pipeline to compare slow cerebral rhythms across heterogeneous datasets. Cell Reports Methods. 100681. PMID 38183979 DOI: 10.1016/j.crmeth.2023.100681  0.539
2023 Klingner CM, Denker M, Grün S, Hanke M, Oeltze-Jafra S, Ohl FW, Radny J, Rotter S, Scherberger H, Stein A, Wachtler T, Witte OW, Ritter P. Research Data Management and Data Sharing for Reproducible Research - Results of a Community Survey of the German National Research Data Infrastructure Initiative Neuroscience. Eneuro. PMID 36750361 DOI: 10.1523/ENEURO.0215-22.2023  0.54
2022 Gutzen R, Grün S, Denker M. Evaluating the statistical similarity of neural network activity and connectivity via eigenvector angles. Bio Systems. 104813. PMID 36460172 DOI: 10.1016/j.biosystems.2022.104813  0.566
2019 Sprenger J, Zehl L, Pick J, Sonntag M, Grewe J, Wachtler T, Grün S, Denker M. odMLtables: A User-Friendly Approach for Managing Metadata of Neurophysiological Experiments. Frontiers in Neuroinformatics. 13: 62. PMID 31611781 DOI: 10.3389/Fninf.2019.00062  0.571
2019 Sukiban J, Voges N, Dembek TA, Pauli R, Visser-Vandewalle V, Denker M, Weber I, Timmermann L, Grün S. Evaluation of Spike Sorting Algorithms: Application to Human Subthalamic Nucleus Recordings and Simulations. Neuroscience. 414: 168-185. PMID 31299347 DOI: 10.1016/J.Neuroscience.2019.07.005  0.604
2018 Gutzen R, von Papen M, Trensch G, Quaglio P, Grün S, Denker M. Reproducible Neural Network Simulations: Statistical Methods for Model Validation on the Level of Network Activity Data. Frontiers in Neuroinformatics. 12: 90. PMID 30618696 DOI: 10.3389/Fninf.2018.00090  0.591
2018 Trensch G, Gutzen R, Blundell I, Denker M, Morrison A. Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data. Frontiers in Neuroinformatics. 12: 81. PMID 30534066 DOI: 10.3389/Fninf.2018.00081  0.362
2018 Brochier T, Zehl L, Hao Y, Duret M, Sprenger J, Denker M, Grün S, Riehle A. Massively parallel recordings in macaque motor cortex during an instructed delayed reach-to-grasp task. Scientific Data. 5: 180055. PMID 29633986 DOI: 10.1038/Sdata.2018.55  0.612
2018 Denker M, Zehl L, Kilavik BE, Diesmann M, Brochier T, Riehle A, Grün S. LFP beta amplitude is linked to mesoscopic spatio-temporal phase patterns. Scientific Reports. 8: 5200. PMID 29581430 DOI: 10.1038/S41598-018-22990-7  0.591
2018 Bouchard KE, Aimone JB, Chun M, Dean T, Denker M, Diesmann M, Donofrio DD, Frank LM, Kasthuri N, Koch C, Rubel O, Simon HD, Sommer FT, Prabhat. International Neuroscience Initiatives through the Lens of High-Performance Computing Ieee Computer. 51: 50-59. DOI: 10.1109/Mc.2018.2141039  0.353
2017 Rubchinsky LL, Ahn S, Klijn W, Cumming B, Yates S, Karakasis V, Peyser A, Woodman M, Diaz-Pier S, Deraeve J, Vassena E, Alexander W, Beeman D, Kudela P, Boatman-Reich D, ... ... Denker M, et al. 26th Annual Computational Neuroscience Meeting (CNS*2017): Part 2 Bmc Neuroscience. 18. DOI: 10.1186/S12868-017-0371-2  0.531
2016 Bouchard KE, Aimone JB, Chun M, Dean T, Denker M, Diesmann M, Donofrio DD, Frank LM, Kasthuri N, Koch C, Ruebel O, Simon HD, Sommer FT, Prabhat. High-Performance Computing in Neuroscience for Data-Driven Discovery, Integration, and Dissemination. Neuron. 92: 628-631. PMID 27810006 DOI: 10.1016/J.Neuron.2016.10.035  0.316
2016 Torre E, Quaglio P, Denker M, Brochier T, Riehle A, Grün S. Synchronous Spike Patterns in Macaque Motor Cortex during an Instructed-Delay Reach-to-Grasp Task. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 36: 8329-40. PMID 27511007 DOI: 10.1523/Jneurosci.4375-15.2016  0.664
