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Perry G. Ridge, Ph.D. - Publications

Affiliations: 
2013 Biology Brigham Young University, Provo, UT, United States 
Area:
Alzheimer's disease genetics
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50 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Bellenguez C, Küçükali F, Jansen IE, Kleineidam L, Moreno-Grau S, Amin N, Naj AC, Campos-Martin R, Grenier-Boley B, Andrade V, Holmans PA, Boland A, Damotte V, van der Lee SJ, Costa MR, ... ... Ridge P, et al. New insights into the genetic etiology of Alzheimer's disease and related dementias. Nature Genetics. PMID 35379992 DOI: 10.1038/s41588-022-01024-z  0.695
2020 Murcia JDG, Weinert A, Freitas CMT, Arens DK, Ferrel MN, Grose JH, Ridge PG, Wilson E, Kauwe JSK, Weber KS. Atypical chemokine receptor ACKR2-V41A has decreased CCL2 binding, scavenging, and activation, supporting sustained inflammation and increased Alzheimer's disease risk. Scientific Reports. 10: 8019. PMID 32415244 DOI: 10.1038/S41598-020-64755-1  0.377
2019 Ebbert MTW, Jensen TD, Jansen-West K, Sens JP, Reddy JS, Ridge PG, Kauwe JSK, Belzil V, Pregent L, Carrasquillo MM, Keene D, Larson E, Crane P, Asmann YW, Ertekin-Taner N, et al. Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight. Genome Biology. 20: 97. PMID 31104630 DOI: 10.1186/S13059-019-1707-2  0.368
2019 Tavana JP, Rosene M, Jensen NO, Ridge PG, Kauwe JS, Karch CM. RAB10: an Alzheimer's disease resilience locus and potential drug target. Clinical Interventions in Aging. 14: 73-79. PMID 30643396 DOI: 10.2147/Cia.S159148  0.657
2019 Black GS, Boehme KL, Mukherjee S, Crane PK, Ridge PG, Kauwe J. P2-136: Analyzing The Snp-Based Heritability In Alzheimer'S Disease Alzheimers & Dementia. 15. DOI: 10.1016/J.Jalz.2019.06.2543  0.651
2018 Sexton CE, Ebbert MTW, Miller RH, Ferrel M, Tschanz JAT, Corcoran CD, Ridge PG, Kauwe JSK. Common DNA Variants Accurately Rank an Individual of Extreme Height. International Journal of Genomics. 2018: 5121540. PMID 30255029 DOI: 10.1155/2018/5121540  0.349
2018 Ridge PG, Kauwe JSK. Mitochondria and Alzheimer's Disease: the Role of Mitochondrial Genetic Variation. Current Genetic Medicine Reports. 6: 1-10. PMID 29564191 DOI: 10.1007/S40142-018-0132-2  0.389
2018 Sassi C, Nalls MA, Ridge PG, Gibbs JR, Lupton MK, Troakes C, Lunnon K, Al-Sarraj S, Brown KS, Medway C, Lord J, Turton J, Bras J, Blumenau S, et al. Mendelian adult-onset leukodystrophy genes in Alzheimer's disease: critical influence of CSF1R and NOTCH3. Neurobiology of Aging. PMID 29544907 DOI: 10.1016/j.neurobiolaging.2018.01.015  0.675
2018 Ridge PG, Karch CM, Hsu S, Arano I, Teerlink CC, Ebbert MTW, Murcia JDG, Farnham JM, Damato AR, Allen M, Wang X, Harari O, Fernandez VM, Guerreiro R, Bras J, et al. Correction to: Linkage, whole genome sequence, and biological data implicate variants in RAB10 in Alzheimer's disease resilience. Genome Medicine. 10: 4. PMID 29329552 DOI: 10.1186/S13073-018-0516-7  0.582
