Reuben R. Shamir, Ph.D. - Publications

Affiliations: 
Case Western Reserve University, Cleveland Heights, OH, United States 

15/190 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Kim J, Duchin Y, Shamir RR, Patriat R, Vitek J, Harel N, Sapiro G. Automatic localization of the subthalamic nucleus on patient-specific clinical MRI by incorporating 7 T MRI and machine learning: Application in deep brain stimulation. Human Brain Mapping. PMID 30379376 DOI: 10.1002/Hbm.24404  0.568
2018 Duchin Y, Shamir RR, Patriat R, Kim J, Vitek JL, Sapiro G, Harel N. Patient-specific anatomical model for deep brain stimulation based on 7 Tesla MRI. Plos One. 13: e0201469. PMID 30133472 DOI: 10.1371/Journal.Pone.0201469  0.581
2018 Shamir RR, Duchin Y, Kim J, Patriat R, Marmor O, Bergman H, Vitek JL, Sapiro G, Bick A, Eliahou R, Eitan R, Israel Z, Harel N. Microelectrode Recordings Validate the Clinical Visualization of Subthalamic-Nucleus Based on 7T Magnetic Resonance Imaging and Machine Learning for Deep Brain Stimulation Surgery. Neurosurgery. PMID 29800386 DOI: 10.1093/Neuros/Nyy212  0.599
2015 Shamir RR, Dolber T, Noecker AM, Walter BL, McIntyre CC. Machine Learning Approach to Optimizing Combined Stimulation and Medication Therapies for Parkinson's Disease. Brain Stimulation. PMID 26140956 DOI: 10.1016/J.Brs.2015.06.003  0.612
2015 McIntyre CC, Chaturvedi A, Shamir RR, Lempka SF. Engineering the next generation of clinical deep brain stimulation technology. Brain Stimulation. 8: 21-6. PMID 25161150 DOI: 10.1016/J.Brs.2014.07.039  0.667
2014 Shamir RR, Dolbert T, Noecker AM, Frankemolle AM, Walter BL, McIntyre CC. A method for predicting the outcomes of combined pharmacologic and deep brain stimulation therapy for Parkinson's disease. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 17: 188-95. PMID 25485378 DOI: 10.1007/978-3-319-10470-6_24  0.592
2014 Shamir RR, Noecker A, McIntyre CC. Deep Brain Stimulation Frontiers For Young Minds. 2. DOI: 10.3389/Frym.2014.00012  0.577
2013 Moshel S, Shamir RR, Raz A, de Noriega FR, Eitan R, Bergman H, Israel Z. Subthalamic nucleus long-range synchronization-an independent hallmark of human Parkinson's disease. Frontiers in Systems Neuroscience. 7: 79. PMID 24312018 DOI: 10.3389/Fnsys.2013.00079  0.367
2013 Eitan R, Shamir RR, Linetsky E, Rosenbluh O, Moshel S, Ben-Hur T, Bergman H, Israel Z. Asymmetric right/left encoding of emotions in the human subthalamic nucleus. Frontiers in Systems Neuroscience. 7: 69. PMID 24194703 DOI: 10.3389/Fnsys.2013.00069  0.347
2012 Shamir RR, Zaidel A, Joskowicz L, Bergman H, Israel Z. Microelectrode recording duration and spatial density constraints for automatic targeting of the subthalamic nucleus. Stereotactic and Functional Neurosurgery. 90: 325-34. PMID 22854414 DOI: 10.1159/000338252  0.353
2012 Shamir RR, Joskowicz L, Tamir I, Dabool E, Pertman L, Ben-Ami A, Shoshan Y. Reduced risk trajectory planning in image-guided keyhole neurosurgery. Medical Physics. 39: 2885-95. PMID 22559661 DOI: 10.1118/1.4704643  0.302
2012 Shamir RR, Joskowicz L, Shoshan Y. Fiducial optimization for minimal target registration error in image-guided neurosurgery. Ieee Transactions On Medical Imaging. 31: 725-37. PMID 22156977 DOI: 10.1109/Tmi.2011.2175939  0.347
2011 Shamir RR, Joskowicz L. Geometrical analysis of registration errors in point-based rigid-body registration using invariants. Medical Image Analysis. 15: 85-95. PMID 20800534 DOI: 10.1016/J.Media.2010.07.010  0.311
2009 Shamir RR, Freiman M, Joskowicz L, Spektor S, Shoshan Y. Surface-based facial scan registration in neuronavigation procedures: a clinical study. Journal of Neurosurgery. 111: 1201-6. PMID 19392604 DOI: 10.3171/2009.3.Jns081457  0.326
2009 Shamir RR, Joskowicz L, Shoshan Y. Optimal landmarks selection and fiducial marker placement for minimal target registration error in image-guided neurosurgery Proceedings of Spie. 7261. DOI: 10.1117/12.810897  0.341
Low-probability matches (unlikely to be authored by this person)
2006 Joskowicz L, Shamir R, Freiman M, Shoham M, Zehavi E, Umansky F, Shoshan Y. Image-guided system with miniature robot for precise positioning and targeting in keyhole neurosurgery. Computer Aided Surgery : Official Journal of the International Society For Computer Aided Surgery. 11: 181-93. PMID 17038306 DOI: 10.3109/10929080600909351  0.299
2010 Shamir RR, Joskowicz L, Antiga L, Foroni RI, Shoshan Y. Trajectory planning method for reduced patient risk in image-guided neurosurgery: concept and preliminary results Proceedings of Spie. 7625. DOI: 10.1117/12.843991  0.296
2009 Shamir RR, Joskowicz L. Worst-case analysis of target localization errors in fiducial-based rigid body registration Proceedings of Spie. 7259: 725938. DOI: 10.1117/12.811038  0.288
2011 Shamir RR, Joskowicz L, Spektor S, Shoshan Y. Target and trajectory clinical application accuracy in neuronavigation. Neurosurgery. 68: 95-101; discussion 1. PMID 21206305 DOI: 10.1227/Neu.0B013E31820828D9  0.268
2016 Shamir RR, Friedman Y, Joskowicz L, Mimouni M, Blumenthal EZ. Comparison of Snellen and Early Treatment Diabetic Retinopathy Study charts using a computer simulation. International Journal of Ophthalmology. 9: 119-23. PMID 26949621 DOI: 10.18240/Ijo.2016.01.20  0.254
2016 Shamir RR, Friedman YG, Joskowicz L, Mimouni M, Blumenthal EZ. The influence of varying the number of characters per row on the accuracy and reproducibility of the ETDRS visual acuity chart. Graefe's Archive For Clinical and Experimental Ophthalmology = Albrecht Von Graefes Archiv Fur Klinische Und Experimentelle Ophthalmologie. PMID 26743750 DOI: 10.1007/S00417-015-3252-3  0.24
2019 Mimouni M, Shamir RR, Cohen AD, El-Yaniv R, Cohen MJ, Joskowicz L, Blumenthal EZ. A Comparison of Different Scoring Terminations Rules for Visual Acuity Testing: From a Computer Simulation to a Clinical Study. Current Eye Research. PMID 30829080 DOI: 10.1080/02713683.2019.1589524  0.232
2016 Shamir RR, Friedman YG, Joskowicz L, Mimouni M, Blumenthal EZ. Reply to: Accuracy and reproducibility of the ETDRS visual acuity chart: methodological issues. Graefe's Archive For Clinical and Experimental Ophthalmology = Albrecht Von Graefes Archiv Fur Klinische Und Experimentelle Ophthalmologie. PMID 27364117 DOI: 10.1007/S00417-016-3421-Z  0.217
2015 Schechter A, Griffiths C, Gana JC, Shaoul R, Shamir R, Shteyer E, Bdolah-Abram T, Ledder O, Turner D. Early endoscopic, laboratory and clinical predictors of poor disease course in paediatric ulcerative colitis. Gut. 64: 580-8. PMID 24848266 DOI: 10.1136/gutjnl-2014-306999  0.216
