Cristian T Badea - Publications

Affiliations: 
Duke University, Durham, NC 
Area:
radiology, computed tomography, biomedical imaging, micro-CT

145 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Moon HS, Mahzarnia A, Stout J, Anderson RJ, Badea CT, Badea A. Feature attention graph neural network for estimating brain age and identifying important neural connections in mouse models of genetic risk for Alzheimer's disease. Biorxiv : the Preprint Server For Biology. PMID 38168445 DOI: 10.1101/2023.12.13.571574  0.494
2023 Allphin AJ, Mahzarnia A, Clark DP, Qi Y, Han ZY, Bhandari P, Ghaghada KB, Badea A, Badea CT. Advanced photon counting CT imaging pipeline for cardiac phenotyping of apolipoprotein E mouse models. Plos One. 18: e0291733. PMID 37796905 DOI: 10.1371/journal.pone.0291733  0.781
2023 Gil CJ, Evans CJ, Li L, Allphin AJ, Tomov ML, Jin L, Vargas M, Hwang B, Wang J, Putaturo V, Kabboul G, Alam AS, Nandwani RK, Wu Y, Sushmit A, ... Badea CT, et al. Leveraging 3d Bioprinting And Photon-Counting Computed Tomography to Enable Noninvasive Quantitative Tracking of Multifunctional Tissue Engineered Constructs. Advanced Healthcare Materials. e2302271. PMID 37709282 DOI: 10.1002/adhm.202302271  0.605
2023 Nadkarni R, Clark DP, Allphin AJ, Badea CT. A Deep Learning Approach for Rapid and Generalizable Denoising of Photon-Counting Micro-CT Images. Tomography (Ann Arbor, Mich.). 9: 1286-1302. PMID 37489470 DOI: 10.3390/tomography9040102  0.793
2023 Clark DP, Badea CT. MCR toolkit: A GPU-based toolkit for multi-channel reconstruction of preclinical and clinical x-ray CT data. Medical Physics. PMID 37285215 DOI: 10.1002/mp.16532  0.809
2023 Moore SM, Quirk JD, Lassiter AW, Laforest R, Ayers GD, Badea CT, Fedorov AY, Kinahan PE, Holbrook M, Larson PEZ, Sriram R, Chenevert TL, Malyarenko D, Kurhanewicz J, Houghton AM, et al. Co-Clinical Imaging Metadata Information (CIMI) for Cancer Research to Promote Open Science, Standardization, and Reproducibility in Preclinical Imaging. Tomography (Ann Arbor, Mich.). 9: 995-1009. PMID 37218941 DOI: 10.3390/tomography9030081  0.6
2023 Gammon ST, Cohen AS, Lehnert AL, Sullivan DC, Malyarenko D, Manning HC, Hormuth DA, Daldrup-Link HE, An H, Quirk JD, Shoghi K, Pagel MD, Kinahan PE, Miyaoka RS, Houghton AM, ... Badea CT, et al. An Online Repository for Pre-Clinical Imaging Protocols (PIPs). Tomography (Ann Arbor, Mich.). 9: 750-758. PMID 37104131 DOI: 10.3390/tomography9020060  0.625
2023 Schwartz FR, Clark DP, Rigiroli F, Kalisz K, Wildman-Tobriner B, Thomas S, Wilson J, Badea CT, Marin D. Evaluation of the impact of a novel denoising algorithm on image quality in dual-energy abdominal CT of obese patients. European Radiology. PMID 37083742 DOI: 10.1007/s00330-023-09644-7  0.776
2023 Allphin AJ, Clark DP, Thüring T, Bhandari P, Ghaghada KB, Badea CT. Micro-CT imaging of multiple K-edge elements using GaAs and CdTe photon counting detectors. Physics in Medicine and Biology. PMID 36963115 DOI: 10.1088/1361-6560/acc77e  0.809
2023 Peehl DM, Badea CT, Chenevert TL, Daldrup-Link HE, Ding L, Dobrolecki LE, Houghton AM, Kinahan PE, Kurhanewicz J, Lewis MT, Li S, Luker GD, Ma CX, Manning HC, Mowery YM, et al. Animal Models and Their Role in Imaging-Assisted Co-Clinical Trials. Tomography (Ann Arbor, Mich.). 9: 657-680. PMID 36961012 DOI: 10.3390/tomography9020053  0.564
2022 Patel R, Mowery YM, Qi Y, Bassil AM, Holbrook M, Xu E, Hong CS, Himes JE, Williams N, Everitt JI, Ma Y, Luo L, Selitsky SR, Modliszewski JL, Gao J, ... Badea CT, et al. Neoadjuvant radiation therapy and surgery improves metastasis-free survival over surgery alone in a primary mouse model of soft-tissue sarcoma. Molecular Cancer Therapeutics. PMID 36162051 DOI: 10.1158/1535-7163.MCT-21-0991  0.528
2022 Nadkarni R, Allphin A, Clark DP, Badea CT. Material decomposition from photon-counting CT using a convolutional neural network and energy-integrating CT training labels. Physics in Medicine and Biology. PMID 35767986 DOI: 10.1088/1361-6560/ac7d34  0.786
2022 Moon HS, Heffron L, Mahzarnia A, Obeng-Gyasi B, Holbrook M, Badea CT, Feng W, Badea A. Automated multimodal segmentation of acute ischemic stroke lesions on clinical MR images. Magnetic Resonance Imaging. 92: 45-57. PMID 35688400 DOI: 10.1016/j.mri.2022.06.001  0.555
2022 Allphin AJ, Mowery YM, Lafata KJ, Clark DP, Bassil AM, Castillo R, Odhiambo D, Holbrook MD, Ghaghada KB, Badea CT. Photon Counting CT and Radiomic Analysis Enables Differentiation of Tumors Based on Lymphocyte Burden. Tomography (Ann Arbor, Mich.). 8: 740-753. PMID 35314638 DOI: 10.3390/tomography8020061  0.797
