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Rizal F. Hariadi, Ph.D. - Publications

Affiliations: 
1998-2003 Physics Washington State University, Pullman, WA, United States 
 2002-2011 Applied Physics California Institute of Technology, Pasadena, CA 
 2011-2014 Cell and Developmental Biology University of Michigan, Ann Arbor, Ann Arbor, MI 
 2015-2016 Harvard University, Cambridge, MA, United States 
 2016- Physics Arizona State University, Tempe, AZ, United States 
Website:
http://www.rizalhariadi.com
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28/37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Sentosa J, Djutanta F, Horne B, Showkeir D, Rezvani R, Leff C, Pradhan S, Hariadi RF. Gradient-mixing LEGO robots for purifying DNA origami nanostructures of multiple components by rate-zonal centrifugation. Plos One. 18: e0283134. PMID 37467178 DOI: 10.1371/journal.pone.0283134  0.406
2021 Shetty RM, Brady SR, Rothemund PWK, Hariadi RF, Gopinath A. Bench-Top Fabrication of Single-Molecule Nanoarrays by DNA Origami Placement. Acs Nano. PMID 34228915 DOI: 10.1021/acsnano.1c01150  0.396
2019 Green LN, Subramanian HKK, Mardanlou V, Kim J, Hariadi RF, Franco E. Autonomous dynamic control of DNA nanostructure self-assembly. Nature Chemistry. PMID 31011170 DOI: 10.1038/S41557-019-0251-8  0.715
2017 Hariadi RF, Appukutty AJ, Sivaramakrishnan S. O-Myo! An O-Shaped Myosin Gliding Assay for Characterizing Long-Term Actin-Myosin Behaviors Biophysical Journal. 112: 263a. DOI: 10.1016/J.Bpj.2016.11.1432  0.535
2017 Mardanlou V, Yaghoubi KC, Green LN, Subramanian HKK, Hariadi RF, Kim J, Franco E. A coarse-grained model captures the temporal evolution of DNA nanotube length distributions Natural Computing. 17: 183-199. DOI: 10.1007/S11047-017-9657-7  0.651
2016 Hariadi RF, Appukutty AJ, Sivaramakrishnan S. Engineering Circular Gliding of Actin Filaments Along Myosin-Patterned DNA Nanotube Rings to Study Long-Term Actin-Myosin Behaviors. Acs Nano. PMID 27571140 DOI: 10.1021/Acsnano.6B01294  0.577
2016 Sommese RF, Hariadi RF, Kim K, Liu M, Tyska MJ, Sivaramakrishnan S. Patterning Protein Complexes on DNA Nanostructures Using a GFP-Nanobody. Protein Science : a Publication of the Protein Society. PMID 27538185 DOI: 10.1002/Pro.3020  0.617
2015 Hariadi RF, Yurke B, Winfree E. Thermodynamics and kinetics of DNA nanotube polymerization from single-filament measurements. Chemical Science. 6: 2252-2267. PMID 29308139 DOI: 10.1039/C3Sc53331J  0.779
2015 Hariadi RF, Winfree E, Yurke B. Determining hydrodynamic forces in bursting bubbles using DNA nanotube mechanics. Proceedings of the National Academy of Sciences of the United States of America. 112: E6086-95. PMID 26504222 DOI: 10.1073/Pnas.1424673112  0.692
2015 Verma V, Mallik L, Hariadi RF, Sivaramakrishnan S, Skiniotis G, Joglekar AP. Using Protein Dimers to Maximize the Protein Hybridization Efficiency with Multisite DNA Origami Scaffolds. Plos One. 10: e0137125. PMID 26348722 DOI: 10.1371/Journal.Pone.0137125  0.57
2015 Hariadi RF, Sommese RF, Adhikari AS, Taylor RE, Sutton S, Spudich JA, Sivaramakrishnan S. Mechanical coordination in motor ensembles revealed using engineered artificial myosin filaments. Nature Nanotechnology. PMID 26149240 DOI: 10.1038/Nnano.2015.132  0.669
2015 Green LN, Subramanian HK, Mardanlou V, Kim J, Hariadi RF, Franco E. 72 Dynamic self-assembly of DNA nanotubes. Journal of Biomolecular Structure & Dynamics. 33: 46-7. PMID 26103283 DOI: 10.1080/07391102.2015.1032689  0.729
2015 Tee YH, Shemesh T, Thiagarajan V, Hariadi RF, Anderson KL, Page C, Volkmann N, Hanein D, Sivaramakrishnan S, Kozlov MM, Bershadsky AD. Cellular chirality arising from the self-organization of the actin cytoskeleton. Nature Cell Biology. 17: 445-57. PMID 25799062 DOI: 10.1038/Ncb3137  0.544
2015 Hariadi RF, Sommese RF, Sivaramakrishnan S. Tuning myosin-driven sorting on cellular actin networks. Elife. 4. PMID 25738229 DOI: 10.7554/Elife.05472  0.499
2015 Hariadi RF, Sommese RF, Sivaramakrishnan S. Author response: Tuning myosin-driven sorting on cellular actin networks Elife. DOI: 10.7554/Elife.05472.018  0.491
2015 Hariadi RF, Yurke B, Winfree E. Thermodynamics and kinetics of DNA nanotube polymerization from single-filament measurements Chemical Science. 6: 2252-2267. DOI: 10.1039/c3sc53331j  0.755
2014 Hariadi RF, Cale M, Sivaramakrishnan S. Myosin lever arm directs collective motion on cellular actin network. Proceedings of the National Academy of Sciences of the United States of America. 111: 4091-6. PMID 24591646 DOI: 10.1073/Pnas.1315923111  0.527