2015 Karas J, Ashkenazi S, Guarino A, Vecchio AL, Shamir R, Vandenplas Y, Szajewska H. A core outcome set for clinical trials in acute diarrhoea Archives of Disease in Childhood. 100: 359-363. PMID 25414251 DOI: 10.1136/Archdischild-2014-307403  0.205
2009 Shamir RR, Joskowicz L, Spektor S, Shoshan Y. Localization and registration accuracy in image guided neurosurgery: a clinical study. International Journal of Computer Assisted Radiology and Surgery. 4: 45-52. PMID 20033601 DOI: 10.1007/s11548-008-0268-8  0.198
2022 Holtzman Gazit M, Faran R, Stepovoy K, Peles O, Shamir RR. Post-operative glioblastoma multiforme segmentation with uncertainty estimation. Frontiers in Human Neuroscience. 16: 932441. PMID 36405078 DOI: 10.3389/fnhum.2022.932441  0.17
2016 Karas J, Ashkenazi S, Guarino A, Lo Vecchio A, Shamir R, Vandenplas Y, Szajewska H. Developing a core outcome measurement set for clinical trials in acute diarrhoea Acta Paediatrica, International Journal of Paediatrics. DOI: 10.1111/apa.13349  0.162
2023 Abutbul A, Mumblat H, Porat Y, Friedman N, Atari N, Sharabi S, Nama A, Mugahed W, Kessler A, Kolben Y, Shamir RR, Manzur D, Farber O, Bosch L, Lavy-Shahaf G, et al. Tumor Treating Fields (TTFields) demonstrate antiviral functions , and safety for application to COVID-19 patients in a pilot clinical study. Frontiers in Microbiology. 14: 1296558. PMID 38094629 DOI: 10.3389/fmicb.2023.1296558  0.147
2023 Shamir RR, Joskowicz L, Bergman H. Editorial: Image-based planning of electric neurological treatments. Frontiers in Human Neuroscience. 16: 1089818. PMID 36704092 DOI: 10.3389/fnhum.2022.1089818  0.146
2015 Koletzko B, Fewtrell M, Gibson R, van Goudoever JB, Hernell O, Shamir R, Szajewska H. Core data necessary for reporting clinical trials on nutrition in infancy. Annals of Nutrition & Metabolism. 66: 31-5. PMID 25531862 DOI: 10.1159/000365766  0.131
2011 Marom L, Ulitsky I, Cabilly Y, Shamir R, Elroy-Stein O. A point mutation in translation initiation factor eIF2B leads to function- and time-specific changes in brain gene expression Plos One. 6. PMID 22073122 DOI: 10.1371/journal.pone.0026992  0.13
2013 Shamir R, St James-Roberts I, Di Lorenzo C, Burns AJ, Thapar N, Indrio F, Riezzo G, Raimondi F, Di Mauro A, Francavilla R, Leuchter RH, Darque A, Hüppi PS, Heine RG, Bellaïche M, et al. Infant crying, colic, and gastrointestinal discomfort in early childhood: a review of the evidence and most plausible mechanisms. Journal of Pediatric Gastroenterology and Nutrition. 57: S1-45. PMID 24356023 DOI: 10.1097/Mpg.0B013E3182A154Ff  0.128
2014 Barnea L, Mozer-Glassberg Y, Hojsak I, Hartman C, Shamir R. Pediatric celiac disease patients who are lost to follow-up have a poorly controlled disease Digestion. 90: 248-253. PMID 25531121 DOI: 10.1159/000368395  0.126
2013 Assa A, Hartman C, Weiss B, Broide E, Rosenbach Y, Zevit N, Bujanover Y, Shamir R. Long-term outcome of tumor necrosis factor alpha antagonist's treatment in pediatric Crohn's disease. Journal of Crohn's & Colitis. 7: 369-76. PMID 22483567 DOI: 10.1016/j.crohns.2012.03.006  0.126
2015 Hartman C, Shamir R. Intravenous lipid emulsions in term infants: Impact on laboratory and clinical outcomes and long-term consequences World Review of Nutrition and Dietetics. 112: 81-89. DOI: 10.1159/000365493  0.12
2012 Koletzko B, Szajewska H, Ashwell M, Shamir R, Aggett P, Baerlocher K, Noakes P, Braegger C, Calder P, Campoy Folgoso C, Colomb V, Decsi T, Domellöf M, Dupont C, Fewtrell M, et al. Documentation of functional and clinical effects of infant nutrition: Setting the scene for COMMENT Annals of Nutrition and Metabolism. 60: 222-232. PMID 22677876 DOI: 10.1159/000337681  0.114
2013 Shamir RR, Eitan R, Sheffer S, Marmor-Levin O, Valsky D, Moshel S, Zaidel A, Bergman H, Israel Z. Intra-operative identification of the subthalamic nucleus motor zone using goniometers Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7915: 21-29. DOI: 10.1007/978-3-642-38568-1_3  0.114
2011 Shamir RR, Horn M, Blum T, Mehrkens J, Shoshan Y, Joskowicz L, Navab N. Trajectory planning with Augmented Reality for improved risk assessment in image-guided keyhole neurosurgery Proceedings - International Symposium On Biomedical Imaging. 1873-1876. DOI: 10.1109/ISBI.2011.5872773  0.109
2010 Shamir RR, Tamir I, Dabool E, Joskowicz L, Shoshan Y. A method for planning safe trajectories in image-guided keyhole neurosurgery. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 13: 457-64. PMID 20879432 DOI: 10.1007/978-3-642-15711-0_57  0.109
2015 Yanai H, Lichtenstein L, Assa A, Mazor Y, Weiss B, Levine A, Ron Y, Kopylov U, Bujanover Y, Rosenbach Y, Ungar B, Eliakim R, Chowers Y, Shamir R, Fraser G, et al. Levels of drug and antidrug antibodies are associated with outcome of interventions after loss of response to infliximab or adalimumab. Clinical Gastroenterology and Hepatology : the Official Clinical Practice Journal of the American Gastroenterological Association. 13: 522-530.e2. PMID 25066837 DOI: 10.1016/j.cgh.2014.07.029  0.104
2012 Husby S, Koletzko S, Korponay-Szabó IR, Mearin ML, Phillips A, Shamir R, Troncone R, Giersiepen K, Branski D, Catassi C, Lelgeman M, Mäki M, Ribes-Koninckx C, Ventura A, Zimmer KP. European society for pediatric gastroenterology, hepatology, and nutrition guidelines for the diagnosis of coeliac disease Revista Portuguesa De Imunoalergologia. 20: 227-228. DOI: 10.1097/MPG.0b013e31821a23d0  0.103
2016 Vandenplas Y, Dupont C, Eigenmann P, Host A, Kuitunen M, Ribes-Koninckx C, Shah N, Shamir R, Staiano A, Szajewska H, Von Berg A. A workshop report on the development of the Cow's Milk-related Symptom Score awareness tool for young children Acta Paediatrica, International Journal of Paediatrics. 104: 334-339. PMID 25557474 DOI: 10.1111/apa.12902  0.098
2015 Eales J, Lenoir-Wijnkoop I, King S, Wood H, Kok FJ, Shamir R, Prentice A, Edwards M, Glanville J, Atkinson RL. Is consuming yoghurt associated with weight management outcomes? Results from a systematic review. International Journal of Obesity (2005). PMID 26443336 DOI: 10.1038/ijo.2015.202  0.096
2011 Mozer-Glassberg Y, Hojsak I, Zevit N, Shapiro R, Shamir R. Pruritus responsive to naltrexone in a patient with cholestatic liver disease Israel Medical Association Journal. 13: 111-112. PMID 21443039  0.094
