| Year |
Citation |
Score |
| 2022 |
Campoy E, Puig M, Yakymenko I, Lerga-Jaso J, Cáceres M. Genomic architecture and functional effects of potential human inversion supergenes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 377: 20210209. PMID 35694745 DOI: 10.1098/rstb.2021.0209 |
0.474 |
|
| 2022 |
Valls-Margarit J, Galván-Femenía I, Matías-Sánchez D, Blay N, Puiggròs M, Carreras A, Salvoro C, Cortés B, Amela R, Farre X, Lerga-Jaso J, Puig M, Sánchez-Herrero JF, Moreno V, Perucho M, et al. GCAT|Panel, a comprehensive structural variant haplotype map of the Iberian population from high-coverage whole-genome sequencing. Nucleic Acids Research. 50: 2464-2479. PMID 35176773 DOI: 10.1093/nar/gkac076 |
0.312 |
|
| 2020 |
Maggiolini FAM, Sanders AD, Shew CJ, Sulovari A, Mao Y, Puig M, Catacchio CR, Dellino M, Palmisano D, Mercuri L, Bitonto M, Porubský D, Cáceres M, Eichler EE, Ventura M, et al. Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution. Genome Research. PMID 33093070 DOI: 10.1101/gr.265322.120 |
0.436 |
|
| 2020 |
Puig M, Lerga-Jaso J, Giner-Delgado C, Pacheco S, Izquierdo D, Delprat A, Gayà-Vidal M, Regan JF, Karlin-Neumann G, Cáceres M. Determining the impact of uncharacterized inversions in the human genome by droplet digital PCR. Genome Research. PMID 32424072 DOI: 10.1101/Gr.255273.119 |
0.423 |
|
| 2019 |
Giner-Delgado C, Villatoro S, Lerga-Jaso J, Gayà-Vidal M, Oliva M, Castellano D, Pantano L, Bitarello BD, Izquierdo D, Noguera I, Olalde I, Delprat A, Blancher A, Lalueza-Fox C, Esko T, et al. Evolutionary and functional impact of common polymorphic inversions in the human genome. Nature Communications. 10: 4222. PMID 31530810 DOI: 10.1038/S41467-019-12173-X |
0.494 |
|
| 2016 |
Vicente-Salvador D, Puig M, Gayà-Vidal M, Pacheco S, Giner-Delgado C, Noguera I, Izquierdo D, Martínez-Fundichely A, Ruiz-Herrera A, Estivill X, Aguado C, Lucas-Lledó JI, Cáceres M. Detailed analysis of inversions predicted between two human genomes: errors, real polymorphisms, and their origin and population distribution. Human Molecular Genetics. PMID 28025331 DOI: 10.1093/Hmg/Ddw415 |
0.434 |
|
| 2015 |
Puig M, Castellano D, Pantano L, Giner-Delgado C, Izquierdo D, Gayà-Vidal M, Lucas-Lledó JI, Esko T, Terao C, Matsuda F, Cáceres M. Functional Impact and Evolution of a Novel Human Polymorphic Inversion That Disrupts a Gene and Creates a Fusion Transcript. Plos Genetics. 11: e1005495. PMID 26427027 DOI: 10.1371/Journal.Pgen.1005495 |
0.442 |
|
| 2015 |
Puig M, Casillas S, Villatoro S, Cáceres M. Human inversions and their functional consequences. Briefings in Functional Genomics. 14: 369-79. PMID 25998059 DOI: 10.1093/bfgp/elv020 |
0.759 |
|
| 2014 |
Aguado C, Gayà-Vidal M, Villatoro S, Oliva M, Izquierdo D, Giner-Delgado C, Montalvo V, García-González J, Martínez-Fundichely A, Capilla L, Ruiz-Herrera A, Estivill X, Puig M, Cáceres M. Validation and genotyping of multiple human polymorphic inversions mediated by inverted repeats reveals a high degree of recurrence. Plos Genetics. 10: e1004208. PMID 24651690 DOI: 10.1371/journal.pgen.1004208 |
0.412 |
|
| 2014 |
