Daniel K Wójcik - Publications

Affiliations: 
2003- Department of Neurophysiology Nencki Institute of Experimental Biology, Warsaw, Poland 
Area:
Neuroinformatics, Computational Neuroscience, statistical physics
Website:
http://dwojcik.pl/

49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chintaluri C, Bejtka M, Średniawa W, Czerwiński M, Dzik JM, Jędrzejewska-Szmek J, Wójcik DK. kCSD-python, reliable current source density estimation with quality control. Plos Computational Biology. 20: e1011941. PMID 38484020 DOI: 10.1371/journal.pcbi.1011941  0.796
2023 Stefaniuk M, Pawłowska M, Barański M, Nowicka K, Zieliński Z, Bijoch Ł, Legutko D, Majka P, Bednarek S, Jermakow N, Wójcik D, Kaczmarek L. Global brain c-Fos profiling reveals major functional brain networks rearrangements after alcohol reexposure. Neurobiology of Disease. 178: 106006. PMID 36682503 DOI: 10.1016/j.nbd.2023.106006  0.756
2021 Theodoni P, Majka P, Reser DH, Wójcik DK, Rosa MGP, Wang XJ. Structural Attributes and Principles of the Neocortical Connectome in the Marmoset Monkey. Cerebral Cortex (New York, N.Y. : 1991). PMID 34274966 DOI: 10.1093/cercor/bhab191  0.803
2021 Chintaluri C, Bejtka M, Średniawa W, Czerwiński M, Dzik JM, Jędrzejewska-Szmek J, Kondrakiewicz K, Kublik E, Wójcik DK. What we can and what we cannot see with extracellular multielectrodes. Plos Computational Biology. 17: e1008615. PMID 33989280 DOI: 10.1371/journal.pcbi.1008615  0.774
2021 Średniawa W, Wróbel J, Kublik E, Wójcik DK, Whittington MA, Hunt MJ. Network and synaptic mechanisms underlying high frequency oscillations in the rat and cat olfactory bulb under ketamine-xylazine anesthesia. Scientific Reports. 11: 6390. PMID 33737621 DOI: 10.1038/s41598-021-85705-5  0.784
2020 Majka P, Bednarek S, Chan JM, Jermakow N, Liu C, Saworska G, Worthy KH, Silva AC, Wójcik DK, Rosa MGP. Histology-Based Average Template of the Marmoset Cortex With Probabilistic Localization of Cytoarchitectural Areas. Neuroimage. 117625. PMID 33301940 DOI: 10.1016/j.neuroimage.2020.117625  0.777
2020 Wróbel J, Średniawa W, Jurkiewicz G, Żygierewicz J, Wójcik DK, Whittington MA, Hunt MJ. Nasal respiration is necessary for ketamine-dependent high frequency network oscillations and behavioral hyperactivity in rats. Scientific Reports. 10: 18981. PMID 33149202 DOI: 10.1038/s41598-020-75641-1  0.774
2020 Majka P, Bai S, Bakola S, Bednarek S, Chan JM, Jermakow N, Passarelli L, Reser DH, Theodoni P, Worthy KH, Wang XJ, Wójcik DK, Mitra PP, Rosa MGP. Open access resource for cellular-resolution analyses of corticocortical connectivity in the marmoset monkey. Nature Communications. 11: 1133. PMID 32111833 DOI: 10.1038/S41467-020-14858-0  0.774
2020 Lacik J, Koudelka V, Kuratko D, Raida Z, Wojcik DK, Mikulasek T, Vanek J, Jiricek S, Vejmola C. Rat Head Phantom for Testing of Electroencephalogram Source Localization Techniques Ieee Access. 8: 106735-106745. DOI: 10.1109/Access.2020.3000581  0.371
2019 Sterratt D, Wójcik DK. Decision letter: NetPyNE, a tool for data-driven multiscale modeling of brain circuits Elife. DOI: 10.7554/Elife.44494.015  0.327
