Takaki Komiyama, Ph.D. - Publications

Affiliations: 
University of California, San Diego, La Jolla, CA 

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Ren C, Komiyama T. Characterizing cortex-wide dynamics with wide-field calcium imaging. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 33893217 DOI: 10.1523/JNEUROSCI.3003-20.2021  0.68
2021 Liu X, Ren C, Lu Y, Liu Y, Kim JH, Leutgeb S, Komiyama T, Kuzum D. Multimodal neural recordings with Neuro-FITM uncover diverse patterns of cortical-hippocampal interactions. Nature Neuroscience. PMID 33875893 DOI: 10.1038/s41593-021-00841-5  0.68
2020 Wu A, Yu B, Chen Q, Matthews GA, Lu C, Campbell E, Tye KM, Komiyama T. Context-dependent plasticity of adult-born neurons regulated by cortical feedback. Science Advances. 6. PMID 33067236 DOI: 10.1126/sciadv.abc8319  1
2020 Ma Z, Liu H, Komiyama T, Wessel R. Stability of motor cortex network states during learning-associated neural reorganizations. Journal of Neurophysiology. PMID 32937084 DOI: 10.1152/Jn.00061.2020  0.6
2020 Ding D, Lu Y, Zhao R, Liu X, De-Eknamkul C, Ren C, Mehrsa A, Komiyama T, Kuzum D. Evaluation of Durability of Transparent Graphene Electrodes Fabricated on Different Flexible Substrates for Chronic in vivo Experiments. Ieee Transactions On Bio-Medical Engineering. PMID 32191878 DOI: 10.1109/Tbme.2020.2979475  0.68
2020 Wu A, Yu B, Komiyama T. Plasticity in olfactory bulb circuits. Current Opinion in Neurobiology. 64: 17-23. PMID 32062045 DOI: 10.1016/J.Conb.2020.01.007  0.56
2019 Hwang EJ, Link TD, Hu YY, Lu S, Wang EH, Lilascharoen V, Aronson S, O'Neil K, Lim BK, Komiyama T. Corticostriatal Flow of Action Selection Bias. Neuron. PMID 31706697 DOI: 10.1016/J.Neuron.2019.09.028  0.6
2019 Hwang EJ, Dahlen JE, Hu YY, Aguilar K, Yu B, Mukundan M, Mitani A, Komiyama T. Disengagement of motor cortex from movement control during long-term learning. Science Advances. 5: eaay0001. PMID 31693007 DOI: 10.1126/Sciadv.Aay0001  1
2019 Hattori R, Danskin B, Babic Z, Mlynaryk N, Komiyama T. Area-Specificity and Plasticity of History-Dependent Value Coding During Learning. Cell. PMID 31080067 DOI: 10.1016/J.Cell.2019.04.027  0.64
2018 Lu Y, Liu X, Hattori R, Ren C, Zhang X, Komiyama T, Kuzum D. Ultra-low Impedance Graphene Microelectrodes with High Optical Transparency for Simultaneous Deep 2-photon Imaging in Transgenic Mice. Advanced Functional Materials. 28. PMID 34084100 DOI: 10.1002/adfm.201800002  0.68
2018 Mitani A, Komiyama T. Real-Time Processing of Two-Photon Calcium Imaging Data Including Lateral Motion Artifact Correction. Frontiers in Neuroinformatics. 12: 98. PMID 30618703 DOI: 10.3389/Fninf.2018.00098  1
2018 Li WL, Chu MW, Wu A, Suzuki Y, Imayoshi I, Komiyama T. Adult-born neurons facilitate olfactory bulb pattern separation during task engagement. Elife. 7. PMID 29533179 DOI: 10.7554/Elife.33006  1
2018 Li WL, Chu MW, Wu A, Suzuki Y, Imayoshi I, Komiyama T. Author response: Adult-born neurons facilitate olfactory bulb pattern separation during task engagement Elife. DOI: 10.7554/Elife.33006.017  1