2021 Holbrook MD, Clark DP, Patel R, Qi Y, Bassil AM, Mowery YM, Badea CT. Detection of Lung Nodules in Micro-CT Imaging Using Deep Learning. Tomography (Ann Arbor, Mich.). 7: 358-372. PMID 34449750 DOI: 10.3390/tomography7030032  0.776
2021 Blocker SJ, Cook J, Mowery YM, Everitt JI, Qi Y, Hornburg KJ, Cofer GP, Zapata F, Bassil AM, Badea CT, Kirsch DG, Johnson GA. Ex Vivo MR Histology and Cytometric Feature Mapping Connect Three-dimensional in Vivo MR Images to Two-dimensional Histopathologic Images of Murine Sarcomas. Radiology. Imaging Cancer. 3: e200103. PMID 34018846 DOI: 10.1148/rycan.2021200103  0.6
2021 Schwartz FR, Clark DP, Ding Y, Ramirez-Giraldo JC, Badea CT, Marin D. Evaluating renal lesions using deep-learning based extension of dual-energy FoV in dual-source CT-A retrospective pilot study. European Journal of Radiology. 139: 109734. PMID 33933837 DOI: 10.1016/j.ejrad.2021.109734  0.768
2021 Lee CL, Lee J, Daniel AR, Holbrook M, Hasapis S, Wright AO, Brownstein J, Da Silva Campos L, Ma Y, Abraham D, Badea CT, Kirsch DG. Characterization of cardiovascular injury in mice following partial-heart irradiation with clinically relevant dose and fractionation. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 33545252 DOI: 10.1016/j.radonc.2021.01.023  0.536
2020 Badea A, Schmalzigaug R, Kim W, Bonner P, Ahmed U, Johnson GA, Cofer G, Foster M, Anderson RJ, Badea C, Premont RT. Microcephaly with altered cortical layering in GIT1 deficiency revealed by quantitative neuroimaging. Magnetic Resonance Imaging. PMID 33010377 DOI: 10.1016/j.mri.2020.09.023  0.529
2020 Shoghi KI, Badea CT, Blocker SJ, Chenevert TL, Laforest R, Lewis MT, Luker GD, Manning HC, Marcus DS, Mowery YM, Pickup S, Richmond A, Ross BD, Vilgelm AE, Yankeelov TE, et al. Co-Clinical Imaging Resource Program (CIRP): Bridging the Translational Divide to Advance Precision Medicine. Tomography (Ann Arbor, Mich.). 6: 273-287. PMID 32879897 DOI: 10.18383/j.tom.2020.00023  0.574
2020 Holbrook M, Clark DP, Badea CT. Dual source hybrid spectral micro-CT using an energy-integrating and a photon-counting detector. Physics in Medicine and Biology. PMID 32702686 DOI: 10.1088/1361-6560/Aba8B2  0.838
2020 Clark DP, Schwartz FR, Marin D, Ramirez-Giraldo JC, Badea CT. Deep learning based spectral extrapolation for dual-source, dual-energy x-ray computed tomography. Medical Physics. PMID 32531114 DOI: 10.1002/Mp.14324  0.821
2020 Blocker SJ, Holbrook MD, Mowery YM, Sullivan DC, Badea CT. The impact of respiratory gating on improving volume measurement of murine lung tumors in micro-CT imaging. Plos One. 15: e0225019. PMID 32097413 DOI: 10.1371/Journal.Pone.0225019  0.702
2020 Neamţu B, Belea A, Popa F, Ware E, Marinca T, Vintiloiu I, Badea C, Pszola M, Nasui M. Properties of soft magnetic composites based on Fe fibres coated with SiO2 by hydrothermal method Journal of Alloys and Compounds. 826: 154222. DOI: 10.1016/j.jallcom.2020.154222  0.482
2019 Clark DP, Holbrook M, Lee CL, Badea CT. Photon-counting cine-cardiac CT in the mouse. Plos One. 14: e0218417. PMID 31536493 DOI: 10.1371/Journal.Pone.0218417  0.835
2019 Lee CL, Daniel AR, Holbrook M, Brownstein J, Da Silva Campos L, Hasapis S, Ma Y, Borst L, Badea CT, Kirsch DG. Sensitization of Vascular Endothelial Cells to Ionizing Radiation Promotes the Development of Delayed Intestinal Injury in Mice. Radiation Research. PMID 31265788 DOI: 10.1667/Rr15371.1  0.585
2019 Blocker SJ, Mowery YM, Holbrook MD, Qi Y, Kirsch DG, Johnson GA, Badea CT. Bridging the translational gap: Implementation of multimodal small animal imaging strategies for tumor burden assessment in a co-clinical trial. Plos One. 14: e0207555. PMID 30958825 DOI: 10.1371/Journal.Pone.0207555  0.697
2019 Holbrook M, Clark DP, Badea CT. Overcoming detector limitations of x-ray photon counting for preclinical microcomputed tomography. Journal of Medical Imaging (Bellingham, Wash.). 6: 011004. PMID 30840718 DOI: 10.1117/1.Jmi.6.1.011004  0.825
2019 Badea CT, Clark DP, Holbrook M, Srivastava M, Mowery Y, Ghaghada KB. Functional imaging of tumor vasculature using iodine and gadolinium-based nanoparticle contrast agents: a comparison of spectral micro-CT using energy integrating and photon counting detectors. Physics in Medicine and Biology. PMID 30708357 DOI: 10.1088/1361-6560/Ab03E2  0.797
2018 Ma Z, Yu YR, Badea CT, Kovacs JJ, Xiong X, Comhair S, Piantadosi CA, Rajagopal S. Vascular Endothelial Growth Factor Receptor 3 Regulates Endothelial Function Through β-Arrestin 1. Circulation. PMID 30586762 DOI: 10.1161/Circulationaha.118.034961  0.537