2016 Domingo A, Amar D, Grütz K, Lee LV, Rosales R, Brüggemann N, Jamora RD, Cutiongco-Dela Paz E, Rolfs A, Dressler D, Walter U, Krainc D, Lohmann K, Shamir R, Klein C, et al. Evidence of TAF1 dysfunction in peripheral models of X-linked dystonia-parkinsonism Cellular and Molecular Life Sciences. 1-11. DOI: 10.1007/s00018-016-2159-4  0.092
2014 Zevit N, Shamir R. Diagnosis of celiac disease: Where are we heading after the ESPGHAN 2012 guidelines? Journal of Pediatric Gastroenterology and Nutrition. 59: S13-S15. PMID 24979193 DOI: 10.1097/01.mpg.0000450396.76521.b0  0.091
2012 Ribes-Koninckx C, Mearin M, Korponay-Szabó I, Shamir R, Husby S, Ventura A, Branski D, Catassi C, Koletzko S, Mäki M, Troncone R, Zimmer K. Coeliac disease diagnosis: ESPGHAN 1990 criteria or need for a change? Results of a questionnaire Journal of Pediatric Gastroenterology and Nutrition. 54: 15-19. PMID 21716133 DOI: 10.1097/MPG.0b013e31822a00bb  0.09
2015 Amar D, Hait T, Izraeli S, Shamir R. Integrated analysis of numerous heterogeneous gene expression profiles for detecting robust disease-specific biomarkers and proposing drug targets Nucleic Acids Research. 43: 7779-7789. DOI: 10.1093/nar/gkv810  0.09
2011 Greco L, Timpone L, Abkari A, Abu-Zekry M, Attard T, Bouguerrà F, Cullufi P, Kansu A, Micetic-Turk D, Mišak Z, Roma E, Shamir R, Terzic S. Burden of celiac disease in the Mediterranean area World Journal of Gastroenterology. 17: 4971-4978. PMID 22174546 DOI: 10.3748/wjg.v17.i45.4971  0.089
2015 Vandenplas Y, Alarcon P, Fleischer D, Hernell O, Kolacek S, Laignelet H, Lönnerdal B, Raman R, Rigo J, Salvatore S, Shamir R, Staiano A, Szajewska H, Van Goudoever J, von Berg A, et al. Should Partial Hydrolysates Be Used As Starter Infant Formula? A Working Group Consensus. Journal of Pediatric Gastroenterology and Nutrition. PMID 26513620 DOI: 10.1097/Mpg.0000000000001014  0.089
2016 Szajewska H, Shamir R, Mearin L, Ribes-Koninckx C, Catassi C, Domellof M, Fewtrell MS, Husby S, Papadopoulou A, Vandenplas Y, Castillejo G, Kolacek S, Koletzko S, Korponay-Szabo IR, Lionetti E, et al. Gluten introduction and the risk of coeliac disease: A position paper by the european society for pediatric gastroenterology, hepatology, and nutrition Journal of Pediatric Gastroenterology and Nutrition. 62: 507-513. DOI: 10.1097/MPG.0000000000001105  0.088
2020 Voloshin T, Schneiderman RS, Volodin A, Shamir RR, Kaynan N, Zeevi E, Koren L, Klein-Goldberg A, Paz R, Giladi M, Bomzon Z, Weinberg U, Palti Y. Tumor Treating Fields (TTFields) Hinder Cancer Cell Motility through Regulation of Microtubule and Acting Dynamics. Cancers. 12. PMID 33080774 DOI: 10.3390/cancers12103016  0.088
2015 Meijer CR, Shamir R, Mearin ML. Coeliac disease and noncoeliac gluten sensitivity Journal of Pediatric Gastroenterology and Nutrition. 60: 429-432. PMID 25564803 DOI: 10.1097/MPG.0000000000000708  0.087
2015 Trope M, Shamir RR, Joskowicz L, Medress Z, Rosenthal G, Mayer A, Levin N, Bick A, Shoshan Y. The role of automatic computer-aided surgical trajectory planning in improving the expected safety of stereotactic neurosurgery. International Journal of Computer Assisted Radiology and Surgery. 10: 1127-40. PMID 25408305 DOI: 10.1007/s11548-014-1126-5  0.081
2014 Rinawi F, Rosenbach Y, Assa A, Shamir R. Ustekinumab for resistant pediatric crohn's disease Journal of Pediatric Gastroenterology and Nutrition. DOI: 10.1097/MPG.0000000000000503  0.08
2015 Guarino A, Ashkenazi S, Gendrel D, Lo Vecchio A, Shamir R, Szajewska H. European Society for Pediatric Gastroenterology, Hepatology, and Nutrition/European Society for Pediatric Infectious Diseases evidence-based guidelines for the management of acute gastroenteritis in children in Europe: update 2014 Zhonghua Er Ke Za Zhi. Chinese Journal of Pediatrics. 53: 499-509. PMID 26310642 DOI: 10.1097/MPG.0000000000000375  0.08
2012 Shamir R, Norsa L, Zevit N. Gluten-free diet in celiac disease: Protective or providing additive risk factors for the development of cardiovascular disease? Nutritional Therapy and Metabolism. 30: 1-9.  0.079
2011 Feig JE, Shang Y, Rotllan N, Vengrenyuk Y, Wu C, Shamir R, Torra IP, Fernandez-Hernando C, Fisher EA, Garabedian MJ. Statins promote the regression of atherosclerosis via activation of the CCR7-dependent emigration pathway in macrophages. Plos One. 6: e28534. PMID 22163030 DOI: 10.1371/Journal.Pone.0028534  0.079
2013 Mozer-Glassberg Y, Shamir R, Steinberg R, Kadmon G, Har-Lev E, Mor E, Shapiro R, Schonfeld T, Nahum E. Hypogammaglobulinemia in the early period after liver transplantation in children. Clinical Transplantation. 27: E289-94. PMID 23551332 DOI: 10.1111/ctr.12116  0.078
2015 Assa A, Avni I, Ben-Bassat O, Niv Y, Shamir R. Practice Variations in The Management of Inflammatory Bowel Disease Between Pediatric and Adult Gastroenterologists. Journal of Pediatric Gastroenterology and Nutrition. PMID 26284542 DOI: 10.1097/MPG.0000000000000943  0.078
2012 Tzfadia O, Amar D, Bradbury LMT, Wurtzel ET, Shamir R. The MORPH algorithm: Ranking candidate genes for membership in arabidopsis and tomato pathwaysC W Plant Cell. 24: 4389-4406. PMID 23204403 DOI: 10.1105/Tpc.112.104513  0.076
2011 Hojsak I, Shamir R. Tissue transglutaminase antibodies in celiac disease: Focus on the pediatric population Drugs of Today. 47: 683-691. PMID 21971542 DOI: 10.1358/dot.2011.47.9.1682709  0.075
2015 Amar D, Yekutieli D, Maron-Katz A, Hendler T, Shamir R. A hierarchical Bayesian model for flexible module discovery in three-way time-series data Bioinformatics. 31: i17-i26. PMID 26072479 DOI: 10.1093/bioinformatics/btv228  0.074
2015 Szajewska H, Shamir R, Chmielewska A, Pies̈cik-Lech M, Auricchio R, Ivarsson A, Kolacek S, Koletzko S, Korponay-Szabo I, Mearin ML, Ribes-Koninckx C, Troncone R. Systematic review with meta-analysis: Early infant feeding and coeliac disease-update 2015 Alimentary Pharmacology and Therapeutics. 41: 1038-1054. PMID 25819114 DOI: 10.1111/apt.13163  0.071
2015 Romano C, Hartman C, Privitera C, Cardile S, Shamir R. Current topics in the diagnosis and management of the pediatric non organic feeding disorders (NOFEDs) Clinical Nutrition. 34: 195-200. PMID 25240803 DOI: 10.1016/j.clnu.2014.08.013  0.071
2015 Vandenplas Y, Abkari A, Bellaiche M, Benninga M, Chouraqui JP, Çokura F, Harb T, Hegar B, Lifschitz C, Ludwig T, Miqdady M, de Morais MB, Osatakul S, Salvatore S, Shamir R, et al. Prevalence and Health Outcomes of Functional Gastrointestinal Symptoms in Infants From Birth to 12 Months of Age. Journal of Pediatric Gastroenterology and Nutrition. 61: 531-7. PMID 26308317 DOI: 10.1097/MPG.0000000000000949  0.07