2018 Majka P, Rosa MGP, Bai S, Chan JM, Huo BX, Jermakow N, Lin MK, Takahashi YS, Wolkowicz IH, Worthy KH, Rajan R, Reser DH, Wójcik DK, Okano H, Mitra PP. Unidirectional monosynaptic connections from auditory areas to the primary visual cortex in the marmoset monkey. Brain Structure & Function. PMID 30288557 DOI: 10.1007/S00429-018-1764-4  0.78
2018 Hunt MJ, Adams NE, Średniawa W, Wójcik DK, Simon A, Kasicki S, Whittington MA. The olfactory bulb is a source of high-frequency oscillations (130-180 Hz) associated with a subanesthetic dose of ketamine in rodents. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology. PMID 30140046 DOI: 10.1038/S41386-018-0173-Y  0.788
2018 Denker M, Einevoll G, Franke F, Grün S, Hagen E, Kerr J, Nawrot M, Ness T, Ritz R, Smith L, Wachtler T, Wojcik D. 1st INCF Workshop on Validation of Analysis Methods F1000research. 7. DOI: 10.7490/F1000Research.1115887.1  0.547
2017 Majka P, Chlodzinska N, Turlejski K, Banasik T, Djavadian RL, Węglarz WP, Wójcik DK. A three-dimensional stereotaxic atlas of the gray short-tailed opossum (Monodelphis domestica) brain. Brain Structure & Function. PMID 29214509 DOI: 10.1007/S00429-017-1540-X  0.783
2017 Cserpán D, Meszéna D, Wittner L, Tóth K, Ulbert I, Somogyvári Z, Wojcik DK. Revealing the distribution of transmembrane currents along the dendritic tree of a neuron from extracellular recordings. Elife. 6. PMID 29148974 DOI: 10.7554/Elife.29384  0.387
2017 Næss S, Chintaluri C, Ness TV, Dale AM, Einevoll GT, Wójcik DK. Corrected Four-Sphere Head Model for EEG Signals. Frontiers in Human Neuroscience. 11: 490. PMID 29093671 DOI: 10.3389/Fnhum.2017.00490  0.794
2016 Głąbska H, Chintaluri C, Wójcik DK. Collection of Simulated Data from a Thalamocortical Network Model. Neuroinformatics. PMID 27837401 DOI: 10.1007/S12021-016-9319-4  0.774
2016 Sharpee TO, Destexhe A, Kawato M, Sekulić V, Skinner FK, Wójcik DK, Chintaluri C, Cserpán D, Somogyvári Z, Kim JK, Kilpatrick ZP, Bennett MR, Josić K, Elices I, Arroyo D, et al. 25th Annual Computational Neuroscience Meeting: CNS-2016 Bmc Neuroscience. 17: 54. PMID 27534393 DOI: 10.1186/S12868-016-0283-6  0.745
2016 Majka P, Chaplin TA, Yu HH, Tolpygo A, Mitra PP, Wójcik DK, Rosa MG. Towards a comprehensive atlas of cortical connections in a primate brain: Mapping tracer injection studies of the common marmoset into a reference digital template. The Journal of Comparative Neurology. PMID 27099164 DOI: 10.1002/Cne.24023  0.806
2016 Głąbska HT, Norheim E, Devor A, Dale AM, Einevoll GT, Wójcik DK. Generalized Laminar Population Analysis (gLPA) for Interpretation of Multielectrode Data from Cortex. Frontiers in Neuroinformatics. 10: 1. PMID 26834620 DOI: 10.3389/Fninf.2016.00001  0.796
2015 Majka P, Wójcik DK. Possum-A Framework for Three-Dimensional Reconstruction of Brain Images from Serial Sections. Neuroinformatics. PMID 26687079 DOI: 10.1007/S12021-015-9286-1  0.789
2015 Ray S, Chintaluri C, Bhalla US, Wójcik DK. NSDF: Neuroscience Simulation Data Format. Neuroinformatics. PMID 26585711 DOI: 10.1007/S12021-015-9282-5  0.789
2015 Zakiewicz IM, Majka P, Wójcik DK, Bjaalie JG, Leergaard TB. Three-Dimensional Histology Volume Reconstruction of Axonal Tract Tracing Data: Exploring Topographical Organization in Subcortical Projections from Rat Barrel Cortex. Plos One. 10: e0137571. PMID 26398192 DOI: 10.1371/Journal.Pone.0137571  0.79