2018 Ridge PG, Wadsworth ME, Miller JB, Saykin AJ, Green RC, Kauwe JSK. Assembly of 809 whole mitochondrial genomes with clinical, imaging, and fluid biomarker phenotyping. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 29306584 DOI: 10.1016/J.Jalz.2017.11.013  0.392
2018 Black G, Staley L, Ridge PG, Crane PK, Mukherjee S, Kauwe J, Adgc. P1-493: Clinical Versus Neuropathological Diagnosis In Alzheimer'S Disease Research Alzheimers & Dementia. 14. DOI: 10.1016/J.Jalz.2018.06.503  0.616
2017 Ridge PG, Karch CM, Hsu S, Arano I, Teerlink CC, Ebbert MTW, Gonzalez Murcia JD, Farnham JM, Damato AR, Allen M, Wang X, Harari O, Fernandez VM, Guerreiro R, Bras J, et al. Linkage, whole genome sequence, and biological data implicate variants in RAB10 in Alzheimer's disease resilience. Genome Medicine. 9: 100. PMID 29183403 DOI: 10.1186/S13073-017-0486-1  0.58
2016 Deming Y, Xia J, Cai Y, Lord J, Del-Aguila JL, Fernandez MV, Carrell D, Black K, Budde J, Ma S, Saef B, Howells B, Bertelsen S, Bailey M, Ridge PG, et al. Genetic studies of plasma analytes identify novel potential biomarkers for several complex traits. Scientific Reports. 6: 18092. PMID 36647296 DOI: 10.1038/srep18092  0.642
2016 Ebbert MT, Wadsworth ME, Staley LA, Hoyt KL, Pickett B, Miller J, Duce J, Kauwe JS, Ridge PG. Evaluating the necessity of PCR duplicate removal from next-generation sequencing data and a comparison of approaches. Bmc Bioinformatics. 17: 239. PMID 27454357 DOI: 10.1186/S12859-016-1097-3  0.727
2016 Bodily PM, Fujimoto MS, Page JT, Clement MJ, Ebbert MT, Ridge PG. A novel approach for multi-SNP GWAS and its application in Alzheimer's disease. Bmc Bioinformatics. 17: 268. PMID 27453991 DOI: 10.1186/S12859-016-1093-7  0.768
2016 Ebbert MT, Staley LA, Parker J, Parker S, Bailey M, Ridge PG, Goate AM, Kauwe JS. Variants in CCL16 are associated with blood plasma and cerebrospinal fluid CCL16 protein levels. Bmc Genomics. 17: 437. PMID 27357396 DOI: 10.1186/S12864-016-2788-X  0.751
2016 Staley LA, Ebbert MT, Bunker D, Bailey M, Ridge PG, Goate AM, Kauwe JS. Variants in ACPP are associated with cerebrospinal fluid Prostatic Acid Phosphatase levels. Bmc Genomics. 17: 439. PMID 27357282 DOI: 10.1186/S12864-016-2787-Y  0.733
2016 Staley LA, Ebbert MT, Parker S, Bailey M, Ridge PG, Goate AM, Kauwe JS. Genome-wide association study of prolactin levels in blood plasma and cerebrospinal fluid. Bmc Genomics. 17: 436. PMID 27357110 DOI: 10.1186/S12864-016-2785-0  0.741
2016 Sassi C, Nalls MA, Ridge PG, Gibbs JR, Ding J, Lupton MK, Troakes C, Lunnon K, Al-Sarraj S, Brown KS, Medway C, Clement N, Lord J, Turton J, Bras J, et al. ABCA7 p.G215S as potential protective factor for Alzheimer's disease. Neurobiology of Aging. PMID 27289440 DOI: 10.1016/J.Neurobiolaging.2016.04.004  0.717