2017 Mitani A, Dong M, Komiyama T. Brain-Computer Interface with Inhibitory Neurons Reveals Subtype-Specific Strategies. Current Biology : Cb. PMID 29249656 DOI: 10.1016/J.Cub.2017.11.035  1
2017 Hwang EJ, Dahlen JE, Mukundan M, Komiyama T. History-based action selection bias in posterior parietal cortex. Nature Communications. 8: 1242. PMID 29089500 DOI: 10.1038/S41467-017-01356-Z  1
2017 Chu MW, Li WL, Komiyama T. Lack of Pattern Separation in Sensory Inputs to the Olfactory Bulb during Perceptual Learning. Eneuro. 4. PMID 28955724 DOI: 10.1523/ENEURO.0287-17.2017  0.96
2017 Hattori R, Kuchibhotla KV, Froemke RC, Komiyama T. Functions and dysfunctions of neocortical inhibitory neuron subtypes. Nature Neuroscience. 20: 1199-1208. PMID 28849791 DOI: 10.1038/Nn.4619  0.64
2017 Peters AJ, Lee J, Hedrick NG, O'Neil K, Komiyama T. Reorganization of corticospinal output during motor learning. Nature Neuroscience. PMID 28671694 DOI: 10.1038/Nn.4596  1
2017 Makino H, Ren C, Liu H, Kim AN, Kondapaneni N, Liu X, Kuzum D, Komiyama T. Transformation of Cortex-wide Emergent Properties during Motor Learning. Neuron. 94: 880-890.e8. PMID 28521138 DOI: 10.1016/J.Neuron.2017.04.015  0.68
2017 Peters AJ, Liu H, Komiyama T. Learning in the Rodent Motor Cortex. Annual Review of Neuroscience. PMID 28375768 DOI: 10.1146/Annurev-Neuro-072116-031407  0.6
2016 Makino H, Hwang EJ, Hedrick NG, Komiyama T. Circuit Mechanisms of Sensorimotor Learning. Neuron. 92: 705-721. PMID 27883902 DOI: 10.1016/J.Neuron.2016.10.029  1
2016 Chu MW, Li WL, Komiyama T. Balancing the Robustness and Efficiency of Odor Representations during Learning. Neuron. PMID 27667005 DOI: 10.1016/J.Neuron.2016.09.004  0.96
2015 Makino H, Komiyama T. Learning enhances the relative impact of top-down processing in the visual cortex. Nature Neuroscience. 18: 1116-22. PMID 26167904 DOI: 10.1038/Nn.4061  1
2015 Chen SX, Kim AN, Peters AJ, Komiyama T. Subtype-specific plasticity of inhibitory circuits in motor cortex during motor learning. Nature Neuroscience. PMID 26098758 DOI: 10.1038/Nn.4049  0.44
2015 Boyd AM, Kato HK, Komiyama T, Isaacson JS. Broadcasting of cortical activity to the olfactory bulb. Cell Reports. 10: 1032-9. PMID 25704808 DOI: 10.1016/J.Celrep.2015.01.047  0.4
2014 Kabir ME, Krishnaswamy S, Selvakumar D, Miyamoto M, Furuichi Y, Komiyama T. Antigen itself antibody: an alternative one-step immunoassay for measuring the anti-idiotypic antibody titer. Microbiology and Immunology. 58: 523-9. PMID 25040248 DOI: 10.1111/1348-0421.12178  0.44
2014 Peters AJ, Chen SX, Komiyama T. Emergence of reproducible spatiotemporal activity during motor learning. Nature. 510: 263-7. PMID 24805237 DOI: 10.1038/Nature13235  1
2014 Guo ZV, Hires SA, Li N, O'Connor DH, Komiyama T, Ophir E, Huber D, Bonardi C, Morandell K, Gutnisky D, Peron S, Xu NL, Cox J, Svoboda K. Procedures for behavioral experiments in head-fixed mice. Plos One. 9: e88678. PMID 24520413 DOI: 10.1371/Journal.Pone.0088678  1