2016 Zehl L, Jaillet F, Stoewer A, Grewe J, Sobolev A, Wachtler T, Brochier TG, Riehle A, Denker M, Grün S. Handling Metadata in a Neurophysiology Laboratory. Frontiers in Neuroinformatics. 10: 26. PMID 27486397 DOI: 10.3389/Fninf.2016.00026  0.618
2016 Torre E, Canova C, Denker M, Gerstein G, Helias M, Grün S. ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains. Plos Computational Biology. 12: e1004939. PMID 27420734 DOI: 10.1371/Journal.Pcbi.1004939  0.649
2014 Cichon NB, Denker M, Grün S, Hanganu-Opatz IL. Unsupervised classification of neocortical activity patterns in neonatal and pre-juvenile rodents. Frontiers in Neural Circuits. 8: 50. PMID 24904296 DOI: 10.3389/Fncir.2014.00050  0.618
2013 Torre E, Picado-Muiño D, Denker M, Borgelt C, Grün S. Statistical evaluation of synchronous spike patterns extracted by frequent item set mining. Frontiers in Computational Neuroscience. 7: 132. PMID 24167487 DOI: 10.3389/Fncom.2013.00132  0.639
2013 Denker M, Riehle A, Diesmann M, Grün S. Relating excess spike synchrony to LFP-locked firing rates modulations Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P150  0.662
2012 Denker M, Zehl L, Brochier T, Riehle A, Grün S. Comparing the spatio-temporal organization of joint spiking and local field potential oscillations in motor cortex Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-P127  0.664
2011 Denker M, Roux S, Lindén H, Diesmann M, Riehle A, Grün S. The local field potential reflects surplus spike synchrony. Cerebral Cortex (New York, N.Y. : 1991). 21: 2681-95. PMID 21508303 DOI: 10.1093/Cercor/Bhr040  0.664
2011 Denker M, Davison A, Diesmann M, Grün S. Towards guiding principles in workflow design to facilitate collaborative projects involving massively parallel electrophysiological data Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P131  0.62
2010 Denker M, Riehle A, Diesmann M, Grün S. Estimating the contribution of assembly activity to cortical dynamics from spike and population measures. Journal of Computational Neuroscience. 29: 599-613. PMID 20480218 DOI: 10.1186/1471-2202-10-S1-P231  0.662
2010 Denker M, Finke R, Schaupp F, Grün S, Menzel R. Neural correlates of odor learning in the honeybee antennal lobe. The European Journal of Neuroscience. 31: 119-33. PMID 20104653 DOI: 10.1111/J.1460-9568.2009.07046.X  0.58
2010 Denker M, Riehle A, Diesmann M, Grün S. Phase locking between excess spike synchrony and LFP is independent of rate covariation Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P4  0.677
2010 Denker M, Riehle A, Diesmann M, Grün S. Distinguishing the effects of firing rate co-modulation and excess spike synchrony on the spike–LFP relationship Neuroscience Research. 68: e438. DOI: 10.1016/J.Neures.2010.07.1941  0.602
2009 Sharott A, Moll CK, Engler G, Denker M, Grün S, Engel AK. Different subtypes of striatal neurons are selectively modulated by cortical oscillations. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 4571-85. PMID 19357282 DOI: 10.1523/Jneurosci.5097-08.2009  0.649
2009 Lindén H, Pettersen KH, Tetzlaff T, Potjans T, Denker M, Diesmann M, Grün S, Einevoll GT. Estimating the spatial range of local field potentials in a cortical population model Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P224  0.551
2007 Denker M, Roux S, Timme M, Riehle A, Grün S. Phase synchronization between LFP and spiking activity in motor cortex during movement preparation Neurocomputing. 70: 2096-2101. DOI: 10.1016/J.Neucom.2006.10.088  0.64
2004 Denker M, Timme M, Diesmann M, Wolf F, Geisel T. Breaking synchrony by heterogeneity in complex networks. Physical Review Letters. 92: 074103. PMID 14995855 DOI: 10.1103/Physrevlett.92.074103  0.356
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