2018 Ashton JR, Gottlin EB, Patz EF, West JL, Badea CT. A comparative analysis of EGFR-targeting antibodies for gold nanoparticle CT imaging of lung cancer. Plos One. 13: e0206950. PMID 30408128 DOI: 10.1371/Journal.Pone.0206950  0.805
2018 Ashton JR, Castle KD, Qi Y, Kirsch DG, West JL, Badea CT. Dual-Energy CT Imaging of Tumor Liposome Delivery After Gold Nanoparticle-Augmented Radiation Therapy. Theranostics. 8: 1782-1797. PMID 29556356 DOI: 10.7150/Thno.22621  0.815
2017 Holbrook M, Clark DP, Badea CT. Low-dose 4D cardiac imaging in small animals using dual source micro-CT. Physics in Medicine and Biology. PMID 29148430 DOI: 10.1088/1361-6560/Aa9B45  0.767
2017 Clark DP, Badea CT. Hybrid spectral CT reconstruction. Plos One. 12: e0180324. PMID 28683124 DOI: 10.1371/Journal.Pone.0180324  0.798
2017 Clark DP, Badea CT. Localized and efficient cardiac CT reconstruction Proceedings of Spie. 10132. DOI: 10.1117/12.2254700  0.808
2017 Clark DP, Badea CT. Low-dose 4D myocardial perfusion with x-ray micro-CT Proceedings of Spie. 10132. DOI: 10.1117/12.2254548  0.829
2017 Clark DP, Badea CT. A data-driven regularization strategy for statistical CT reconstruction Proceedings of Spie. 10132. DOI: 10.1117/12.2254484  0.746
2016 Touch M, Clark DP, Barber W, Badea CT. A neural network-based method for spectral distortion correction in photon counting x-ray CT. Physics in Medicine and Biology. 61: 6132-6153. PMID 27469292 DOI: 10.1088/0031-9155/61/16/6132  0.818
2016 Clark DP, Badea CT. Joint regularization for spectrooral CT reconstruction Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9783. DOI: 10.1117/12.2217091  0.783
2016 Touch M, Clark DP, Barber W, Badea CT. Novel approaches to address spectral distortions in photon counting x-ray CT using artificial neural networks Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9783. DOI: 10.1117/12.2217037  0.792
2016 Ashton JR, Hoye J, Deland K, Whitley M, Qi Y, Moding E, Kirsch DG, West J, Badea CT. A dual energy CT study on vascular effects of gold nanoparticles in radiation therapy Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9788. DOI: 10.1117/12.2217012  0.809
2016 Clark DP, Badea CT. Resolution-enhancing hybrid, spectral CT reconstruction Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9783. DOI: 10.1117/12.2216935  0.824
2015 Ashton JR, West JL, Badea CT. In vivo small animal micro-CT using nanoparticle contrast agents. Frontiers in Pharmacology. 6: 256. PMID 26581654 DOI: 10.3389/Fphar.2015.00256  0.84
2015 Clark DP, Lee CL, Kirsch DG, Badea CT. Spectrotemporal CT data acquisition and reconstruction at low dose. Medical Physics. 42: 6317. PMID 26520724 DOI: 10.1118/1.4931407  0.838
2015 Borg JS, Vu MA, Badea C, Badea A, Johnson GA, Dzirasa K. Localization of Metal Electrodes in the Intact Rat Brain Using Registration of 3D Microcomputed Tomography Images to a Magnetic Resonance Histology Atlas. Eneuro. 2. PMID 26322331 DOI: 10.1523/ENEURO.0017-15.2015  0.566
2015 Liu Y, Ashton JR, Moding EJ, Yuan H, Register JK, Fales AM, Choi J, Whitley MJ, Zhao X, Qi Y, Ma Y, Vaidyanathan G, Zalutsky MR, Kirsch DG, Badea CT, et al. A Plasmonic Gold Nanostar Theranostic Probe for In Vivo Tumor Imaging and Photothermal Therapy. Theranostics. 5: 946-60. PMID 26155311 DOI: 10.7150/Thno.11974  0.83
2015 Liu Y, Badea C, Mistry N, D'souza W. SU-C-303-07: Influence of Image Registration Algorithms and Noise Levels On the Accuracy of Fractional Regional Ventilation Medical Physics. 42: 3198-3199. DOI: 10.1118/1.4923824  0.641
2015 Clark DP, Badea CT. Rank-sparsity constrained atlas construction and phenotyping Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9413. DOI: 10.1117/12.2081415  0.764
2015 Clark DP, Lee CL, Kirsch DG, Badea CT. Rank-sparsity constrained, spectro-temporal reconstruction for retrospectively gated, dynamic CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9412. DOI: 10.1117/12.2081379  0.815
2015 Clark DP, Badea CT. Spectral deblurring: An algorithm for high-resolution, hybrid spectral CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9412. DOI: 10.1117/12.2081249  0.815
2015 Clark DP, Touch M, Barber W, Badea CT. Simultaneous imaging of multiple contrast agents using full-spectrum micro-CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9412. DOI: 10.1117/12.2081049  0.828
2014 Clark DP, Badea CT. Spectral diffusion: an algorithm for robust material decomposition of spectral CT data. Physics in Medicine and Biology. 59: 6445-66. PMID 25296173 DOI: 10.1088/0031-9155/59/21/6445  0.783