2016 Sassi C, Ridge PG, Nalls MA, Gibbs R, Ding J, Lupton MK, Troakes C, Lunnon K, Al-Sarraj S, Brown KS, Medway C, Lord J, Turton J, Morgan K, et al. Influence of Coding Variability in APP-Aβ Metabolism Genes in Sporadic Alzheimer's Disease. Plos One. 11: e0150079. PMID 27249223 DOI: 10.1371/Journal.Pone.0150079  0.696
2016 Pickett BD, Karlinsey SM, Penrod CE, Cormier MJ, Ebbert MT, Shiozawa DK, Whipple CJ, Ridge PG. SA-SSR: A Suffix Array-Based Algorithm for Exhaustive and Efficient SSR Discovery in Large Genetic Sequences. Bioinformatics (Oxford, England). PMID 27170037 DOI: 10.1093/Bioinformatics/Btw298  0.672
2016 Ridge PG, Hoyt KB, Boehme K, Mukherjee S, Crane PK, Haines JL, Mayeux R, Farrer LA, Pericak-Vance MA, Schellenberg GD, Kauwe JS. Assessment of the genetic variance of late-onset Alzheimer's disease. Neurobiology of Aging. PMID 27036079 DOI: 10.1016/J.Neurobiolaging.2016.02.024  0.661
2016 Deming Y, Xia J, Cai Y, Lord J, Del-Aguila JL, Fernandez MV, Carrell D, Black K, Budde J, Ma S, Saef B, Howells B, Bertelsen S, Bailey M, Ridge PG, et al. Genetic studies of plasma analytes identify novel potential biomarkers for several complex traits Scientific Reports. 6. DOI: 10.1038/Srep18092  0.668
2016 Kauwe K, Arano I, Bras JT, Cannon-Albright L, Cruchaga C, Goate AM, Murcia JDG, Guerreiro R, Hardy J, Hsu S, Karch C, Munger RG, Norton MC, Ridge PG, Sassi C, et al. Linkage And Whole Genome Sequence Analysis Of Alzheimer'S Disease Resilience And Risk Alzheimers & Dementia. 12: 675. DOI: 10.1016/J.Jalz.2016.06.1325  0.565
2015 Ebbert MT, Boehme KL, Wadsworth ME, Staley LA, Mukherjee S, Crane PK, Ridge PG, Kauwe JS. Interaction between variants in CLU and MS4A4E modulates Alzheimer's disease risk. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 26449541 DOI: 10.1016/J.Jalz.2015.08.163  0.75
2015 Ebbert MT, Ridge PG, Kauwe JS. Bridging the Gap between Statistical and Biological Epistasis in Alzheimer's Disease. Biomed Research International. 2015: 870123. PMID 26075270 DOI: 10.1155/2015/870123  0.784
2015 Lythgoe C, Perkes A, Peterson M, Schmutz C, Leary M, Ebbert MT, Ridge PG, Norton MC, Tschanz JT, Munger RG, Corcoran CD, Kauwe JS. Population-based analysis of cholesteryl ester transfer protein identifies association between I405V and cognitive decline: the Cache County Study. Neurobiology of Aging. 36: 547.e1-3. PMID 25260850 DOI: 10.1016/J.Neurobiolaging.2014.08.022  0.752
2014 Kauwe JS, Bailey MH, Ridge PG, Perry R, Wadsworth ME, Hoyt KL, Staley LA, Karch CM, Harari O, Cruchaga C, Ainscough BJ, Bales K, Pickering EH, Bertelsen S, et al. Genome-wide association study of CSF levels of 59 alzheimer's disease candidate proteins: significant associations with proteins involved in amyloid processing and inflammation. Plos Genetics. 10: e1004758. PMID 25340798 DOI: 10.1371/Journal.Pgen.1004758  0.723
2014 Ebbert MT, Wadsworth ME, Boehme KL, Hoyt KL, Sharp AR, O'Fallon BD, Kauwe JS, Ridge PG. Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files. Bmc Bioinformatics. 15: S12. PMID 25080132 DOI: 10.1186/1471-2105-15-S7-S12  0.757