Martínez-Fundichely A, Casillas S, Egea R, Ràmia M, Barbadilla A, Pantano L, Puig M, Cáceres M. InvFEST, a database integrating information of polymorphic inversions in the human genome. Nucleic Acids Research. 42: D1027-32. PMID 24253300 DOI: 10.1093/Nar/Gkt1122 |
0.691 |
|
| 2013 |
Prado-Martinez J, Hernando-Herraez I, Lorente-Galdos B, Dabad M, Ramirez O, Baeza-Delgado C, Morcillo-Suarez C, Alkan C, Hormozdiari F, Raineri E, Estellé J, Fernandez-Callejo M, Valles M, Ritscher L, Schöneberg T, et al. The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild. Bmc Genomics. 14: 363. PMID 23721540 DOI: 10.1186/1471-2164-14-363 |
0.719 |
|
| 2013 |
Escaramís G, Tornador C, Bassaganyas L, Rabionet R, Tubio JM, Martínez-Fundichely A, Cáceres M, Gut M, Ossowski S, Estivill X. PeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing data. Plos One. 8: e63377. PMID 23704902 DOI: 10.1371/Journal.Pone.0063377 |
0.327 |
|
| 2013 |
Lucas Lledó JI, Cáceres M. On the power and the systematic biases of the detection of chromosomal inversions by paired-end genome sequencing. Plos One. 8: e61292. PMID 23637806 DOI: 10.1371/journal.pone.0061292 |
0.319 |
|
| 2009 |
Armengol L, Villatoro S, González JR, Pantano L, García-Aragonés M, Rabionet R, Cáceres M, Estivill X. Identification of copy number variants defining genomic differences among major human groups. Plos One. 4: e7230. PMID 19789632 DOI: 10.1371/Journal.Pone.0007230 |
0.322 |
|
| 2008 |
Thomas JW, Cáceres M, Lowman JJ, Morehouse CB, Short ME, Baldwin EL, Maney DL, Martin CL. The chromosomal polymorphism linked to variation in social behavior in the white-throated sparrow (Zonotrichia albicollis) is a complex rearrangement and suppressor of recombination. Genetics. 179: 1455-68. PMID 18562641 DOI: 10.1534/Genetics.108.088229 |
0.328 |
|
| 2007 |
Cáceres M, Sullivan RT, Thomas JW. A recurrent inversion on the eutherian X chromosome. Proceedings of the National Academy of Sciences of the United States of America. 104: 18571-6. PMID 18003915 DOI: 10.1073/Pnas.0706604104 |
0.473 |
|
| 2007 |
Calarco JA, Xing Y, Cáceres M, Calarco JP, Xiao X, Pan Q, Lee C, Preuss TM, Blencowe BJ. Global analysis of alternative splicing differences between humans and chimpanzees. Genes & Development. 21: 2963-75. PMID 17978102 DOI: 10.1101/Gad.1606907 |
0.655 |
|
| 2007 |
Bosch N, Cáceres M, Cardone MF, Carreras A, Ballana E, Rocchi M, Armengol L, Estivill X. Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Human Molecular Genetics. 16: 2572-82. PMID 17684299 DOI: 10.1093/Hmg/Ddm209 |
0.427 |
|
| 2007 |
Greenhall JA, Zapala MA, Cáceres M, Libiger O, Barlow C, Schork NJ, Lockhart DJ. Detecting genetic variation in microarray expression data. Genome Research. 17: 1228-35. PMID 17609390 DOI: 10.1101/Gr.6307307 |
0.391 |
|
| 2007 |
Cáceres M, Suwyn C, Maddox M, Thomas JW, Preuss TM. Increased cortical expression of two synaptogenic thrombospondins in human brain evolution. Cerebral Cortex (New York, N.Y. : 1991). 17: 2312-21. PMID 17182969 DOI: 10.1093/Cercor/Bhl140 |
0.588 |
|
| 2006 |
Cáceres M, Thomas JW. The gene of retroviral origin Syncytin 1 is specific to hominoids and is inactive in Old World monkeys. The Journal of Heredity. 97: 100-6. PMID 16424151 DOI: 10.1093/Jhered/Esj011 |