2014 Clark DP, Badea CT. Micro-CT of rodents: state-of-the-art and future perspectives. Physica Medica : Pm : An International Journal Devoted to the Applications of Physics to Medicine and Biology : Official Journal of the Italian Association of Biomedical Physics (Aifb). 30: 619-34. PMID 24974176 DOI: 10.1016/J.Ejmp.2014.05.011  0.837
2014 Ashton JR, Befera N, Clark D, Qi Y, Mao L, Rockman HA, Johnson GA, Badea CT. Anatomical and functional imaging of myocardial infarction in mice using micro-CT and eXIA 160 contrast agent. Contrast Media & Molecular Imaging. 9: 161-8. PMID 24523061 DOI: 10.1002/Cmmi.1557  0.838
2014 Lee CL, Min H, Befera N, Clark D, Qi Y, Das S, Johnson GA, Badea CT, Kirsch DG. Assessing cardiac injury in mice with dual energy-microCT, 4D-microCT, and microSPECT imaging after partial heart irradiation. International Journal of Radiation Oncology, Biology, Physics. 88: 686-93. PMID 24521682 DOI: 10.1016/J.Ijrobp.2013.11.238  0.783
2014 Ashton JR, Clark DP, Moding EJ, Ghaghada K, Kirsch DG, West JL, Badea CT. Dual-energy micro-CT functional imaging of primary lung cancer in mice using gold and iodine nanoparticle contrast agents: a validation study. Plos One. 9: e88129. PMID 24520351 DOI: 10.1371/Journal.Pone.0088129  0.835
2014 Befera NT, Badea CT, Johnson GA. Comparison of 4D-microSPECT and microCT for murine cardiac function. Molecular Imaging and Biology : Mib : the Official Publication of the Academy of Molecular Imaging. 16: 235-45. PMID 24037175 DOI: 10.1007/S11307-013-0686-Z  0.662
2014 Badea CT, Befera N, Clark D, Qi Y, Johnson GA. Dual-energy micro-CT imaging of pulmonary airway obstruction: Correlation with micro-SPECT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9038. DOI: 10.1117/12.2043094  0.765
2014 Clark DP, Johnson GA, Badea CT. A multi-resolution approach to retrospectively-gated cardiac micro-CT reconstruction Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9033. DOI: 10.1117/12.2043044  0.745
2014 Clark DP, Johnson GA, Badea CT. Robust material decomposition for spectral CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9038. DOI: 10.1117/12.2042546  0.814
2014 Johnston SM, Johnson GA, Badea CT. Helical dual source cone-beam micro-CT 2014 Ieee 11th International Symposium On Biomedical Imaging, Isbi 2014. 177-180.  0.591
2013 Badea CT, Hedlund LW, Johnson GA. A LabVIEW Platform for Preclinical Imaging Using Digital Subtraction Angiography and Micro-CT. Journal of Medical Engineering. 2013: 581617. PMID 27006920 DOI: 10.1155/2013/581617  0.707
2013 Perez BA, Ghafoori AP, Lee CL, Johnston SM, Li Y, Moroshek JG, Ma Y, Mukherjee S, Kim Y, Badea CT, Kirsch DG. Assessing the radiation response of lung cancer with different gene mutations using genetically engineered mice. Frontiers in Oncology. 3: 72. PMID 23565506 DOI: 10.3389/Fonc.2013.00072  0.593
2013 Clark DP, Ghaghada K, Moding EJ, Kirsch DG, Badea CT. In vivo characterization of tumor vasculature using iodine and gold nanoparticles and dual energy micro-CT. Physics in Medicine and Biology. 58: 1683-704. PMID 23422321 DOI: 10.1088/0031-9155/58/6/1683  0.804
2013 Bhavane R, Badea C, Ghaghada KB, Clark D, Vela D, Moturu A, Annapragada A, Johnson GA, Willerson JT, Annapragada A. Dual-energy computed tomography imaging of atherosclerotic plaques in a mouse model using a liposomal-iodine nanoparticle contrast agent. Circulation. Cardiovascular Imaging. 6: 285-94. PMID 23349231 DOI: 10.1161/Circimaging.112.000119  0.801
2013 Moding EJ, Clark DP, Qi Y, Li Y, Ma Y, Ghaghada K, Johnson GA, Kirsch DG, Badea CT. Dual-energy micro-computed tomography imaging of radiation-induced vascular changes in primary mouse sarcomas. International Journal of Radiation Oncology, Biology, Physics. 85: 1353-9. PMID 23122984 DOI: 10.1016/J.Ijrobp.2012.09.027  0.783
2013 Mistry N, Badea C, Gullapalli R, Vujaskovic Z, D' Souza W. WE-G-134-08: Extracting Fractional Regional Ventilation in Mice Medical Physics. 40: 513-513. DOI: 10.1118/1.4815677  0.653
2013 Clark D, Badea A, Johnson GA, Badea CT. Constructing a 4D murine cardiac micro-CT atlas for automated segmentation and phenotyping applications Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8669. DOI: 10.1117/12.2007043  0.789
2013 Clark D, Johnston SM, Johnson GA, Badea CT. The effect of scatter correction on dual energy micro-CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8668. DOI: 10.1117/12.2006904  0.81
2012 Clark D, Johnson GA, Badea CT. Denoising of 4D Cardiac Micro-CT Data Using Median-Centric Bilateral Filtration. Proceedings of Spie--the International Society For Optical Engineering. 8314. PMID 24386540 DOI: 10.1117/12.911478  0.767