2013 Norsa L, Shamir R, Zevit N, Verduci E, Hartman C, Ghisleni D, Riva E, Giovannini M. Cardiovascular disease risk factor profiles in children with celiac disease on gluten-free diets World Journal of Gastroenterology. 19: 5658-5664. PMID 24039358 DOI: 10.3748/wjg.v19.i34.5658  0.069
2011 Mozer-Glassberg Y, Zevit N, Rosenbach Y, Hartman C, Morgenstern S, Shamir R. Follow-up of children with celiac disease - Lost in translation? Digestion. 83: 283-287. PMID 21282953 DOI: 10.1159/000320714  0.067
2011 Rashi-Elkeles S, Elkon R, Shavit S, Lerenthal Y, Linhart C, Kupershtein A, Amariglio N, Rechavi G, Shamir R, Shiloh Y. Transcriptional modulation induced by ionizing radiation: P53 remains a central player Molecular Oncology. 5: 336-348. PMID 21795128 DOI: 10.1016/J.Molonc.2011.06.004  0.066
2012 Ben Lulu S, Coran AG, Shehadeh N, Shamir R, Mogilner JG, Sukhotnik I. Oral insulin stimulates intestinal epithelial cell turnover following massive small bowel resection in a rat and a cell culture model. Pediatric Surgery International. 28: 179-87. PMID 21986618 DOI: 10.1007/S00383-011-2991-4  0.066
2011 Paz A, Brownstein Z, Ber Y, Bialik S, David E, Sagir D, Ulitsky I, Elkon R, Kimchi A, Avraham KB, Shiloh Y, Shamir R. SPIKE: a database of highly curated human signaling pathways. Nucleic Acids Research. 39: D793-9. PMID 21097778 DOI: 10.1093/Nar/Gkq1167  0.065
2014 Donovan SM, Shamir R. Introduction to the yogurt in nutrition initiative and the first global summit on the health effects of yogurt American Journal of Clinical Nutrition. 99: 1209S-1211S. PMID 24646825 DOI: 10.3945/Ajcn.113.073429  0.065
2012 Shamir R. Can feeding practices during infancy change the risk for celiac disease? The Israel Medical Association Journal : Imaj. 14: 50-52. PMID 22624444  0.065
2012 Shamir R, Seidman EG. Enteral Nutrition in Crohn's-who for, when, how and which Formula? Clinical Dilemmas in Inflammatory Bowel Disease: New Challenges: Second Edition. 233-236. DOI: 10.1002/9781444342574.ch51  0.064
2015 Amar D, Frades I, Diels T, Zaltzman D, Ghatan N, Hedley PE, Alexandersson E, Tzfadia O, Shamir R. The MORPH-R web server and software tool for predicting missing genes in biological pathways Physiologia Plantarum. 155: 12-20. DOI: 10.1111/ppl.12326  0.063
2012 Rozov R, Halperin E, Shamir R. MGMR: leveraging RNA-Seq population data to optimize expression estimation Bmc Bioinformatics. 13: S2. PMID 22537041  0.062
2012 Szajewska H, Chmielewska A, Pieścik-Lech M, Ivarsson A, Kolacek S, Koletzko S, Mearin ML, Shamir R, Auricchio R, Troncone R. Systematic review: Early infant feeding and the prevention of coeliac disease Alimentary Pharmacology and Therapeutics. 36: 607-618. PMID 22905651 DOI: 10.1111/apt.12023  0.061
2013 Chmielewska A, Szajewska H, Shamir R. Celiac disease--prevention strategies through early infant nutrition World Review of Nutrition and Dietetics. 108: 91-97. PMID 24029792  0.06
2012 Taler I, Phillip M, Lebenthal Y, de Vries L, Shamir R, Shalitin S. Growth and metabolic control in patients with type 1 diabetes and celiac disease: A longitudinal observational case-control study Pediatric Diabetes. 13: 597-606. PMID 22564209 DOI: 10.1111/j.1399-5448.2012.00878.x  0.059
2013 Bansal MS, Banay G, Harlow TJ, Gogarten JP, Shamir R. Systematic inference of highways of horizontal gene transfer in prokaryotes. Bioinformatics (Oxford, England). 29: 571-9. PMID 23335015 DOI: 10.1093/Bioinformatics/Btt021  0.058
2013 Dann EJ, Shamir R, Mashiach T, Shaoul R, Badian A, Stravets T, Kerzman Y, Finkelbaum S, Gaitini D, Lorber A, Bonstein L. Early-onset plasmapheresis and LDL-apheresis provide better disease control for pediatric homozygous familial hypercholesterolemia than HMG-CoA reductase inhibitors and ameliorate atherosclerosis Transfusion and Apheresis Science. 49: 268-277. PMID 23791799 DOI: 10.1016/j.transci.2013.05.001  0.058
2014 Shamir R, Heyman MB, Koning F, Wijimenga C, Gutierrez-Achury J, Catassi C, Gatti S, Fasano A, Discepolo V, Korponay-Szabó IR, Zevit N, Maki M, Schaart MW, Mearin ML, Troncone R. Celiac disease: past, present, and future challenges: dedicated to the memory of our friend and colleague, Prof David Branski (1944-2013). Journal of Pediatric Gastroenterology and Nutrition. 59: S1-20. PMID 24840514 DOI: 10.1097/Mpg.0000000000000410  0.058
2013 Shamir R. Nutrition and growth in inflammatory bowel disease World Review of Nutrition and Dietetics. 106: 156-161. PMID 23428695 DOI: 10.1159/000342579  0.056
2012 Shamir R, Koletzko B, Agostoni C, Braegger C, Campoy C, Colomb V, Domellöf M, Decsi T, Fewtrell M, Goulet O, Michaelsen KF, Kolaček S, Mihatsch W, Moreno L, Puntis J, et al. Re: ESPGHAN's 2008 recommendation for early introduction of complementary foods: How good is the evidence? (Cattaneo etal. 2011) Maternal and Child Nutrition. 8: 136-138. PMID 22136224 DOI: 10.1111/j.1740-8709.2011.00388.x  0.055
2011 Guz-Mark A, Zevitt N, Rosenbach Y, Morgenstern S, Reznik D, Davidson K, Shamir R, Livni G. [Eosinophilic esophagitis--the experience in a tertiary pediatric center] Harefuah. 150: 432-437, 492. PMID 21678636  0.055
2014 Vriezinga SL, Auricchio R, Bravi E, Castillejo G, Chmielewska A, Escobar PC, Kolaček S, Koletzko S, Korponay-Szabo IR, Mummert E, Polanco I, Putter H, Ribes-Koninckx C, Shamir R, Szajewska H, et al. Randomized feeding intervention in infants at high risk for celiac disease New England Journal of Medicine. 371: 1304-1315. PMID 25271603 DOI: 10.1056/Nejmoa1404172  0.055
2012 Basel-Vanagaite L, Zevit N, Har Zahav A, Guo L, Parathath S, Pasmanik-Chor M, McIntyre AD, Wang J, Albin-Kaplanski A, Hartman C, Marom D, Zeharia A, Badir A, Shoerman O, Simon AJ, ... ... Shamir R, et al. Transient infantile hypertriglyceridemia, fatty liver, and hepatic fibrosis caused by mutated GPD1, encoding glycerol-3-phosphate dehydrogenase 1. American Journal of Human Genetics. 90: 49-60. PMID 22226083 DOI: 10.1016/J.Ajhg.2011.11.028  0.054
2013 Turck D, Michaelsen KF, Shamir R, Braegger C, Campoy C, Colomb V, Decsi T, Domellöf M, Fewtrell M, Kolacek S, Mihatsch W, Moreno LA, Van Goudoever J. World health organization 2006 child growth standards and 2007 growth reference charts: A discussion paper by the committee on nutrition of the european society for pediatric gastroenterology, hepatology, and nutrition Journal of Pediatric Gastroenterology and Nutrition. 57: 258-264. PMID 23880630 DOI: 10.1097/MPG.0b013e318298003f  0.054
2012 Hartman C, Shamir R. Nutrition and growth: Highlights from the first international meeting Expert Review of Endocrinology and Metabolism. 7: 407-410. DOI: 10.1586/eem.12.31  0.054