2015 Ness TV, Chintaluri C, Potworowski J, ??ski S, G??bska H, Wójcik DK, Einevoll GT. Modelling and Analysis of Electrical Potentials Recorded in Microelectrode Arrays (MEAs). Neuroinformatics. PMID 25822810 DOI: 10.1007/S12021-015-9265-6  0.807
2015 Chintaluri C, Wójcik DK. A novel method for spatial source localization using ECoG and SEEG recordings in human epilepsy patients Bmc Neuroscience. 16. DOI: 10.1186/1471-2202-16-S1-P286  0.815
2014 Głąbska H, Potworowski J, Łęski S, Wójcik DK. Independent components of neural activity carry information on individual populations. Plos One. 9: e105071. PMID 25153730 DOI: 10.1371/Journal.Pone.0105071  0.772
2013 Knapska E, Lioudyno V, Kiryk A, Mikosz M, Górkiewicz T, Michaluk P, Gawlak M, Chaturvedi M, Mochol G, Balcerzyk M, Wojcik DK, Wilczynski GM, Kaczmarek L. Reward learning requires activity of matrix metalloproteinase-9 in the central amygdala. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 33: 14591-600. PMID 24005309 DOI: 10.1523/Jneurosci.5239-12.2013  0.757
2013 Rogala J, Waleszczyk WJ, Lęski S, Wróbel A, Wójcik DK. Reciprocal inhibition and slow calcium decay in perigeniculate interneurons explain changes of spontaneous firing of thalamic cells caused by cortical inactivation. Journal of Computational Neuroscience. 34: 461-76. PMID 23150147 DOI: 10.1007/S10827-012-0430-8  0.785
2013 Rogala J, Waleszczyk WJ, Wróbel A, Wójcik DK. Effect of cortex inactivation on spontaneous activity of cells in perigeniculate and dorsal lateral geniculate nuclei Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P418  0.797
2013 Chintaluri HC, Głąbska H, Ness TB, Einevoll GT, Wójcik DK. Realistic simulations of local field potentials in a slice Bmc Neuroscience. 14. DOI: 10.1186/1471-2202-14-S1-P417  0.641
2012 Majka P, Kublik E, Furga G, Wójcik DK. Common atlas format and 3D brain atlas reconstructor: infrastructure for constructing 3D brain atlases. Neuroinformatics. 10: 181-97. PMID 22227717 DOI: 10.1007/S12021-011-9138-6  0.793
2012 Potworowski J, Jakuczun W, Lȩski S, Wójcik D. Kernel current source density method. Neural Computation. 24: 541-75. PMID 22091662 DOI: 10.1162/Neco_A_00236  0.8
2012 Łęski S, Głąbska H, Potworowski J, Wójcik DK. Synaptic activations of neuronal populations in the thalamocortical loop from LFP using kCSD and ICA Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-P11  0.811
2011 Kiryk A, Mochol G, Filipkowski RK, Wawrzyniak M, Lioudyno V, Knapska E, Gorkiewicz T, Balcerzyk M, Leski S, Leuven FV, Lipp HP, Wojcik DK, Kaczmarek L. Cognitive abilities of Alzheimer's disease transgenic mice are modulated by social context and circadian rhythm. Current Alzheimer Research. 8: 883-92. PMID 22171952 DOI: 10.2174/156720511798192745  0.751
2011 Hunt MJ, Falinska M, Łeski S, Wójcik DK, Kasicki S. Differential effects produced by ketamine on oscillatory activity recorded in the rat hippocampus, dorsal striatum and nucleus accumbens. Journal of Psychopharmacology (Oxford, England). 25: 808-21. PMID 20413405 DOI: 10.1177/0269881110362126  0.784
