Ali Cetin, Ph.D. - Publications

2013- University of Washington - Seattle/ NIH, Seattle, WA, United States 
 2019- Biology Stanford University, Palo Alto, CA 
Neuronal Circuitry

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Wang Q, Wang Y, Kuo HC, Xie P, Kuang X, Hirokawa KE, Naeemi M, Yao S, Mallory M, Ouellette B, Lesnar P, Li Y, Ye M, Chen C, Xiong W, ... ... Cetin A, et al. Regional and cell-type-specific afferent and efferent projections of the mouse claustrum. Cell Reports. 42: 112118. PMID 36774552 DOI: 10.1016/j.celrep.2023.112118  0.362
2022 Yao S, Wang Q, Hirokawa KE, Ouellette B, Ahmed R, Bomben J, Brouner K, Casal L, Caldejon S, Cho A, Dotson NI, Daigle TL, Egdorf T, Enstrom R, Gary A, ... ... Cetin A, et al. A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex. Nature Neuroscience. PMID 36550293 DOI: 10.1038/s41593-022-01219-x  0.34
2021 Muñoz-Castañeda R, Zingg B, Matho KS, Chen X, Wang Q, Foster NN, Li A, Narasimhan A, Hirokawa KE, Huo B, Bannerjee S, Korobkova L, Park CS, Park YG, Bienkowski MS, ... ... Cetin A, et al. Cellular anatomy of the mouse primary motor cortex. Nature. 598: 159-166. PMID 34616071 DOI: 10.1038/s41586-021-03970-w  0.753
2021 Mich JK, Graybuck LT, Hess EE, Mahoney JT, Kojima Y, Ding Y, Somasundaram S, Miller JA, Kalmbach BE, Radaelli C, Gore BB, Weed N, Omstead V, Bishaw Y, Shapovalova NV, ... ... Cetin A, et al. Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex. Cell Reports. 34: 108754. PMID 33789096 DOI: 10.1016/j.celrep.2021.108754  0.351
2021 Graybuck LT, Daigle TL, Sedeño-Cortés AE, Walker M, Kalmbach B, Lenz GH, Morin E, Nguyen TN, Garren E, Bendrick JL, Kim TK, Zhou T, Mortrud M, Yao S, Siverts LA, ... ... Cetin AH, et al. Enhancer viruses for combinatorial cell-subclass-specific labeling. Neuron. PMID 33789083 DOI: 10.1016/j.neuron.2021.03.011  0.795
2020 Yao S, Yuan P, Ouellette B, Zhou T, Mortrud M, Balaram P, Chatterjee S, Wang Y, Daigle TL, Tasic B, Kuang X, Gong H, Luo Q, Zeng S, Curtright A, ... ... Cetin A, et al. RecV recombinase system for in vivo targeted optogenomic modifications of single cells or cell populations. Nature Methods. PMID 32203389 DOI: 10.1038/S41592-020-0774-3  0.705
2019 Haery L, Deverman BE, Matho KS, Cetin A, Woodard K, Cepko C, Guerin KI, Rego MA, Ersing I, Bachle SM, Kamens J, Fan M. Adeno-Associated Virus Technologies and Methods for Targeted Neuronal Manipulation. Frontiers in Neuroanatomy. 13: 93. PMID 31849618 DOI: 10.3389/fnana.2019.00093  0.462
2019 Lo L, Yao S, Kim DW, Cetin A, Harris J, Zeng H, Anderson DJ, Weissbourd B. Connectional architecture of a mouse hypothalamic circuit node controlling social behavior. Proceedings of the National Academy of Sciences of the United States of America. PMID 30898882 DOI: 10.1073/Pnas.1817503116  0.452
2018 Tasic B, Yao Z, Graybuck LT, Smith KA, Nguyen TN, Bertagnolli D, Goldy J, Garren E, Economo MN, Viswanathan S, Penn O, Bakken T, Menon V, Miller J, Fong O, ... ... Cetin A, et al. Shared and distinct transcriptomic cell types across neocortical areas. Nature. 563: 72-78. PMID 30382198 DOI: 10.1038/S41586-018-0654-5  0.681
2018 Chatterjee S, Sullivan HA, MacLennan BJ, Xu R, Hou Y, Lavin TK, Lea NE, Michalski JE, Babcock KR, Dietrich S, Matthews GA, Beyeler A, Calhoon GG, Glober G, Whitesell JD, ... ... Cetin A, et al. Nontoxic, double-deletion-mutant rabies viral vectors for retrograde targeting of projection neurons. Nature Neuroscience. PMID 29507411 DOI: 10.1038/S41593-018-0091-7  0.772
2017 Long B, Zhou Z, Cetin A, Ting J, Gwinn R, Tasic B, Daigle T, Lein E, Zeng H, Saggau P, Hawrylycz M, Peng H. SmartScope2: Simultaneous Imaging and Reconstruction of Neuronal Morphology. Scientific Reports. 7: 9325. PMID 28839271 DOI: 10.1038/S41598-017-10067-W  0.402
2017 Chung S, Weber F, Zhong P, Tan CL, Nguyen TN, Beier KT, Hörmann N, Chang WC, Zhang Z, Do JP, Yao S, Krashes MJ, Tasic B, Cetin A, Zeng H, et al. Identification of preoptic sleep neurons using retrograde labelling and gene profiling. Nature. PMID 28514446 DOI: 10.1038/Nature22350  0.325