2013 Romano GH, Harari Y, Yehuda T, Podhorzer A, Rubinstein L, Shamir R, Gottlieb A, Silberberg Y, Pe'er D, Ruppin E, Sharan R, Kupiec M. Environmental stresses disrupt telomere length homeostasis. Plos Genetics. 9: e1003721. PMID 24039592 DOI: 10.1371/Journal.Pgen.1003721  0.054
2014 Guz-Mark A, Zevit N, Shamir R. Commentary: Duodenal intraepithelial lymphocytosis in children without coeliac disease - Authors' reply Alimentary Pharmacology and Therapeutics. 39: 1431. PMID 24849154 DOI: 10.1111/apt.12791  0.054
2012 Zevit N, Balicer RD, Cohen HA, Karsh D, Niv Y, Shamir R. Inverse association between Helicobacter pylori and pediatric asthma in a high-prevalence population. Helicobacter. 17: 30-5. PMID 22221613 DOI: 10.1111/j.1523-5378.2011.00895.x  0.052
2015 Patro-Golab B, Shamir R, Szajewska H. Yogurt for treating antibiotic-associated diarrhea: Systematic review and meta-analysis Nutrition. 31: 796-800. PMID 25933485 DOI: 10.1016/j.nut.2014.11.013  0.052
2015 Vandenplas Y, Benninga M, Broekaert I, Falconer J, Gottrand F, Guarino A, Lifschitz C, Lionetti P, Orel R, Papadopoulou A, Ribes-Koninckx C, Ruemmele FM, Salvatore S, Shamir R, Schäppi M, et al. Functional gastro-intestinal disorder algorithms focus on early recognition, parental reassurance and nutritional strategies. Acta Paediatrica (Oslo, Norway : 1992). PMID 26584953 DOI: 10.1111/apa.13270  0.051
2013 Shamir R, Phillip M, Turck D. World Review of Nutrition and Dietetics. Nutrition and growth. Introduction World Review of Nutrition and Dietetics. 106: 1-2. PMID 23428673  0.049
2015 Hecht C, Weber M, Grote V, Daskalou E, Dell'Era L, Flynn D, Gerasimidis K, Gottrand F, Hartman C, Hulst J, Joosten K, Karagiozoglou-Lampoudi T, Koetse HA, Kolaček S, Ksiazyk J, ... ... Shamir R, et al. Disease associated malnutrition correlates with length of hospital stay in children Clinical Nutrition. 34: 53-59. DOI: 10.1016/j.clnu.2014.01.003  0.049
2013 Szajewska H, Shamir R. Evidence-based research in pediatric nutrition. Preface World Review of Nutrition and Dietetics. 108: IX-X. PMID 24029795  0.049
2014 Guz-Mark A, Zevit N, Morgenstern S, Shamir R. Duodenal intraepithelial lymphocytosis is common in children without coeliac disease, and is not meaningfully influenced by Helicobacter pylori infection Alimentary Pharmacology and Therapeutics. 39: 1314-1320. PMID 24702235 DOI: 10.1111/apt.12739  0.049
2011 Bansal MS, Shamir R. A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 8: 848-50. PMID 20733245 DOI: 10.1109/Tcbb.2010.74  0.048
2011 Koletzko B, Agostoni C, Bergmann R, Ritzenthaler K, Shamir R. Physiological aspects of human milk lipids and implications for infant feeding: A workshop report Acta Paediatrica, International Journal of Paediatrics. 100: 1405-1415. PMID 21535133 DOI: 10.1111/j.1651-2227.2011.02343.x  0.048
2015 Rub G, Marderfeld L, Poraz I, Hartman C, Amsel S, Rosenbaum I, Pergamentzev-Karpol S, Monsonego-Ornan E, Shamir R. Validation of A Nutritional Screening Tool for Ambulatory Use in Pediatrics Journal of Pediatric Gastroenterology and Nutrition. DOI: 10.1097/MPG.0000000000001046  0.047
2011 Laurent LC, Ulitsky I, Slavin I, Tran H, Schork A, Morey R, Lynch C, Harness JV, Lee S, Barrero MJ, Ku S, Martynova M, Semechkin R, Galat V, Gottesfeld J, ... ... Shamir R, et al. Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture. Cell Stem Cell. 8: 106-18. PMID 21211785 DOI: 10.1016/J.Stem.2010.12.003  0.047
2016 Maron-Katz A, Vaisvaser S, Lin T, Hendler T, Shamir R. A large-scale perspective on stress-induced alterations in resting-state networks. Scientific Reports. 6: 21503. PMID 26898227 DOI: 10.1038/srep21503  0.047
2014 Shamir R. The introduction of complementary feeding Pakistan Paediatric Journal. 38: 61-63.  0.046
2014 Koletzko B, Shamir R, Phillip M. World Review of Nutrition and Dietetics. Nutrition and growth. Preface World Review of Nutrition and Dietetics. 109: IX. PMID 24457571  0.046
2013 Hojsak I, Zevit N, Waisbourd-Zinman O, Rosenbach Y, Mozer-Glassberg Y, Shalitin S, Phillip M, Shamir R. Concomitant autoantibodies in newly diagnosed diabetic children with transient celiac serology or proven celiac disease Journal of Pediatric Endocrinology and Metabolism. 26: 1099-1104. PMID 23817597 DOI: 10.1515/jpem-2013-0035  0.045
2013 Amar D, Safer H, Shamir R. Dissection of Regulatory Networks that Are Altered in Disease via Differential Co-expression Plos Computational Biology. 9. PMID 23505361 DOI: 10.1371/journal.pcbi.1002955  0.045
2012 Karlebach G, Shamir R. Constructing logical models of gene regulatory networks by integrating transcription factor-DNA interactions with expression data: An entropy-based approach Journal of Computational Biology. 19: 30-41. PMID 22216865 DOI: 10.1089/cmb.2011.0100  0.045
2014 Orenstein Y, Shamir R. A comparative analysis of transcription factor binding models learned from PBM, HT-SELEX and ChIP data Nucleic Acids Research. 42: e63. PMID 24500199 DOI: 10.1093/nar/gku117  0.045
2014 Amar D, Shamir R. Constructing module maps for integrated analysis of heterogeneous biological networks Nucleic Acids Research. 42: 4208-4219. PMID 24497192 DOI: 10.1093/nar/gku102  0.044
2015 Glanville JM, Brown S, Shamir R, Szajewska H, Eales JF. The scale of the evidence base on the health effects of conventional yogurt consumption: findings of a scoping review. Frontiers in Pharmacology. 6: 246. PMID 26578956 DOI: 10.3389/fphar.2015.00246  0.044
2015 Heshin-Bekenstein M, Turner D, Shamir R, Bar-Meir M, Dagan R, Zevit N, Silbermintz A. HBV Revaccination with Standard vs. Pre-S Vaccine in Previously Immunized Celiac Patients: A Randomized Control Trial. Journal of Pediatric Gastroenterology and Nutrition. PMID 25988560 DOI: 10.1097/MPG.0000000000000856  0.043
2011 Bansal MS, Banay G, Gogarten JP, Shamir R. Detecting highways of horizontal gene transfer. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 1087-114. PMID 21899418 DOI: 10.1089/Cmb.2011.0066  0.041
2014 Rashi-Elkeles S, Warnatz HJ, Elkon R, Kupershtein A, Chobod Y, Paz A, Amstislavskiy V, Sultan M, Safer H, Nietfeld W, Lehrach H, Shamir R, Yaspo ML, Shiloh Y. Parallel profiling of the transcriptome, cistrome, and epigenome in the cellular response to ionizing radiation. Science Signaling. 7: rs3. PMID 24825921 DOI: 10.1126/Scisignal.2005032  0.04
