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Stefan C. Materna, Ph.D. - Publications

Affiliations: 
Biochemistry and Molecular Biophysics California Institute of Technology, Pasadena, CA 
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20 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 LaBelle J, Ramos-Martinez A, Shen K, Motta-Mena LB, Gardner KH, Materna SC, Woo S. TAEL 2.0: An Improved Optogenetic Expression System for Zebrafish. Zebrafish. 20-28. PMID 33555975 DOI: 10.1089/zeb.2020.1951  0.354
2017 Materna SC. Using Morpholinos to Probe Gene Networks in Sea Urchin. Methods in Molecular Biology (Clifton, N.J.). 1565: 87-104. PMID 28364236 DOI: 10.1007/978-1-4939-6817-6_8  0.555
2014 Robinson AS, Materna SC, Barnes RM, De Val S, Xu SM, Black BL. An arterial-specific enhancer of the human endothelin converting enzyme 1 (ECE1) gene is synergistically activated by Sox17, FoxC2, and Etv2. Developmental Biology. 395: 379-89. PMID 25179465 DOI: 10.1016/J.Ydbio.2014.08.027  0.349
2013 Li E, Materna SC, Davidson EH. New regulatory circuit controlling spatial and temporal gene expression in the sea urchin embryo oral ectoderm GRN. Developmental Biology. 382: 268-79. PMID 23933172 DOI: 10.1016/J.Ydbio.2013.07.027  0.621
2013 Materna SC, Swartz SZ, Smith J. Notch and Nodal control forkhead factor expression in the specification of multipotent progenitors in sea urchin. Development (Cambridge, England). 140: 1796-806. PMID 23533178 DOI: 10.1242/Dev.091157  0.372
2013 Materna SC, Ransick A, Li E, Davidson EH. Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos. Developmental Biology. 375: 92-104. PMID 23261933 DOI: 10.1016/J.Ydbio.2012.11.033  0.61
2012 Li E, Materna SC, Davidson EH. Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo. Developmental Biology. 369: 377-85. PMID 22771578 DOI: 10.1016/J.Ydbio.2012.06.022  0.643
2012 Materna SC, Davidson EH. A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos. Developmental Biology. 364: 77-87. PMID 22306924 DOI: 10.1016/J.Ydbio.2012.01.017  0.594
2010 Materna SC, Nam J, Davidson EH. High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development. Gene Expression Patterns : Gep. 10: 177-84. PMID 20398801 DOI: 10.1016/J.Gep.2010.04.002  0.682
2009 Materna SC, Davidson EH. Unraveling the gene regulatory network underlying mesoderm subdivision in the sea urchin embryo Developmental Biology. 331: 517. DOI: 10.1016/J.Ydbio.2009.05.484  0.594
2008 Materna SC, Oliveri P. A protocol for unraveling gene regulatory networks. Nature Protocols. 3: 1876-87. PMID 19008874 DOI: 10.1038/Nprot.2008.187  0.674
2008 Materna SC, Cameron RA. The sea urchin genome as a window on function. The Biological Bulletin. 214: 266-73. PMID 18574103 DOI: 10.2307/25470668  0.618
2007 Materna SC, Davidson EH. Logic of gene regulatory networks. Current Opinion in Biotechnology. 18: 351-4. PMID 17689240 DOI: 10.1016/J.Copbio.2007.07.008  0.553
2006 Howard-Ashby M, Materna SC, Brown CT, Tu Q, Oliveri P, Cameron RA, Davidson EH. High regulatory gene use in sea urchin embryogenesis: Implications for bilaterian development and evolution. Developmental Biology. 300: 27-34. PMID 17101125 DOI: 10.1016/J.Ydbio.2006.10.016  0.755
2006 Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, ... ... Materna SC, et al. The genome of the sea urchin Strongylocentrotus purpuratus. Science (New York, N.Y.). 314: 941-52. PMID 17095691 DOI: 10.1126/Science.1133609  0.503
2006 Materna SC, Berney K, Cameron RA. The S. purpuratus genome: a comparative perspective. Developmental Biology. 300: 485-95. PMID 17056028 DOI: 10.1016/J.Ydbio.2006.09.033  0.604
2006 Howard-Ashby M, Materna SC, Brown CT, Chen L, Cameron RA, Davidson EH. Identification and characterization of homeobox transcription factor genes in Strongylocentrotus purpuratus, and their expression in embryonic development. Developmental Biology. 300: 74-89. PMID 17055477 DOI: 10.1016/J.Ydbio.2006.08.039  0.668
2006 Howard-Ashby M, Materna SC, Brown CT, Chen L, Cameron RA, Davidson EH. Gene families encoding transcription factors expressed in early development of Strongylocentrotus purpuratus. Developmental Biology. 300: 90-107. PMID 17054934 DOI: 10.1016/J.Ydbio.2006.08.033  0.669
2006 Materna SC, Howard-Ashby M, Gray RF, Davidson EH. The C2H2 zinc finger genes of Strongylocentrotus purpuratus and their expression in embryonic development. Developmental Biology. 300: 108-20. PMID 16997293 DOI: 10.1016/J.Ydbio.2006.08.032  0.669
2005 Materna SC, Marwan W. Estimating the number of plasmids taken up by a eukaryotic cell during transfection and evidence that antisense RNA abolishes gene expression in Physarum polycephalum. Fems Microbiology Letters. 243: 29-35. PMID 15667997 DOI: 10.1016/J.Femsle.2004.11.035  0.41
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