2015 Nassi JJ, Avery MC, Cetin AH, Roe AW, Reynolds JH. Optogenetic Activation of Normalization in Alert Macaque Visual Cortex. Neuron. 86: 1504-17. PMID 26087167 DOI: 10.1016/j.neuron.2015.05.040  0.725
2014 Cetin A, Callaway EM. Optical control of retrogradely infected neurons using drug-regulated "TLoop" lentiviral vectors. Journal of Neurophysiology. 111: 2150-9. PMID 24572099 DOI: 10.1152/jn.00495.2013  0.634
2013 Liu YJ, Ehrengruber MU, Negwer M, Shao HJ, Cetin AH, Lyon DC. Tracing inputs to inhibitory or excitatory neurons of mouse and cat visual cortex with a targeted rabies virus. Current Biology : Cb. 23: 1746-55. PMID 23993841 DOI: 10.1016/J.Cub.2013.07.033  0.647
2013 Ruiz O, Lustig BR, Nassi JJ, Cetin A, Reynolds JH, Albright TD, Callaway EM, Stoner GR, Roe AW. Optogenetics through windows on the brain in the nonhuman primate. Journal of Neurophysiology. 110: 1455-67. PMID 23761700 DOI: 10.1152/jn.00153.2013  0.788
2013 Yin L, Geng Y, Osakada F, Sharma R, Cetin AH, Callaway EM, Williams DR, Merigan WH. Imaging light responses of retinal ganglion cells in the living mouse eye. Journal of Neurophysiology. 109: 2415-21. PMID 23407356 DOI: 10.1152/Jn.01043.2012  0.692
2013 Yin L, Masella BD, Geng Y, Dalkara D, Osakada F, Sharma R, Zhang J, Cetin AH, Callaway EM, Flannery JG, Schaffer DV, Williams DR, Merigan WH. Optical recording of the light response of ganglion cells in the living eye Optics Infobase Conference Papers. DOI: 10.1364/Fio.2013.Ftu4I.3  0.676
2013 Nassi JJ, Cetin AH, Roe AW, Callaway EM, Deisseroth K, Reynolds JH. A precise and minimally invasive approach to optogenetics in the awake primate Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8586. DOI: 10.1117/12.2007609  0.782
2012 Knobloch HS, Charlet A, Hoffmann LC, Eliava M, Khrulev S, Cetin AH, Osten P, Schwarz MK, Seeburg PH, Stoop R, Grinevich V. Evoked axonal oxytocin release in the central amygdala attenuates fear response. Neuron. 73: 553-66. PMID 22325206 DOI: 10.1016/J.Neuron.2011.11.030  0.768
2011 Osakada F, Mori T, Cetin AH, Marshel JH, Virgen B, Callaway EM. New rabies virus variants for monitoring and manipulating activity and gene expression in defined neural circuits. Neuron. 71: 617-31. PMID 21867879 DOI: 10.1016/J.Neuron.2011.07.005  0.736
2010 Wall NR, Wickersham IR, Cetin A, De La Parra M, Callaway EM. Monosynaptic circuit tracing in vivo through Cre-dependent targeting and complementation of modified rabies virus. Proceedings of the National Academy of Sciences of the United States of America. 107: 21848-53. PMID 21115815 DOI: 10.1073/Pnas.1011756107  0.788
2007 Zhu P, Aller MI, Baron U, Cambridge S, Bausen M, Herb J, Sawinski J, Cetin A, Osten P, Nelson ML, Kügler S, Seeburg PH, Sprengel R, Hasan MT. Silencing and un-silencing of tetracycline-controlled genes in neurons. Plos One. 2: e533. PMID 17579707 DOI: 10.1371/Journal.Pone.0000533  0.762
2007 Osten P, Grinevich V, Cetin A. Viral vectors: a wide range of choices and high levels of service. Handbook of Experimental Pharmacology. 177-202. PMID 17203656 DOI: 10.1007/978-3-540-35109-2_8  0.74
2007 Cetin A, Komai S, Eliava M, Seeburg PH, Osten P. Stereotaxic gene delivery in the rodent brain (Nature Protocol (2007) (3166-3173) 10.1038/nprot.2006.450) Nature Protocols. 1.  0.757
2006 Cetin A, Komai S, Eliava M, Seeburg PH, Osten P. Stereotaxic gene delivery in the rodent brain. Nature Protocols. 1: 3166-73. PMID 17406580 DOI: 10.1038/nprot.2006.450  0.777
2006 Komai S, Licznerski P, Cetin A, Waters J, Denk W, Brecht M, Osten P. Postsynaptic excitability is necessary for strengthening of cortical sensory responses during experience-dependent development. Nature Neuroscience. 9: 1125-33. PMID 16921372 DOI: 10.1038/nn1752  0.732
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