2011 Elkan-Miller T, Ulitsky I, Hertzano R, Rudnicki A, Dror AA, Lenz DR, Elkon R, Irmler M, Beckers J, Shamir R, Avraham KB. Integration of transcriptomics, proteomics, and microRNA analyses reveals novel microRNA regulation of targets in the mammalian inner ear. Plos One. 6: e18195. PMID 21483685 DOI: 10.1371/Journal.Pone.0018195  0.04
2012 Shamir R. Thiamine-deficient infant formula: What happened and what have we learned? Annals of Nutrition and Metabolism. 60: 185-187. PMID 22699764 DOI: 10.1159/000338211  0.039
2015 Werlin S, Konikoff FM, Halpern Z, Barkay O, Yerushalmi B, Broide E, Santo E, Shamir R, Shaoul R, Shteyer E, Yaakov Y, Cohen M, Kerem E, Ruszniewski P, Masson E, et al. Genetic and electrophysiological characteristics of recurrent acute pancreatitis. Journal of Pediatric Gastroenterology and Nutrition. 60: 675-9. PMID 25383785 DOI: 10.1097/Mpg.0000000000000623  0.037
2015 Szajewska H, Shamir R, Turck D, van Goudoever JB, Mihatsch WA, Fewtrell M. Recommendations on probiotics in allergy prevention should not be based on pooling data from different strains. The Journal of Allergy and Clinical Immunology. PMID 26329511 DOI: 10.1016/j.jaci.2015.07.022  0.037
2013 Pieścik-Lech M, Shamir R, Guarino A, Szajewska H. Review article: The management of acute gastroenteritis in children Alimentary Pharmacology and Therapeutics. 37: 289-303. PMID 23190209 DOI: 10.1111/apt.12163  0.037
2013 Orenstein Y, Mick E, Shamir R. RAP: Accurate and fast motif finding based on protein-binding microarray data Journal of Computational Biology. 20: 375-382. PMID 23464877 DOI: 10.1089/cmb.2012.0253  0.036
2014 Bell RE, Khaled M, Netanely D, Schubert S, Golan T, Buxbaum A, Janas MM, Postolsky B, Goldberg MS, Shamir R, Levy C. Transcription factor/microRNA axis blocks melanoma invasion program by miR-211 targeting NUAK1. The Journal of Investigative Dermatology. 134: 441-51. PMID 23934065 DOI: 10.1038/Jid.2013.340  0.035
2012 Hojsak I, Mozer-Glassberg Y, Segal Gilboa N, Weinberger R, Hartman C, Shamir R. Celiac disease screening assays for children younger than 3 years of age: The performance of three serological tests Digestive Diseases and Sciences. 57: 127-132. PMID 21847565 DOI: 10.1007/s10620-011-1857-x  0.034
2015 Peleg N, Zevit N, Shamir R, Chodick G, Levy I. Seasonal influenza vaccination rates and reasons for non-vaccination in children with gastrointestinal disorders. Vaccine. 33: 182-6. PMID 25444802 DOI: 10.1016/j.vaccine.2014.10.086  0.034
2015 Assa A, Ish-Tov A, Rinawi F, Shamir R. School attendance in children with functional abdominal pain and inflammatory bowel diseases Journal of Pediatric Gastroenterology and Nutrition. 61: 553-557. DOI: 10.1097/MPG.0000000000000850  0.034
2015 Wessels MM, Vriezinga SL, Koletzko S, Werkstetter K, Castillejo-De Villasante G, Shamir R, Hartman C, Putter H, van der Pal SM, Wijmenga C, Bravi E, Mearin ML. Impact on parents of HLA-DQ2/DQ8 genotyping in healthy children from coeliac families. European Journal of Human Genetics : Ejhg. 23: 405-8. PMID 24916643 DOI: 10.1038/Ejhg.2014.113  0.034
2015 Ohana R, Weiman-Kelman B, Raviv S, Tamm ER, Pasmanik-Chor M, Rinon A, Netanely D, Shamir R, Solomon AS, Ashery-Padan R. MicroRNAs are essential for differentiation of the retinal pigmented epithelium and maturation of adjacent photoreceptors. Development (Cambridge, England). 142: 2487-98. PMID 26062936 DOI: 10.1242/dev.121533  0.033
2011 Levinson-Castiel R, Hartman C, Morgenstern S, Avitzur Y, Hirsch A, Rosenbach Y, Shapiro R, Zevit N, Fleischaker H, Niv Y, Shamir R. The role of duodenal bulb biopsy in the diagnosis of celiac disease in children. Journal of Clinical Gastroenterology. 45: 26-9. PMID 20628309 DOI: 10.1097/MCG.0b013e3181e04d26  0.033
2011 Davidson S, Natan D, Novikov I, Sokolover N, Erlich A, Shamir R. Body mass index and weight-for-length ratio references for infants born at 33-42 weeks gestation: A new tool for anthropometric assessment Clinical Nutrition. 30: 634-639. PMID 21524833 DOI: 10.1016/j.clnu.2011.03.010  0.033
2016 Koletzko B, Shamir R, Turck D, Phillip M. Author Index World Review of Nutrition and Dietetics. 138-145. DOI: 10.1159/000441827  0.031
2011 Pevzner PA, Shamir R. Preface: 2nd Satellite Meeting on Bioinformatics Education, Research in Computational Molecular Biology (RECOMB-BE 2010). Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 865. PMID 21563980 DOI: 10.1089/Cmb.2011.007P  0.031
2011 Zevit N, Niv Y, Shirin H, Shamir R. Age and gender differences in urea breath test results. European Journal of Clinical Investigation. 41: 767-72. PMID 21261618 DOI: 10.1111/j.1365-2362.2010.02467.x  0.031
2015 Sloutskin A, Danino YM, Orenstein Y, Zehavi Y, Doniger T, Shamir R, Juven-Gershon T. ElemeNT: a computational tool for detecting core promoter elements Transcription. 6: 41-50. DOI: 10.1080/21541264.2015.1067286  0.031
2012 Orenstein Y, Linhart C, Shamir R. Assessment of Algorithms for Inferring Positional Weight Matrix Motifs of Transcription Factor Binding Sites Using Protein Binding Microarray Data Plos One. 7. PMID 23029415 DOI: 10.1371/journal.pone.0046145  0.031
2013 Orenstein Y, Shamir R. Design of shortest double-stranded DNA sequences covering all k-mers with applications to protein-binding microarrays and synthetic enhancers Bioinformatics. 29: i71-i79. PMID 23813011 DOI: 10.1093/bioinformatics/btt230  0.03
2012 Hagag S, Kubitschek-Barreira P, Neves GW, Amar D, Nierman W, Shalit I, Shamir R, Lopes-Bezerra L, Osherov N. Transcriptional and proteomic analysis of the Aspergillus fumigatus ΔprtT protease-deficient mutant. Plos One. 7: e33604. PMID 22514608 DOI: 10.1371/journal.pone.0033604  0.03
2015 Patro-Gołab B, Shamir R, Szajewska H. Yogurt for treating acute gastroenteritis in children: Systematic review and meta-analysis Clinical Nutrition. 34: 818-824. DOI: 10.1016/j.clnu.2014.09.004  0.029
2014 Kedmi A, Zehavi Y, Glick Y, Orenstein Y, Ideses D, Wachtel C, Doniger T, Waldman Ben-Asher H, Muster N, Thompson J, Anderson S, Avrahami D, Yates JR, Shamir R, Gerber D, et al. Drosophila TRF2 is a preferential core promoter regulator. Genes & Development. 28: 2163-74. PMID 25223897 DOI: 10.1101/Gad.245670.114  0.029
2013 Yaron S, Shachar D, Abramas L, Riskin A, Bader D, Litmanovitz I, Bar-Yoseph F, Cohen T, Levi L, Lifshitz Y, Shamir R, Shaoul R. Effect of high β-palmitate content in infant formula on the intestinal microbiota of term infants. Journal of Pediatric Gastroenterology and Nutrition. 56: 376-81. PMID 23201699 DOI: 10.1097/Mpg.0B013E31827E1Ee2  0.029
2013 Shamir R, Shehadeh N. Insulin in human milk and the use of hormones in infant formulas Nestle Nutrition Institute Workshop Series. 77: 57-64. PMID 24107496 DOI: 10.1159/000351384  0.028