2012 Badea CT, Guo X, Clark D, Johnston SM, Marshall C, Piantadosi C. Lung imaging in rodents using dual energy micro-CT. Proceedings of Spie--the International Society For Optical Engineering. 8317. PMID 24027623 DOI: 10.1117/12.912155  0.496
2012 Bell RC, Rogith D, Johnson CW, Badea CT, Athreya KK, Espinosa G, Clark D, Ghafoori AP, Li Y, Kirsch DG, Annapragada A, Ghaghada K. Data analysis: evaluation of nanoscale contrast agent enhanced CT scan to differentiate between benign and malignant lung cancer in mouse model. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2012: 27-35. PMID 23304269  0.773
2012 Badea CT, Stanton IN, Johnston SM, Johnson GA, Therien MJ. Investigations on X-ray luminescence CT for small animal imaging. Proceedings of Spie--the International Society For Optical Engineering. 8313: 83130T. PMID 23227300 DOI: 10.1117/12.911465  0.662
2012 Clark D, Badea A, Liu Y, Johnson GA, Badea CT. Registration-based segmentation of murine 4D cardiac micro-CT data using symmetric normalization. Physics in Medicine and Biology. 57: 6125-45. PMID 22971564 DOI: 10.1088/0031-9155/57/19/6125  0.78
2012 Johnston SM, Johnson GA, Badea CT. Temporal and spectral imaging with micro-CT. Medical Physics. 39: 4943-58. PMID 22894420 DOI: 10.1118/1.4736809  0.729
2012 Badea CT, Athreya KK, Espinosa G, Clark D, Ghafoori AP, Li Y, Kirsch DG, Johnson GA, Annapragada A, Ghaghada KB. Computed tomography imaging of primary lung cancer in mice using a liposomal-iodinated contrast agent. Plos One. 7: e34496. PMID 22485175 DOI: 10.1371/Journal.Pone.0034496  0.805
2012 Badea CT, Guo X, Clark D, Johnston SM, Marshall CD, Piantadosi CA. Dual-energy micro-CT of the rodent lung. American Journal of Physiology. Lung Cellular and Molecular Physiology. 302: L1088-97. PMID 22427526 DOI: 10.1152/Ajplung.00359.2011  0.443
2012 Guo X, Johnston SM, Qi Y, Johnson GA, Badea CT. 4D micro-CT using fast prospective gating. Physics in Medicine and Biology. 57: 257-71. PMID 22156062 DOI: 10.1088/0031-9155/57/1/257  0.735
2012 Guo X, Johnston SM, Johnson GA, Badea CT. A comparison of sampling strategies for dual energy micro-CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8313. DOI: 10.1117/12.911548  0.701
2012 Johnston SM, Badea CT. A spectral calibration technique for x-ray CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8313. DOI: 10.1117/12.911532  0.642
2011 Zhang X, Badea C, Hood G, Wetzel A, Qi Y, Stiles J, Johnson GA. High-resolution reconstruction of fluorescent inclusions in mouse thorax using anatomically guided sampling and parallel Monte Carlo computing. Biomedical Optics Express. 2: 2449-60. PMID 21991539 DOI: 10.1364/Boe.2.002449  0.68
2011 Lin M, Qi Y, Chen AF, Badea CT, Johnson GA. Phenylephrine-modulated cardiopulmonary blood flow measured with use of X-ray digital subtraction angiography. Journal of Pharmacological and Toxicological Methods. 64: 180-6. PMID 21846505 DOI: 10.1016/J.Vascn.2011.08.001  0.593
2011 Badea CT, Hedlund LW, Qi Y, Berridge B, Johnson GA. In vivo imaging of rat coronary arteries using bi-plane digital subtraction angiography. Journal of Pharmacological and Toxicological Methods. 64: 151-7. PMID 21683146 DOI: 10.1016/J.Vascn.2011.05.008  0.647
2011 Badea CT, Johnston SM, Qi Y, Johnson GA. 4D micro-CT for cardiac and perfusion applications with view under sampling. Physics in Medicine and Biology. 56: 3351-69. PMID 21558587 DOI: 10.1088/0031-9155/56/11/011  0.748
2011 Zhang X, Badea CT. Highly efficient detection in fluorescence tomography of quantum dots using time-gated acquisition and ultrafast pulsed laser. Proceedings of Spie--the International Society For Optical Engineering. 7896. PMID 21373380 DOI: 10.1117/12.875502  0.602
2011 Ghaghada KB, Badea CT, Karumbaiah L, Fettig N, Bellamkonda RV, Johnson GA, Annapragada A. Evaluation of tumor microenvironment in an animal model using a nanoparticle contrast agent in computed tomography imaging. Academic Radiology. 18: 20-30. PMID 21145026 DOI: 10.1016/J.Acra.2010.09.003  0.678
2011 Badea CT, Hedlund LW, Cook J, Berridge BR, Johnson GA. Micro-CT imaging assessment of dobutamine-induced cardiac stress in rats. Journal of Pharmacological and Toxicological Methods. 63: 24-9. PMID 20399875 DOI: 10.1016/J.Vascn.2010.04.002  0.702
2011 Johnston SM, Badea CT. Temporal and spectral reconstruction algorithms for x-ray CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7961. DOI: 10.1117/12.878107  0.668