0.439 |
|
| 2005 |
Lemos B, Meiklejohn CD, Cáceres M, Hartl DL. Rates of divergence in gene expression profiles of primates, mice, and flies: stabilizing selection and variability among functional categories. Evolution; International Journal of Organic Evolution. 59: 126-37. PMID 15792233 DOI: 10.1111/J.0014-3820.2005.Tb00900.X |
0.373 |
|
| 2005 |
Casals F, Cáceres M, Manfrin MH, González J, Ruiz A. Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex. Genetics. 169: 2047-59. PMID 15695364 DOI: 10.1534/Genetics.104.035048 |
0.672 |
|
| 2004 |
Preuss TM, Cáceres M, Oldham MC, Geschwind DH. Human brain evolution: insights from microarrays. Nature Reviews. Genetics. 5: 850-60. PMID 15520794 DOI: 10.1038/nrg1469 |
0.633 |
|
| 2004 |
Marquès-Bonet T, Cáceres M, Bertranpetit J, Preuss TM, Thomas JW, Navarro A. Chromosomal rearrangements and the genomic distribution of gene-expression divergence in humans and chimpanzees. Trends in Genetics : Tig. 20: 524-9. PMID 15475109 DOI: 10.1016/J.Tig.2004.08.009 |
0.76 |
|
| 2004 |
Puig M, Cáceres M, Ruiz A. Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA. Proceedings of the National Academy of Sciences of the United States of America. 101: 9013-8. PMID 15184654 DOI: 10.1073/pnas.0403090101 |
0.685 |
|
| 2003 |
Cáceres M, Lachuer J, Zapala MA, Redmond JC, Kudo L, Geschwind DH, Lockhart DJ, Preuss TM, Barlow C. Elevated gene expression levels distinguish human from non-human primate brains. Proceedings of the National Academy of Sciences of the United States of America. 100: 13030-5. PMID 14557539 DOI: 10.1073/Pnas.2135499100 |
0.628 |
|
| 2003 |
Negre B, Ranz JM, Casals F, Cáceres M, Ruiz A. A new split of the Hox gene complex in Drosophila: relocation and evolution of the gene labial. Molecular Biology and Evolution. 20: 2042-54. PMID 12949134 DOI: 10.1093/Molbev/Msg238 |
0.687 |
|
| 2003 |
Casals F, Cáceres M, Ruiz A. The foldback-like transposon Galileo is involved in the generation of two different natural chromosomal inversions of Drosophila buzzatii. Molecular Biology and Evolution. 20: 674-85. PMID 12679549 DOI: 10.1093/Molbev/Msg070 |
0.693 |
|
| 1997 |
Cáceres M, Barbadilla A, Ruiz A. INVERSION LENGTH AND BREAKPOINT DISTRIBUTION IN THE DROSOPHILA BUZZATII SPECIES COMPLEX: IS INVERSION LENGTH A SELECTED TRAIT? Evolution; International Journal of Organic Evolution. 51: 1149-1155. PMID 28565492 DOI: 10.1111/J.1558-5646.1997.Tb03962.X |
0.695 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2022 |
Degenhardt F, Ellinghaus D, Juzenas S, Lerga-Jaso J, Wendorff M, Maya-Miles D, Uellendahl-Werth F, ElAbd H, Rühlemann MC, Arora J, Özer O, Lenning OB, Myhre R, Vadla MS, Wacker EM, et al. Detailed stratified GWAS analysis for severe COVID-19 in four European populations. Human Molecular Genetics. PMID 35848942 DOI: 10.1093/hmg/ddac158 |
0.288 |
|
| 2013 |
Bassaganyas L, Riveira-Muñoz E, García-Aragonés M, González JR, Cáceres M, Armengol L, Estivill X. Worldwide population distribution of the common LCE3C-LCE3B deletion associated with psoriasis and other autoimmune disorders. Bmc Genomics. 14: 261. PMID 23594316 DOI: 10.1186/1471-2164-14-261 |
0.281 |
|
| 2013 |