2016 Hartman C, Marderfeld L, Davidson K, Mozer-Glassberg Y, Poraz I, Silbermintz A, Zevit N, Shamir R. Food Intake Adequacy in Children and Adolescents with Inflammatory Bowel Disease Journal of Pediatric Gastroenterology and Nutrition. DOI: 10.1097/MPG.0000000000001170  0.027
2016 Szajewska H, Guarino A, Hojsak I, Indrio F, Kolacek S, Shamir R, Vandenplas Y, Weizman Z. Authors' response Journal of Pediatric Gastroenterology and Nutrition. 62: e12-e13. DOI: 10.1097/MPG.0000000000000970  0.027
2016 Koletzko B, Shamir R, Turck D, Phillip M. Preliminaries World Review of Nutrition and Dietetics. DOI: 10.1159/000441825  0.027
2013 Arslanoglu S, Corpeleijn W, Moro G, Braegger C, Campoy C, Colomb V, Decsi T, Domellöf M, Fewtrell M, Hojsak I, Mihatsch W, Mølgaard C, Shamir R, Turck D, Van Goudoever J. Donor human milk for preterm infants: Current evidence and research directions Journal of Pediatric Gastroenterology and Nutrition. 57: 535-542. PMID 24084373 DOI: 10.1097/MPG.0b013e3182a3af0a  0.026
2014 Shamir R, Koletzko B. Prenatal and postnatal nutrition for future health Current Opinion in Clinical Nutrition and Metabolic Care. 17: 247-248. PMID 24572836 DOI: 10.1097/MCO.0000000000000053  0.026
2014 Szajewska H, Guarino A, Hojsak I, Indrio F, Kolacek S, Shamir R, Vandenplas Y, Weizman Z. Use of probiotics for management of acute gastroenteritis: A position paper by the ESPGHAN working group for probiotics and prebiotics Journal of Pediatric Gastroenterology and Nutrition. 58: 531-539. PMID 24614141 DOI: 10.1097/MPG.0000000000000320  0.026
2010 Turner D, Levine A, Weiss B, Hirsh A, Shamir R, Shaoul R, Berkowitz D, Bujanover Y, Cohen S, Eshach-Adiv O, Jamal G, Kori M, Lerner A, On A, et al. Evidence-based recommendations for bowel cleansing before colonoscopy in children: a report from a national working group. Endoscopy. 42: 1063-70. PMID 20669091 DOI: 10.1055/s-0030-1255646  0.025
2011 Feig JE, Rong JX, Shamir R, Sanson M, Vengrenyuk Y, Liu J, Rayner K, Moore K, Garabedian M, Fisher EA. HDL promotes rapid atherosclerosis regression in mice and alters inflammatory properties of plaque monocyte-derived cells. Proceedings of the National Academy of Sciences of the United States of America. 108: 7166-71. PMID 21482781 DOI: 10.1073/Pnas.1016086108  0.024
2011 Braegger C, Chmielewska A, Decsi T, Kolacek S, Mihatsch W, Moreno L, Pieścik M, Puntis J, Shamir R, Szajewska H, Turck D, Van Goudoever J. Supplementation of infant formula with probiotics and/or prebiotics: A systematic review and comment by the ESPGHAN committee on nutrition Journal of Pediatric Gastroenterology and Nutrition. 52: 238-250. PMID 21150647 DOI: 10.1097/MPG.0b013e3181fb9e80  0.024
2012 Hartman C, Shamir R, Hecht C, Koletzko B. Malnutrition screening tools for hospitalized children Current Opinion in Clinical Nutrition and Metabolic Care. 15: 303-309. PMID 22588189 DOI: 10.1097/MCO.0b013e328352dcd4  0.024
2015 Zevit N, Shamir R. 3.12 Regurgitation and gastroesophageal reflux World Review of Nutrition and Dietetics. 113: 203-208. DOI: 10.1159/000360341  0.024
2011 Sukhotnik I, Shamir R, Bashenko Y, Mogilner JG, Chemodanov E, Shaoul R, Coran AG, Shehadeh N. Effect of oral insulin on diabetes-induced intestinal mucosal growth in rats. Digestive Diseases and Sciences. 56: 2566-74. PMID 21374061 DOI: 10.1007/S10620-011-1654-6  0.024
2012 Mihatsch WA, Braegger CP, Decsi T, Kolacek S, Lanzinger H, Mayer B, Moreno LA, Pohlandt F, Puntis J, Shamir R, Stadtmüller U, Szajewska H, Turck D, van Goudoever JB. Critical systematic review of the level of evidence for routine use of probiotics for reduction of mortality and prevention of necrotizing enterocolitis and sepsis in preterm infants Clinical Nutrition. 31: 6-15. PMID 21996513 DOI: 10.1016/j.clnu.2011.09.004  0.023
2013 Braegger C, Campoy C, Colomb V, Decsi T, Domellof M, Fewtrell M, Hojsak I, Mihatsch W, Molgaard C, Shamir R, Turck D, Van Goudoever J. Vitamin d in the healthy European paediatric population Journal of Pediatric Gastroenterology and Nutrition. 56: 692-701. PMID 23708639 DOI: 10.1097/MPG.0b013e31828f3c05  0.023
2012 Lavi O, Dror G, Shamir R. Network-induced classification kernels for gene expression profile analysis Journal of Computational Biology. 19: 694-709. PMID 22697242 DOI: 10.1089/cmb.2012.0065  0.021
2015 Riskin A, Hartman C, Shamir R. Parenteral nutrition in very low birth weight preterm infants Israel Medical Association Journal. 17: 310-315. PMID 26137659  0.021
2011 Feig JE, Rong JX, Shamir R, Sanson M, Vengrenyuk Y, Liu J, Rayner K, Moore K, Garabedian M, Fisher EA. HDL promotes rapid atherosclerosis regression in mice and alters inflammatory properties of plaque monocytederived cells (Journal of Biological Chemistry (2011) 108, 17 (7166-7171) DOI: 10.1073/pnas.1016086108) Proceedings of the National Academy of Sciences of the United States of America. 108: 14371. DOI: 10.1073/pnas.1111090108  0.021
2016 Koletzko B, Shamir R, Turck D, Phillip M. Subject Index World Review of Nutrition and Dietetics. 146-151. DOI: 10.1159/000441828  0.019
2016 Lebenthal Y, Yackobovitch-Gavan M, Lazar L, Shalitin S, Tenenbaum A, Shamir R, Phillip M. Effect of a nutritional supplement on growth in short and lean prepubertal children: A prospective, randomized, double-blind, placebo-controlled study World Review of Nutrition and Dietetics. 114: 123-124. DOI: 10.1159/000441823  0.019
2014 Lebenthal Y, Yackobovitch-Gavan M, Lazar L, Shalitin S, Tenenbaum A, Shamir R, Phillip M. Effect of a nutritional supplement on growth in short and lean prepubertal children: a prospective, randomized, double-blind, placebo-controlled study. The Journal of Pediatrics. 165: 1190-1193.e1. PMID 25241181 DOI: 10.1016/j.jpeds.2014.08.011  0.019
2013 Koletzko B, Shamir R. Prenatal and postnatal nutrition: Impact on child health Current Opinion in Clinical Nutrition and Metabolic Care. 16: 290-291. PMID 23481149 DOI: 10.1097/MCO.0b013e32836051ad  0.018
2012 Baxter JP, Gillanders L, Angstmann K, Staun M, O'Hanlon C, Smith T, Joly F, Thul P, Jonkers C, Wanten G, Gardiner K, Klek S, Cuerda C, Magambo W, Hawthorne AB, ... ... Shamir R, et al. Home parenteral nutrition: An international benchmarking exercise E-Spen Journal. 7: e211-e214. DOI: 10.1016/j.clnme.2012.08.001  0.018
2012 Riskin A, Agostoni C, Shamir R. Physiology of the gastrointestinal tract Neonatology: a Practical Approach to Neonatal Diseases. 263-280. DOI: 10.1007/978-88-470-1405-3_42  0.018