2011 Badea CT, Johnston SM, Qi Y, Ghaghada K, Johnson GA. Dual-energy micro-CT imaging for differentiation of iodine- and gold-based nanoparticles Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7961. DOI: 10.1117/12.878043  0.721
2011 Badea CT, Ghaghada K, Espinosa G, Strong L, Annapragada A. Multi-modality PET-CT imaging of breast cancer in an animal model using nanoparticle x-ray contrast agent and 18F-FDG Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7965. DOI: 10.1117/12.878024  0.719
2011 Rajagopal S, Kovacs J, Badea C, Johnson GA, Rockman HA, Piantadosi CA, Lefkowitz RJ. BETA-ARRESTINS REGULATE SIGNALING BY BONE MORPHOGENETIC PROTEIN TYPE II RECEPTOR IN PULMONARY ARTERIAL HYPERTENSION Journal of the American College of Cardiology. 57: E2046. DOI: 10.1016/S0735-1097(11)62046-9  0.528
2010 Zhang X, Badea CT, Hood G, Wetzel AW, Stiles JR, Johnson GA. Free-space fluorescence tomography with adaptive sampling based on anatomical information from microCT. Proceedings of Spie--the International Society For Optical Engineering. 7757. PMID 21743784 DOI: 10.1117/12.841891  0.652
2010 Johnston SM, Perez BA, Kirsch DG, Badea CT. Phase-selective image reconstruction of the lungs in small animals using Micro-CT. Proceedings of Spie--the International Society For Optical Engineering. 7622: 76223G.1-76223G.9. PMID 21243034 DOI: 10.1117/12.844359  0.493
2010 Badea CT, Johnston SM, Subashi E, Qi Y, Hedlund LW, Johnson GA. Lung perfusion imaging in small animals using 4D micro-CT at heartbeat temporal resolution. Medical Physics. 37: 54-62. PMID 20175466 DOI: 10.1118/1.3264619  0.737
2010 Johnston SM, Johnson GA, Badea CT. GPU-based iterative reconstruction with total variation minimization for micro-CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7622. DOI: 10.1117/12.844368  0.656
2010 Mos R, Gabor M, Nasui M, Petrisor T, Badea C, Rufoloni A, Ciontea L, Petrisor T. Synthesis of epitaxial BaZrO3 thin films by chemical solution deposition Thin Solid Films. 518: 4714-4717. DOI: 10.1016/J.Tsf.2009.12.066  0.537
2009 Zhang X, Badea CT, Johnson GA. Three-dimensional reconstruction in free-space whole-body fluorescence tomography of mice using optically reconstructed surface and atlas anatomy. Journal of Biomedical Optics. 14: 064010. PMID 20059248 DOI: 10.1117/1.3258836  0.663
2009 Samei E, Saunders RS, Badea CT, Ghaghada KB, Hedlund LW, Qi Y, Yuan H, Bentley RC, Mukundan S. Micro-CT imaging of breast tumors in rodents using a liposomal, nanoparticle contrast agent. International Journal of Nanomedicine. 4: 277-282. PMID 20011244 DOI: 10.2147/Ijn.S7881  0.718
2009 Lin M, Marshall CT, Qi Y, Johnston SM, Badea CT, Piantadosi CA, Johnson GA. Quantitative blood flow measurements in the small animal cardiopulmonary system using digital subtraction angiography. Medical Physics. 36: 5347-58. PMID 19994543 DOI: 10.1118/1.3231823  0.586
2009 Zhang X, Badea C, Jacob M, Johnson GA. Development of a noncontact 3-D fluorescence tomography system for small animal in vivo imaging. Proceedings of Spie--the International Society For Optical Engineering. 7191: nihpa106691. PMID 19587837 DOI: 10.1117/12.808199  0.662
2009 Zhang X, Badea C. Effects of sampling strategy on image quality in noncontact panoramic fluorescence diffuse optical tomography for small animal imaging. Optics Express. 17: 5125-38. PMID 19333276 DOI: 10.1364/Oe.17.005125  0.659
2009 Johnston SM, Johnson GA, Badea CT. A material decomposition method for dual energy micro-CT Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7258. DOI: 10.1117/12.811673  0.648
2009 Badea CT, Johnston SM, Lin M, Hedlund LW, Johnson GA. 4D micro-CT-based perfusion imaging in small animals Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7258. DOI: 10.1117/12.811213  0.738
2009 Ghafoori A, Lee C, Perez B, Johnston S, Rodrigues R, Badea C, Kim Y, Lowe S, Kirsch D. In Vivo shRNA to Study the Molecular Mechanisms of Radiation Response of Primary Cancers in Mice International Journal of Radiation Oncology*Biology*Physics. 75: S171-S172. DOI: 10.1016/J.Ijrobp.2009.07.401  0.562
2009 Perez B, Ghafoori A, Johnston S, Jeffords L, Kim Y, Badea C, Johnson G, Kirsch D. Dissecting the Mechanism of Tumor Response to Radiation Therapy with Primary Lung Cancers in Mice International Journal of Radiation Oncology*Biology*Physics. 75: S537. DOI: 10.1016/J.Ijrobp.2009.07.1227  0.58
2008 Badea CT, Drangova M, Holdsworth DW, Johnson GA. In vivo small-animal imaging using micro-CT and digital subtraction angiography Physics in Medicine and Biology. 53. PMID 18758005 DOI: 10.1088/0031-9155/53/19/R01  0.714
