Sharon Crook - Publications

Affiliations: 
Arizona State University, Tempe, AZ, United States 
Area:
Mathematical Biology

33 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Haynes VR, Zhou Y, Crook SM. Discovering optimal features for neuron-type identification from extracellular recordings. Frontiers in Neuroinformatics. 18: 1303993. PMID 38371496 DOI: 10.3389/fninf.2024.1303993  0.723
2023 Birgiolas J, Haynes V, Gleeson P, Gerkin RC, Dietrich SW, Crook S. NeuroML-DB: Sharing and characterizing data-driven neuroscience models described in NeuroML. Plos Computational Biology. 19: e1010941. PMID 36867658 DOI: 10.1371/journal.pcbi.1010941  0.684
2022 Eriksson O, Bhalla US, Blackwell KT, Crook SM, Keller D, Kramer A, Linne ML, Saudargienė A, Wade RC, Hellgren Kotaleski J. Combining hypothesis- and data-driven neuroscience modeling in FAIR workflows. Elife. 11. PMID 35792600 DOI: 10.7554/eLife.69013  0.666
2019 Gleeson P, Cantarelli M, Marin B, Quintana A, Earnshaw M, Sadeh S, Piasini E, Birgiolas J, Cannon RC, Cayco-Gajic NA, Crook S, Davison AP, Dura-Bernal S, Ecker A, Hines ML, et al. Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits. Neuron. PMID 31201122 DOI: 10.1016/J.Neuron.2019.05.019  0.786
2018 Neal ML, König M, Nickerson D, Misirli G, Kalbasi R, Dräger A, Atalag K, Chelliah V, Cooling MT, Cook DL, Crook S, de Alba M, Friedman SH, Garny A, Gennari JH, et al. Harmonizing semantic annotations for computational models in biology. Briefings in Bioinformatics. PMID 30462164 DOI: 10.1093/Bib/Bby087  0.668
2018 Gerkin RC, Jarvis RJ, Crook SM. Towards systematic, data-driven validation of a collaborative, multi-scale model of . Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 373. PMID 30201844 DOI: 10.1098/rstb.2017.0381  0.76
2017 Birgiolas J, Jernigan CM, Gerkin RC, Smith BH, Crook SM. SwarmSight: Real-time Tracking of Insect Antenna Movements and Proboscis Extension Reflex Using a Common Preparation and Conventional Hardware. Journal of Visualized Experiments : Jove. PMID 29364251 DOI: 10.3791/56803  0.725
2016 Samavat M, Luli D, Crook S. Neuronal Network Models for Sensory Discrimination. Conference Record. Asilomar Conference On Signals, Systems & Computers. 2016: 1066-1073. PMID 29881246 DOI: 10.1109/ACSSC.2016.7869533  0.683
2016 Sharpee TO, Destexhe A, Kawato M, Sekulić V, Skinner FK, Wójcik DK, Chintaluri C, Cserpán D, Somogyvári Z, Kim JK, Kilpatrick ZP, Bennett MR, Josić K, Elices I, Arroyo D, ... ... Crook SM, et al. 25th Annual Computational Neuroscience Meeting: CNS-2016 Bmc Neuroscience. 17: 54. PMID 27534393 DOI: 10.1186/S12868-016-0283-6  0.718
2016 Birgiolas J, Jernigan CM, Smith BH, Crook SM. SwarmSight: Measuring the temporal progression of animal group activity levels from natural-scene and laboratory videos. Behavior Research Methods. PMID 27130170 DOI: 10.3758/S13428-016-0732-2  0.746
2015 Berger SD, Crook SM. Modeling the Influence of Ion Channels on Neuron Dynamics in Drosophila. Frontiers in Computational Neuroscience. 9: 139. PMID 26635592 DOI: 10.3389/fncom.2015.00139  0.607
2014 Cannon RC, Gleeson P, Crook S, Ganapathy G, Marin B, Piasini E, Silver RA. LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2. Frontiers in Neuroinformatics. 8: 79. PMID 25309419 DOI: 10.3389/Fninf.2014.00079  0.413
2014 Vella M, Cannon RC, Crook S, Davison AP, Ganapathy G, Robinson HP, Silver RA, Gleeson P. libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience. Frontiers in Neuroinformatics. 8: 38. PMID 24795618 DOI: 10.3389/fninf.2014.00038  0.408
2014 Crook SM, Dietrich S. Model exchange with the NeuroML model database Bmc Neuroscience. 15. DOI: 10.1186/1471-2202-15-S1-P171  0.444
2013 Herrera-Valdez MA, McKiernan EC, Berger SD, Ryglewski S, Duch C, Crook S. Relating ion channel expression, bifurcation structure, and diverse firing patterns in a model of an identified motor neuron. Journal of Computational Neuroscience. 34: 211-29. PMID 22878689 DOI: 10.1007/S10827-012-0416-6  0.636