2011 Koletzko B, Shamir R. Nutrition in early life: Malnutrition, obesity, and special needs of premature babies Current Opinion in Clinical Nutrition and Metabolic Care. 14: 274-275. PMID 21415730 DOI: 10.1097/MCO.0b013e3283458678  0.018
2012 Shamir R, Weiss D. Semiotics of Indicators: The Case of Corporate Human Rights Responsibility Governance by Indicators: Global Power Through Quantification and Rankings. DOI: 10.1093/acprof:oso/9780199658244.003.0005  0.017
2012 Koletzko B, Shamir R, Ashwell M. Quality and safety aspects of infant nutrition Annals of Nutrition and Metabolism. 60: 179-184. PMID 22699763 DOI: 10.1159/000338803  0.016
2015 Lacaille F, Gupte G, Colomb V, D'antiga L, Hartman C, Hojsak I, Kolacek S, Puntis J, Shamir R. Intestinal failure-associated liver disease: A position paper of the ESPGHAN working group of intestinal failure and intestinal transplantation Journal of Pediatric Gastroenterology and Nutrition. 60: 272-283. DOI: 10.1097/MPG.0000000000000586  0.016
2016 Szajewska H, Canani RB, Guarino A, Hojsak I, Indrio F, Kolacek S, Orel R, Shamir R, Vandenplas Y, Van Goudoever JB, Weizman Z. Probiotics for the prevention of antibiotic-associated diarrhea in children Journal of Pediatric Gastroenterology and Nutrition. 62: 495-506. DOI: 10.1097/MPG.0000000000001081  0.015
2011 Hojsak I, Avitzur Y, Mor E, Shamir R, Haimi-Cohen Y, Zakay-Rones Z, Wolf D, Shapiro R. Antibody response to influenza vaccine in pediatric liver transplant recipients Pediatric Infectious Disease Journal. 30: 491-494. PMID 21248658 DOI: 10.1097/INF.0b013e31820b7c22  0.014
2012 Waisbourd-Zinman O, Rosenbach Y, Shalitin S, Hojsak I, Mozer-Glassberg Y, Phillip M, Shamir R. Spontaneous normalization of anti-tissue transglutaminase antibody levels is common in children with type 1 diabetes mellitus Digestive Diseases and Sciences. 57: 1314-1320. PMID 22173747 DOI: 10.1007/s10620-011-2016-0  0.013
2011 Ozery-Flato M, Shamir R. An O (n3/2√log (n)) algorithm for sorting by reciprocal translocations Journal of Discrete Algorithms. 9: 344-357. DOI: 10.1016/j.jda.2011.04.003  0.013
2011 Agostoni C, Braegger C, Decsi T, Kolacek S, Koletzko B, Mihatsch W, Moreno LA, Puntis J, Shamir R, Szajewska H, Turck D, Van Goudoever J. Role of dietary factors and food habits in the development of childhood obesity: A commentary by the espghan committee on nutrition Journal of Pediatric Gastroenterology and Nutrition. 52: 662-669. PMID 21593641 DOI: 10.1097/MPG.0b013e3182169253  0.013
2014 Sagy O, Shamir R, Rechavi O. Examination of exhaustive cloning attempts reveals that C. elegans piRNAs, transposons, and repeat sequences are efficiently cloned in yeast, but not in bacteria Frontiers in Genetics. 5. DOI: 10.3389/fgene.2014.00275  0.013
2016 Koletzko B, Shamir R. Infant formula: does one size fit all? Current Opinion in Clinical Nutrition and Metabolic Care. DOI: 10.1097/MCO.0000000000000277  0.01
2016 Koletzko B, Shamir R, Turck D, Phillip M. Preface World Review of Nutrition and Dietetics. 114: IX. DOI: 10.1159/000356103  0.01
2015 Rinawi F, Iancu TC, Hartman C, Cohen H, Yarden-Bilavsky H, Lev MR, Shamir R. Fat malabsorption due to bile acid synthesis defect. The Israel Medical Association Journal : Imaj. 17: 190-2. PMID 25946774  0.01
2015 Zevit N, Shamir R. Wireless capsule endoscopy of the small intestine in children Journal of Pediatric Gastroenterology and Nutrition. 60: 696-701. DOI: 10.1097/MPG.0000000000000782  0.01
2015 Zeira R, Shamir R. Sorting by cuts, joins and whole chromosome duplications Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9133: 396-409. DOI: 10.1007/978-3-319-19929-0_34  0.01
2014 Rozov R, Shamir R, Halperin E. Fast lossless compression via cascading Bloom filters Bmc Bioinformatics. 15. PMID 25252952 DOI: 10.1186/1471-2105-15-S9-S7  0.01
2014 Vandenplas Y, Bhatia J, Shamir R, Agostoni C, Turck D, Staiano A, Szajewska H. Hydrolyzed formulas for allergy prevention Journal of Pediatric Gastroenterology and Nutrition. 58: 549-552. PMID 24464230 DOI: 10.1097/MPG.0000000000000318  0.01
2014 Szajewska H, Urbańska M, Chmielewska A, Weizman Z, Shamir R. Meta-analysis: Lactobacillus reuteri strain DSM 17938 (and the original strain ATCC 55730) for treating acute gastroenteritis in children Beneficial Microbes. 5: 285-293. PMID 24463209 DOI: 10.3920/BM2013.0056  0.01
2014 Domellöf M, Braegger C, Campoy C, Colomb V, Decsi T, Fewtrell M, Hojsak I, Mihatsch W, Molgaard C, Shamir R, Turck D, Van Goudoever J. Iron requirements of infants and toddlers Journal of Pediatric Gastroenterology and Nutrition. 58: 119-129. PMID 24135983 DOI: 10.1097/MPG.0000000000000206  0.01
2014 Troncone R, Shamir R. Presentation of the 2013 ESPGHAN distinguished service award to professor David Branski Journal of Pediatric Gastroenterology and Nutrition. DOI: 10.1097/MPG.0000000000000374  0.01
2013 Hojsak I, Shamir R. Safety of probiotics World Review of Nutrition and Dietetics. 107: 161-170. DOI: 10.1159/000345744  0.01
2012 Linhart C, Halperin Y, Darom A, Kidron S, Broday L, Shamir R. A novel candidate cis-regulatory motif pair in the promoters of germline and oogenesis genes in C. elegans Genome Research. 22: 76-83. PMID 21930893 DOI: 10.1101/gr.115626.110  0.01
2011 Ozery-Flato M, Linhart C, Trakhtenbrot L, Izraeli S, Shamir R. Large-scale analysis of chromosomal aberrations in cancer karyotypes reveals two distinct paths to aneuploidy Genome Biology. 12. PMID 21714908 DOI: 10.1186/gb-2011-12-6-r61  0.01
2011 Agostoni C, Braegger C, Decsi T, Kolacek S, Mihatsch W, Moreno LA, Puntis J, Shamir R, Szajewska H, Turck D, Van Goudoever J. Supplementation of N-3 LCPUFA to the diet of children older than 2 years: A commentary by the ESPGHAN committee on nutrition Journal of Pediatric Gastroenterology and Nutrition. 53: 2-10. PMID 21694531 DOI: 10.1097/MPG.0b013e318216f009  0.01
2011 Sharon H, Amar D, Levdansky E, Mircus G, Shadkchan Y, Shamir R, Osherov N. PrtT-regulated proteins secreted by Aspergillus fumigatus activate MAPK signaling in exposed A549 lung cells leading to necrotic cell death Plos One. 6. PMID 21412410 DOI: 10.1371/journal.pone.0017509  0.01
2011 Shamir R. Socially Responsible Private Regulation: World-Culture or World-Capitalism? Law and Society Review. 45: 313-336. DOI: 10.1111/j.1540-5893.2011.00439.x  0.01
2010 Shamir R. Capitalism, governance, and authority: The case of corporate social responsibility Annual Review of Law and Social Science. 6: 531-553. DOI: 10.1146/annurev-lawsocsci-102209-153000  0.01
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