2014 Sharp AR, Ridge PG, Bailey MH, Boehme KL, Norton MC, Tschanz JT, Munger RG, Corcoran CD, Kauwe JS. Population substructure in Cache County, Utah: the Cache County study. Bmc Bioinformatics. 15: S8. PMID 25078123 DOI: 10.1186/1471-2105-15-S7-S8  0.585
2014 Ridge PG, Maxwell TJ, Foutz SJ, Bailey MH, Corcoran CD, Tschanz JT, Norton MC, Munger RG, O'Brien E, Kerber RA, Cawthon RM, Kauwe JS. Mitochondrial genomic variation associated with higher mitochondrial copy number: the Cache County Study on Memory Health and Aging. Bmc Bioinformatics. 15: S6. PMID 25077862 DOI: 10.1186/1471-2105-15-S7-S6  0.562
2014 Cruchaga C, Karch CM, Jin SC, Benitez BA, Cai Y, Guerreiro R, Harari O, Norton J, Budde J, Bertelsen S, Jeng AT, Cooper B, Skorupa T, Carrell D, Levitch D, ... ... Ridge PG, et al. Rare coding variants in the phospholipase D3 gene confer risk for Alzheimer's disease. Nature. 505: 550-4. PMID 24336208 DOI: 10.1038/Nature12825  0.718
2014 Ebbert MT, Ridge PG, Wilson AR, Sharp AR, Bailey M, Norton MC, Tschanz JT, Munger RG, Corcoran CD, Kauwe JS. Population-based analysis of Alzheimer's disease risk alleles implicates genetic interactions. Biological Psychiatry. 75: 732-7. PMID 23954108 DOI: 10.1016/J.Biopsych.2013.07.008  0.77
2014 Cruchaga C, Brkanac Z, Jin SC, Benitez BA, Rehker J, Ridge P, Kauwe J, Hardy J, Bras J, Guerreiro R, Singleton A, Goate A. O1-04-02: EXOME-SEQUENCING IN LATE-ONSET FAMILIES IDENTIFIED ADDITIONAL CANDIDATES GENES FOR ALZHEIMER'S DISEASE Alzheimer's & Dementia. 10: P135-P135. DOI: 10.1016/J.Jalz.2014.04.075  0.682
2013 Ridge PG, Mukherjee S, Crane PK, Kauwe JS. Alzheimer's disease: analyzing the missing heritability. Plos One. 8: e79771. PMID 24244562 DOI: 10.1371/Journal.Pone.0079771  0.693
2013 Kauwe JS, Ridge PG, Foster NL, Cannon-Albright LA. Strong evidence for a genetic contribution to late-onset Alzheimer's disease mortality: a population-based study. Plos One. 8: e77087. PMID 24116205 DOI: 10.1371/Journal.Pone.0077087  0.638
2013 Ridge PG, Koop A, Maxwell TJ, Bailey MH, Swerdlow RH, Kauwe JS, Honea RA. Mitochondrial haplotypes associated with biomarkers for Alzheimer's disease. Plos One. 8: e74158. PMID 24040196 DOI: 10.1371/Journal.Pone.0074158  0.671
2013 Ridge PG, Ebbert MT, Kauwe JS. Genetics of Alzheimer's disease. Biomed Research International. 2013: 254954. PMID 23984328 DOI: 10.1155/2013/254954  0.795
2013 Ridge PG, Miller C, Bayrak-Toydemir P, Best DH, Mao R, Swensen JJ, Lyon E, Voelkerding KV. Cystic fibrosis testing in a referral laboratory: results and lessons from a six-year period. Journal of Clinical Bioinformatics. 3: 3. PMID 23343000 DOI: 10.1186/2043-9113-3-3  0.373
2013 Ridge P, Koop A, Maxwell T, Swerdlow R, Kauwe J, Honea R. P1-154: Mitochondrial genetic variation is associated with brain imaging markers of Alzheimer's disease neurodegeneration Alzheimer's & Dementia. 9: P206-P206. DOI: 10.1016/J.Jalz.2013.05.377  0.634