2013 Berger SD, Baer SM, Crook SM. A continuum approach to model neurites/dendrites with emerging subtrees Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P73  0.662
2012 Crook SM, Bednar JA, Berger S, Cannon R, Davison AP, Djurfeldt M, Eppler J, Kriener B, Furber S, Graham B, Plesser HE, Schwabe L, Smith L, Steuber V, van Albada S. Creating, documenting and sharing network models. Network (Bristol, England). 23: 131-49. PMID 22994683 DOI: 10.3109/0954898X.2012.722743  0.662
2012 Cannon R, Gleeson P, Crook S, Silver RA. A declarative model specification system allowing NeuroML to be extended with user-defined component types Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-P42  0.454
2012 Gleeson P, Piasini E, Crook S, Cannon R, Steuber V, Jaeger D, Solinas S, D’Angelo E, Silver RA. The Open Source Brain Initiative: enabling collaborative modelling in computational neuroscience Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-O7  0.676
2011 Gleeson P, Crook S, Silver A, Cannon R. Development of NeuroML version 2.0: greater extensibility, support for abstract neuronal models and interaction with Systems Biology languages Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P29  0.523
2011 Smith A, Cruz-Aponte M, McKiernan EC, Crook S, Herrera-Valdez M. Differential contribution of A-type potassium currents in shaping neuronal responses to synaptic input Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P147  0.41
2010 Gleeson P, Crook S, Cannon RC, Hines ML, Billings GO, Farinella M, Morse TM, Davison AP, Ray S, Bhalla US, Barnes SR, Dimitrova YD, Silver RA. NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail. Plos Computational Biology. 6: e1000815. PMID 20585541 DOI: 10.1371/Journal.Pcbi.1000815  0.73
2010 Herrera-Valdez MA, Berger SD, Duch C, Crook S. Differential contribution of voltage-dependent potassium currents to neuronal excitability Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-P159  0.648
2009 Berger SD, Herrera-Valdez MA, Duch C, Crook S. Passive current transfer in wildtype and genetically modified Drosophila motoneuron dendrites Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P346  0.59
2009 Herrera-Valdez MA, Berger SD, Duch C, Crook S. Predicting changes in neuronal excitability type in response to genetic manipulations of K+-channels Bmc Neuroscience. 10. DOI: 10.1186/1471-2202-10-S1-P301  0.622
2009 Crook S, Silver RA, Gleeson P. Describing and exchanging models of neurons and neuronal networks with NeuroML Bmc Neuroscience. 10: 1-2. DOI: 10.1186/1471-2202-10-S1-L1  0.511
2009 Baer SM, Crook S, Dur-e-Ahmad M, Jackiewicz Z. Numerical solution of calcium-mediated dendritic branch model Journal of Computational and Applied Mathematics. 229: 416-424. DOI: 10.1016/J.Cam.2008.04.011  0.311
2007 Crook SM, Dur-E-Ahmad M, Baer SM. A model of activity-dependent changes in dendritic spine density and spine structure. Mathematical Biosciences and Engineering : Mbe. 4: 617-31. PMID 17924715 DOI: 10.3934/Mbe.2007.4.617  0.312
2007 Kurian M, Crook S. Two-compartment models of spasticity in spinal motor neurons following spinal cord injury Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P101  0.343
2007 Gleeson P, Crook S, Steuber V, Silver RA. Using NeuroML and neuroConstruct to build neuronal network models for multiple simulators Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P1  0.512
1998 Crook SM, Ermentrout GB, Bower JM. Dendritic and synaptic effects in systems of coupled cortical oscillators. Journal of Computational Neuroscience. 5: 315-29. PMID 9663554 DOI: 10.1023/A:1008839112707  0.493
1998 Crook SM, Ermentrout GB, Bower JM. Spike frequency adaptation affects the synchronization properties of networks of cortical oscillations. Neural Computation. 10: 837-54. PMID 9573408 DOI: 10.1162/089976698300017511  0.496
1997 Crook SM, Ermentrout GB, Vanier MC, Bower JM. The role of axonal delay in the synchronization of networks of coupled cortical oscillators. Journal of Computational Neuroscience. 4: 161-72. PMID 9154522 DOI: 10.1023/A:1008843412952  0.725
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