2011 Potworowski J, Głąbska H, Łęski S, Wójcik DK. Extracting activity of individual cell populations from multielectrode recordings Bmc Neuroscience. 12: P374. DOI: 10.1186/1471-2202-12-S1-P374  0.819
2011 Rogala J, Waleszczyk W, Wróbel A, Wójcik DK. Cortical modulation of neuronal activity in the cat's lateral geniculate and perigeniculate nuclei: a modeling study Bmc Neuroscience. 12. DOI: 10.1186/1471-2202-12-S1-P373  0.801
2010 Mochol G, Wójcik DK, Wypych M, Wróbel A, Waleszczyk WJ. Variability of visual responses of superior colliculus neurons depends on stimulus velocity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 3199-209. PMID 20203179 DOI: 10.1523/Jneurosci.3250-09.2010  0.777
2010 Lęski S, Kublik E, Swiejkowski DA, Wróbel A, Wójcik DK. Extracting functional components of neural dynamics with Independent Component Analysis and inverse Current Source Density. Journal of Computational Neuroscience. 29: 459-73. PMID 20033271 DOI: 10.1007/S10827-009-0203-1  0.809
2010 Wójcik DK, Leski S. Current source density reconstruction from incomplete data. Neural Computation. 22: 48-60. PMID 19764876 DOI: 10.1162/Neco.2009.07-08-831  0.768
2010 Kiryk-Jaskiewicz A, Mochol G, Filipkowski RK, Wawrzyniak M, Lioudyno V, Knapska E, Leski S, Van Leuven F, Lipp H, Wojcik DK, Kaczmarek L. P1-145: Cognitive abilities of Alzheimer transgenic mice as revealed by the IntelliCage system Alzheimer's & Dementia. 6: S216-S216. DOI: 10.1016/J.Jalz.2010.05.694  0.749
2009 Wójcik DK, Mochol G, Jakuczun W, Wypych M, Waleszczyk WJ. Direct estimation of inhomogeneous Markov interval models of spike trains. Neural Computation. 21: 2105-13. PMID 19538090 DOI: 10.1162/Neco.2009.07-08-828  0.79
2008 Leski S, Wójcik DK. Inferring coupling strength from event-related dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 041918. PMID 18999466 DOI: 10.1186/1471-2202-10-S1-P242  0.732
2007 Łeski S, Wójcik DK, Tereszczuk J, Swiejkowski DA, Kublik E, Wróbel A. Inverse current-source density method in 3D: reconstruction fidelity, boundary effects, and influence of distant sources. Neuroinformatics. 5: 207-22. PMID 18040890 DOI: 10.1007/S12021-007-9000-Z  0.796
2005 Jakuczun W, Kublik E, Wójcik DK, Wróbel A. Local classifiers for evoked potentials recorded from behaving rats. Acta Neurobiologiae Experimentalis. 65: 425-34. PMID 16366395  0.682
2004 Wójcik DK, Dorfman JR. Crossover from diffusive to ballistic transport in periodic quantum maps Physica D: Nonlinear Phenomena. 187: 223-243. DOI: 10.1016/J.Physd.2003.09.012  0.519
2003 Wójcik DK, Dorfman JR. Diffusive-ballistic crossover in 1D quantum walks. Physical Review Letters. 90: 230602. PMID 12857245 DOI: 10.1103/Physrevlett.90.230602  0.513
2002 Wójcik DK, Dorfman JR. Quantum multibaker maps: extreme quantum regime. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 66: 036110. PMID 12366187 DOI: 10.1103/Physreve.66.036110  0.524
1970 Wójcik D, Kublik E, Łęski S, Świejkowski D, Wróbel A. Extraction of functional components from multichannel LFP data Frontiers in Neuroinformatics. DOI: 10.3389/Conf.Neuro.11.2009.08.060  0.651
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