2013 Ridge P, Mukherjee S, Crane P, Kauwe J. Alzheimer's disease: Finding the missing heritability Alzheimers & Dementia. 9. DOI: 10.1016/J.Jalz.2013.05.1079  0.662
2013 Ebbert M, Ridge P, Wilson A, Sharp A, Bailey M, Norton M, Tschanz J, Munger R, Corcoran C, Kauwe J. P3-005: Population-based analysis of late-onset Alzheimer's disease risk alleles identifies candidate gene-gene interactions Alzheimer's & Dementia. 9: P551-P551. DOI: 10.1016/J.Jalz.2013.05.1074  0.776
2013 Kauwe J, Bailey M, Ridge P, Cruchaga C, Foutz S, Perry R, Harari O, Bertelsen S, Ainscough B, Bales K, Pickering EH, Fagan A, Holtzman D, Morris J, Goate A. O4-01-01: Association of genetic variants with cerebrospinal fluid protein levels of ACE, MMP3 and other proteins and risk for Alzheimer's disease Alzheimer's & Dementia. 9: P677-P678. DOI: 10.1016/J.Jalz.2013.04.334  0.683
2012 Wooderchak-Donahue WL, O'Fallon B, Furtado LV, Durtschi JD, Plant P, Ridge PG, Rope AF, Yetman AT, Bayrak-Toydemir P. A direct comparison of next generation sequencing enrichment methods using an aortopathy gene panel- clinical diagnostics perspective. Bmc Medical Genomics. 5: 50. PMID 23148498 DOI: 10.1186/1755-8794-5-50  0.344
2012 Ridge PG, Maxwell TJ, Corcoran CD, Norton MC, Tschanz JT, O'Brien E, Kerber RA, Cawthon RM, Munger RG, Kauwe JS. Mitochondrial genomic analysis of late onset Alzheimer's disease reveals protective haplogroups H6A1A/H6A1B: the Cache County Study on Memory in Aging. Plos One. 7: e45134. PMID 23028804 DOI: 10.1371/Journal.Pone.0045134  0.64
2012 Crockett DK, Ridge PG, Wilson AR, Lyon E, Williams MS, Narus SP, Facelli JC, Mitchell JA. Consensus: a framework for evaluation of uncertain gene variants in laboratory test reporting. Genome Medicine. 4: 48. PMID 22640420 DOI: 10.1186/Gm347  0.362
2012 Mariotti M, Ridge PG, Zhang Y, Lobanov AV, Pringle TH, Guigo R, Hatfield DL, Gladyshev VN. Composition and evolution of the vertebrate and mammalian selenoproteomes. Plos One. 7: e33066. PMID 22479358 DOI: 10.1371/Journal.Pone.0033066  0.307
2012 Ridge P, Maxwell T, Corcoran C, Tschanz J, Cawthon R, Munger R, Kauwe J. O3-11-05: Mitochondrial variation associated with decreased Alzheimer's disease incidence in the Cache County Study on Memory Health and Aging Alzheimer's & Dementia. 8: P452-P452. DOI: 10.1016/J.Jalz.2012.05.1204  0.596
2011 Cruchaga C, Nowotny P, Kauwe JS, Ridge PG, Mayo K, Bertelsen S, Hinrichs A, Fagan AM, Holtzman DM, Morris JC, Goate AM. Association and expression analyses with single-nucleotide polymorphisms in TOMM40 in Alzheimer disease. Archives of Neurology. 68: 1013-9. PMID 21825236 DOI: 10.1001/Archneurol.2011.155  0.71
2011 Crockett DK, Piccolo SR, Ridge PG, Margraf RL, Lyon E, Williams MS, Mitchell JA. Predicting phenotypic severity of uncertain gene variants in the RET proto-oncogene. Plos One. 6: e18380. PMID 21479187 DOI: 10.1371/Journal.Pone.0018380  0.332
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