2008 Shofer S, Badea C, Qi Y, Potts E, Foster WM, Johnson GA. A micro-CT analysis of murine lung recruitment in bleomycin-induced lung injury. Journal of Applied Physiology (Bethesda, Md. : 1985). 105: 669-77. PMID 18566189 DOI: 10.1152/Japplphysiol.00980.2007  0.656
2008 Johnston SM, Johnson GA, Badea CT. Geometric calibration for a dual tube/detector micro-CT system. Medical Physics. 35: 1820-9. PMID 18561657 DOI: 10.1118/1.2900000  0.722
2008 Badea CT, Schreibmann E, Fox T. A registration based approach for 4D cardiac micro-CT using combined prospective and retrospective gating. Medical Physics. 35: 1170-9. PMID 18491508 DOI: 10.1118/1.2868778  0.705
2008 de Lin M, Ning L, Badea CT, Mistry NN, Qi Y, Johnson GA. A high-precision contrast injector for small animal x-ray digital subtraction angiography. Ieee Transactions On Bio-Medical Engineering. 55: 1082-91. PMID 18334400 DOI: 10.1109/Tbme.2007.909541  0.636
2008 Badea CT, Wetzel AW, Mistry N, Pomerantz S, Nave D, Johnson GA. Left ventricle volume measurements in cardiac micro-CT: the impact of radiation dose and contrast agent. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 32: 239-50. PMID 18243656 DOI: 10.1016/J.Compmedimag.2007.12.004  0.705
2008 Schreibmann E, Badea C, Fox T. TH-C-351-02: Registration Based Automatic Segmentation and Wall Motion Analysis for 4D Cardiac Micro-CT in Mice Medical Physics. 35: 2974-2974. DOI: 10.1118/1.2962858  0.652
2008 Badea CT, Samei E, Ghaghada K, Saunders R, Yuan H, Qi Y, Hedlund LW, Mukundan S. Utility of a prototype liposomal contrast agent for x-ray imaging of breast cancer: A proof of concept using micro-CT in small animals Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6913. DOI: 10.1117/12.772307  0.694
2008 Badea CT, Johnston S, Johnson B, Lin M, Hedlund LW, Johnson GA. A dual micro-CT system for small animal imaging Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6913. DOI: 10.1117/12.772303  0.702
2008 Bogdan M, Parnau A, Badea C, Ardelean I. Time-Dependent Diffusion Studies on Miglyol Molecules Confined in Permeable Polymeric Capsules Applied Magnetic Resonance. 34: 63-69. DOI: 10.1007/S00723-008-0089-5  0.552
2007 Song J, Liu QH, Johnson GA, Badea CT. Sparseness prior based iterative image reconstruction for retrospectively gated cardiac micro-CT. Medical Physics. 34: 4476-83. PMID 18072512 DOI: 10.1118/1.2795830  0.711
2007 Badea CT, Hedlund LW, Mackel JF, Mao L, Rockman HA, Johnson GA. Cardiac micro-computed tomography for morphological and functional phenotyping of muscle LIM protein null mice. Molecular Imaging. 6: 261-8. PMID 17711781 DOI: 10.2310/7290.2007.00022  0.7
2007 Shofer S, Badea C, Auerbach S, Schwartz DA, Johnson GA. A micro-computed tomography-based method for the measurement of pulmonary compliance in healthy and bleomycin-exposed mice. Experimental Lung Research. 33: 169-183. PMID 17558678 DOI: 10.1080/01902140701364458  0.618
2007 Badea CT, Hedlund LW, De Lin M, Mackel JS, Samei E, Johnson GA. Tomographic digital subtraction angiography for lung perfusion estimation in rodents. Medical Physics. 34: 1546-55. PMID 17555236 DOI: 10.1118/1.2717384  0.697
2007 Nahrendorf M, Badea C, Hedlund LW, Figueiredo JL, Sosnovik DE, Johnson GA, Weissleder R. High-resolution imaging of murine myocardial infarction with delayed-enhancement cine micro-CT. American Journal of Physiology. Heart and Circulatory Physiology. 292: H3172-8. PMID 17322414 DOI: 10.1152/Ajpheart.01307.2006  0.688
2007 Wetzel AW, Badea CT, Pomerantz SM, Mistry N, Nave D, Johnson GA. Measurement and modeling of 4D live mouse heart volumes from CT time series Proceedings of Spie - the International Society For Optical Engineering. 6491. DOI: 10.1117/12.704792  0.671
2006 Badea CT, Hedlund LW, De Lin M, Boslego Mackel JF, Johnson GA. Tumor imaging in small animals with a combined micro-CT/micro-DSA system using iodinated conventional and blood pool contrast agents. Contrast Media & Molecular Imaging. 1: 153-64. PMID 17193692 DOI: 10.1002/Cmmi.103  0.73
2006 Lin MD, Samei E, Badea CT, Yoshizumi TT, Johnson GA. Optimized radiographic spectra for small animal digital subtraction angiography. Medical Physics. 33: 4249-57. PMID 17153403 DOI: 10.1118/1.2356646  0.661
2006 Oldham M, Sakhalkar H, Oliver T, Wang YM, Kirpatrick J, Cao Y, Badea C, Johnson GA, Dewhirst M. Three-dimensional imaging of xenograft tumors using optical computed and emission tomography Medical Physics. 33: 3193-3202. PMID 17022212 DOI: 10.1118/1.2217109  0.679
2006 Badea CT, Bucholz E, Hedlund LW, Rockman HA, Johnson GA. Imaging methods for morphological and functional phenotyping of the rodent heart. Toxicologic Pathology. 34: 111-7. PMID 16507552 DOI: 10.1080/01926230500404126  0.696