2014 Hariadi RF, Cale M, Sivaramakrishnan S. Myosin Lever Arm Directs the Collective Movement Patterns of Motor Proteins Biophysical Journal. 106: 180a-181a. DOI: 10.1016/J.Bpj.2013.11.1021  0.525
2013 Zhang DY, Hariadi RF, Choi HMT, Winfree E. Integrating DNA strand-displacement circuitry with DNA tile self-assembly Nature Communications. 4. PMID 23756381 DOI: 10.1038/Ncomms2965  0.785
2012 Evans CG, Hariadi RF, Winfree E. Direct atomic force microscopy observation of DNA tile crystal growth at the single-molecule level Journal of the American Chemical Society. 134: 10485-10492. PMID 22694312 DOI: 10.1021/Ja301026Z  0.777
2010 Hariadi RF, Yurke B. Elongational-flow-induced scission of DNA nanotubes in laminar flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 82: 046307. PMID 21230390 DOI: 10.1103/Physreve.82.046307  0.515
2010 Hariadi RF, Yurke B, Winfree E. Toward De Novo Recapitulation of Cytoskeleton Dynamics with DNA Nanotubes Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.3014  0.782
2008 Yin P, Hariadi RF, Sahu S, Choi HM, Park SH, Labean TH, Reif JH. Programming DNA tube circumferences. Science (New York, N.Y.). 321: 824-6. PMID 18687961 DOI: 10.1126/Science.1157312  0.74
2008 Fujibayashi K, Hariadi R, Park SH, Winfree E, Murata S. Toward reliable algorithmic self-assembly of DNA tiles: A fixed-width cellular automaton pattern Nano Letters. 8: 1791-1797. PMID 18162000 DOI: 10.1021/Nl0722830  0.764
2008 Fujibayashi K, Hariadi R, Sung HP, Winfree E, Murata S. Erratum: Toward reliable algorithmic self-assembly of DNA tiles: A fixed-width cellular automaton pattern (Nano Letters (2008) 8: 10 (1791)) Nano Letters. 8. DOI: 10.1021/Nl802586E  0.746
2007 Yin P, Hariadi RF, Sahu S, Choi HMT, Park SH, Walters B, LaBean TH, Reif JH. Abstract: Single strand DNA tiles and molecular tubes with precisely programmable circumferences 4th Conference On Foundations of Nanoscience: Self-Assembled Architectures and Devices, Fnano 2007. 71-78.  0.725
2002 Hariadi R, Langford SC, Dickinson JT. Controlling Nanometer-Scale Crystal Growth on a Model Biomaterial with a Scanning Force Microscope Langmuir. 18: 7773-7776. DOI: 10.1021/La025984F  0.511
2000 Dickinson JT, Hariadi RF, Scudiero L, Langford SC. Scanning force microscope study of detachment of nanometer adhering particulates Materials Science and Engineering A. 288: 182-186. DOI: 10.1016/S0921-5093(00)00866-2  0.495
Low-probability matches (unlikely to be authored by this person)
2022 Gandavadi D, Hariadi RF. The right shoe for the job. Science (New York, N.Y.). 375: 1089-1090. PMID 35271310 DOI: 10.1126/science.abn9659  0.293
2018 Sgouralis I, Madaan S, Djutanta F, Kha R, Hariadi RF, Presse S. A Bayesian Nonparametric Approach to Single Molecule Förster Resonance Energy Transfer. The Journal of Physical Chemistry. B. PMID 30571128 DOI: 10.1021/Acs.Jpcb.8B09752  0.292
1999 Hariadi RF, Langford SC, Dickinson JT. Scanning force microscope observations of particle detachment from substrates: The role of water vapor in tribological debonding Journal of Applied Physics. 86: 4885-4891. DOI: 10.1063/1.371457  0.27
2000 Dickinson JT, Hariadi RF, Langford SC. Mechanical detachment of nanometer particles strongly adhering to a substrate: An application of corrosive tribology Journal of Adhesion. 74: 373-390. DOI: 10.1080/00218460008034537  0.268
1999 Dickinson JT, Hariadi RF, Scudiero L, Langford SC. A scanning force microscope study of detachment of nanometer-sized particles from glass surfaces Tribology Letters. 7: 113-119. DOI: 10.1023/A:1019129622285  0.258
2023 Pradhan S, Swanson CJ, Leff C, Tengganu I, Bergeman MH, Wisna GBM, Hogue IB, Hariadi RF. Viral Attachment Blocking Chimera Composed of DNA Origami and Nanobody Inhibits Pseudorabies Virus Infection In Vitro. Acs Nano. PMID 37982733 DOI: 10.1021/acsnano.3c01408  0.209
2023 Djutanta F, Brown PT, Nainggolan B, Coullomb A, Radhakrishnan S, Sentosa J, Yurke B, Hariadi RF, Shepherd DP. Decoding the hydrodynamic properties of microscale helical propellers from Brownian fluctuations. Proceedings of the National Academy of Sciences of the United States of America. 120: e2220033120. PMID 37235635 DOI: 10.1073/pnas.2220033120  0.154
1999 Dickinson JT, Hariadi RF, Scudiero L, Langford SC. Scanning force microscope studies of detachment of nanometer adhering particulates Materials Research Society Symposium - Proceedings. 566: 273-278.  0.132
2022 Pradhan S, Varsani A, Leff C, Swanson CJ, Hariadi RF. Viral Aggregation: The Knowns and Unknowns. Viruses. 14. PMID 35216031 DOI: 10.3390/v14020438  0.074
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