Cagliani R, Guerini FR, Rubio-Acero R, Baglio F, Forni D, Agliardi C, Griffanti L, Fumagalli M, Pozzoli U, Riva S, Calabrese E, Sikora M, Casals F, Comi GP, Bresolin N, et al. Long-standing balancing selection in the THBS4 gene: influence on sex-specific brain expression and gray matter volumes in Alzheimer disease. Human Mutation. 34: 743-53. PMID 23420636 DOI: 10.1002/Humu.22301 |
0.276 |
|
| 2012 |
Cáceres A, Sindi SS, Raphael BJ, Cáceres M, González JR. Identification of polymorphic inversions from genotypes. Bmc Bioinformatics. 13: 28. PMID 22321652 DOI: 10.1186/1471-2105-13-28 |
0.27 |
|
| 2012 |
Cagliani R, Riva S, Marino C, Fumagalli M, D'Angelo MG, Riva V, Comi GP, Pozzoli U, Forni D, Cáceres M, Bresolin N, Clerici M, Sironi M. Variants in SNAP25 are targets of natural selection and influence verbal performances in women. Cellular and Molecular Life Sciences : Cmls. 69: 1705-15. PMID 22193912 DOI: 10.1007/s00018-011-0896-y |
0.265 |
|
| 2014 |
González JR, Cáceres A, Esko T, Cuscó I, Puig M, Esnaola M, Reina J, Siroux V, Bouzigon E, Nadif R, Reinmaa E, Milani L, Bustamante M, Jarvis D, Antó JM, et al. A common 16p11.2 inversion underlies the joint susceptibility to asthma and obesity. American Journal of Human Genetics. 94: 361-72. PMID 24560518 DOI: 10.1016/J.Ajhg.2014.01.015 |
0.191 |
|
| 2006 |
Penkowa M, Cáceres M, Borup R, Nielsen FC, Poulsen CB, Quintana A, Molinero A, Carrasco J, Florit S, Giralt M, Hidalgo J. Novel roles for metallothionein-I + II (MT-I + II) in defense responses, neurogenesis, and tissue restoration after traumatic brain injury: insights from global gene expression profiling in wild-type and MT-I + II knockout mice. Journal of Neuroscience Research. 84: 1452-74. PMID 16941634 DOI: 10.1002/Jnr.21043 |
0.19 |
|
| 2014 |
Lucas-Lledó JI, Vicente-Salvador D, Aguado C, Cáceres M. Population genetic analysis of bi-allelic structural variants from low-coverage sequence data with an expectation-maximization algorithm. Bmc Bioinformatics. 15: 163. PMID 24884587 DOI: 10.1186/1471-2105-15-163 |
0.182 |
|
| 2005 |
Poulsen CB, Penkowa M, Borup R, Nielsen FC, Cáceres M, Quintana A, Molinero A, Carrasco J, Giralt M, Hidalgo J. Brain response to traumatic brain injury in wild-type and interleukin-6 knockout mice: a microarray analysis. Journal of Neurochemistry. 92: 417-32. PMID 15663489 DOI: 10.1111/J.1471-4159.2004.02877.X |
0.16 |
|
| 2015 |
Cáceres M. Structural variants, much ado about nothing? Briefings in Functional Genomics. 14: 303-4. PMID 26392468 DOI: 10.1093/bfgp/elv031 |
0.101 |
|
| 2009 |
Navarro F, Gutman D, Meire E, Cáceres M, Rigoutsos I, Bentwich Z, Lieberman J. miR-34a contributes to megakaryocytic differentiation of K562 cells independently of p53. Blood. 114: 2181-92. PMID 19584398 DOI: 10.1182/Blood-2009-02-205062 |
0.057 |
|
| 2004 |
RodrÃguez-Carranza S, Cáceres M, Aguilar-Salinas CA, Gómez-Pérez FJ, Herrera MF, Pantoja JP, Rull JA. Localization of parathyroid adenomas by (99m)Tc-sestamibi scanning: upper neck versus lower neck lesions. Endocrine Practice : Official Journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists. 10: 472-7. PMID 16033718 DOI: 10.4158/EP.10.6.472 |
0.023 |
|
| Hide low-probability matches. |