2006 Mukundan S, Ghaghada KB, Badea CT, Kao CY, Hedlund LW, Provenzale JM, Johnson GA, Chen E, Bellamkonda RV, Annapragada A. A liposomal nanoscale contrast agent for preclinical CT in mice. Ajr. American Journal of Roentgenology. 186: 300-7. PMID 16423931 DOI: 10.2214/Ajr.05.0523  0.7
2006 Badea C, Hedlund L, Lin M, Boslego J, Johnson G. CMR 2005: 12.02: Micro-CT and micro-DSA of small animal models of disease using iodinated conventional and blood pool contrast agents Contrast Media & Molecular Imaging. 1: 83-83. DOI: 10.1002/Cmmi.67  0.656
2006 Badea CT, Hedlund LW, Lin MD, Boslego JF, Johnson GA. Functional imaging in small animals using tomographic digital subtraction angiography 2006 3rd Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 2006: 1208-1211.  0.688
2005 Badea CT, Fubara B, Hedlund LW, Johnson GA. 4-D micro-CT of the mouse heart. Molecular Imaging. 4: 110-6. PMID 16105509 DOI: 10.1162/15353500200504187  0.688
2005 Maï W, Badea CT, Wheeler CT, Hedlund LW, Johnson GA. Effects of breathing and cardiac motion on spatial resolution in the microscopic imaging of rodents. Magnetic Resonance in Medicine. 53: 858-65. PMID 15799053 DOI: 10.1002/Mrm.20400  0.649
2005 Badea C, Hedlund LW, Johnson GA. Micro-CT with respiratory and cardiac gating. Medical Physics. 31: 3324-9. PMID 15651615 DOI: 10.1118/1.1812604  0.679
2004 Badea C, Gordon R. Experiments with the nonlinear and chaotic behaviour of the multiplicative algebraic reconstruction technique (MART) algorithm for computed tomography. Physics in Medicine and Biology. 49: 1455-74. PMID 15152685 DOI: 10.1088/0031-9155/49/8/006  0.656
2004 Badea CT, Hedlund LW, Wheeler CT, Mai W, Johnson GA. Volumetric micro-CT system for in vivo microscopy 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 2: 1377-1380.  0.665
2004 De Lin M, Badea CT, Johnson GA. Optimized radiographic spectra for digital subtraction angiography in the mouse 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 2: 1412-1415.  0.603
2004 Mai W, Badea CT, Wheeler CT, Hedlund LW, Johnson GA. Effects of breathing motion on the spatial resolution in microscopic imaging techniques of rodents 2004 2nd Ieee International Symposium On Biomedical Imaging: Macro to Nano. 1: 472-475.  0.605
2003 Buliev IG, Badea CT, Kolitsi Z, Pallikarakis N. Estimation of the heart respiratory motion with applications for cone beam computed tomography imaging: a simulation study. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 7: 404-11. PMID 15000366 DOI: 10.1109/TITB.2003.821336  0.631
2003 Soimu D, Badea C, Pallikarakis N. A novel approach for distortion correction for X-ray image intensifiers. Computerized Medical Imaging and Graphics. 27: 79-85. PMID 12573892 DOI: 10.1016/S0895-6111(02)00055-1  0.672
2003 Buliev IG, Badea CT, Pallikarakis N. Respiratory displacement modelling in cone beam computed tomography Computers in Cardiology. 30: 617-620.  0.646
2002 Buliev I, Badea C, Pallikarakis N. Logarithmic amplifier for computed tomography tasks using fluoroscopic projections. Journal of Medical Engineering & Technology. 26: 247-252. PMID 12490030 DOI: 10.1080/03091900210156832  0.667
2001 Badea C, Kolitsi Z, Pallikarakis N. Image quality in extended ARC filtered digital tomosynthesis Acta Radiologica. 42: 244-248. DOI: 10.1080/028418501127346585  0.676
2001 Badea C, Kolitsi Z, Pallikarakis N. A 3D imaging system for in-theatre orthopedic applications based on Digital Tomosynthesis International Congress Series. 1230: 1209-1210. DOI: 10.1016/S0531-5131(01)00229-1  0.593
1999 Messaris G, Kolitsi Z, Badea C, Pallikarakis N. Three-dimensional localisation based on projectional and tomographic image correlation: an application for digital tomosynthesis Medical Engineering & Physics. 21: 101-109. PMID 10426510 DOI: 10.1016/S1350-4533(99)00015-6  0.446
1999 Bocioaca A, Badea C, Papatheodoropoulos C, Kostopoulos G. A software tool to assist the planning of electrophysiological experiments on rat brain slices Studies in Health Technology and Informatics. 68: 976-979. DOI: 10.3233/978-1-60750-912-7-976  0.484
1998 Badea C, Kolitsi Z, Pallikarakis N. A wavelet-based method for removal of out-of-plane structures in digital tomosynthesis Computerized Medical Imaging and Graphics. 22: 309-315. PMID 9840661 DOI: 10.1016/S0895-6111(98)00037-8  0.409
1996 Kosta M, Messaris G, Badea C, Kolitsi Z. 427A localization tool on the basis of digital tomosynthesis Radiotherapy and Oncology. 40: S110. DOI: 10.1016/S0167-8140(96)80436-1  0.484
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