2014 Guo ZV, Hires SA, Li N, O'Connor DH, Komiyama T. Procedures for Behavioral Experiments in Head-Fixed Mice (PLoS ONE (2014) 9, 2 (e88678) DOI:10.1371/journal.pone.0088678) Plos One. 9. DOI: 10.1371/Journal.Pone.0101397  1
2013 Kato HK, Gillet SN, Peters AJ, Isaacson JS, Komiyama T. Parvalbumin-expressing interneurons linearly control olfactory bulb output. Neuron. 80: 1218-31. PMID 24239124 DOI: 10.1016/J.Neuron.2013.08.036  1
2012 Kato HK, Chu MW, Isaacson JS, Komiyama T. Dynamic sensory representations in the olfactory bulb: modulation by wakefulness and experience. Neuron. 76: 962-75. PMID 23217744 DOI: 10.1016/J.Neuron.2012.09.037  1
2012 Miyamoto M, Furuichi Y, Komiyama T. The high-osmolarity glycerol- and cell wall integrity-MAP kinase pathways of Saccharomyces cerevisiae are involved in adaptation to the action of killer toxin HM-1. Yeast (Chichester, England). 29: 475-85. PMID 23065846 DOI: 10.1002/Yea.2927  0.44
2011 Sweeney LB, Chou YH, Wu Z, Joo W, Komiyama T, Potter CJ, Kolodkin AL, Garcia KC, Luo L. Secreted semaphorins from degenerating larval ORN axons direct adult projection neuron dendrite targeting. Neuron. 72: 734-47. PMID 22153371 DOI: 10.1016/J.Neuron.2011.09.026  1
2011 Kabir ME, Karim N, Krishnaswamy S, Selvakumar D, Miyamoto M, Furuichi Y, Komiyama T. Peptide derived from anti-idiotypic single-chain antibody is a potent antifungal agent compared to its parent fungicide HM-1 killer toxin peptide. Applied Microbiology and Biotechnology. 92: 1151-60. PMID 21691785 DOI: 10.1007/s00253-011-3412-2  0.44
2011 Rahman MM, Kabir ME, Krishnaswamy S, Miyamoto M, Furuichi Y, Komiyama T. New avenues for phage-display library to produce a Cryptococcus-specific anti-idiotypic antibody of HM-1 killer toxin. Journal of Molecular Recognition : Jmr. 24: 631-41. PMID 21584874 DOI: 10.1002/Jmr.1075  0.44
2011 Kabir ME, Krishnaswamy S, Miyamoto M, Furuichi Y, Komiyama T. An altered camelid-like single domain anti-idiotypic antibody fragment of HM-1 killer toxin: acts as an effective antifungal agent. Applied Microbiology and Biotechnology. 90: 553-64. PMID 21305279 DOI: 10.1007/s00253-011-3123-8  0.44
2011 Krishnaswamy S, Kabir ME, Rahman MM, Miyamoto M, Furuichi Y, Komiyama T. Isolation and characterization of recombinant single chain fragment variable anti-idiotypic antibody specific to Aspergillus fumigatus membrane protein. Journal of Immunological Methods. 366: 60-8. PMID 21277307 DOI: 10.1016/J.Jim.2011.01.006  0.44
2011 Miyamoto M, Furuichi Y, Komiyama T. Genome-wide screen of Saccharomyces cerevisiae for killer toxin HM-1 resistance. Yeast (Chichester, England). 28: 27-41. PMID 20803478 DOI: 10.1002/Yea.1818  0.44
2010 Ma CM, Abe T, Komiyama T, Wang W, Hattori M, Daneshtalab M. Synthesis, anti-fungal and 1,3-β-D-glucan synthase inhibitory activities of caffeic and quinic acid derivatives. Bioorganic & Medicinal Chemistry. 18: 7009-14. PMID 20813534 DOI: 10.1016/j.bmc.2010.08.022  0.44
2010 Komiyama T, Sato TR, O'Connor DH, Zhang YX, Huber D, Hooks BM, Gabitto M, Svoboda K. Learning-related fine-scale specificity imaged in motor cortex circuits of behaving mice. Nature. 464: 1182-6. PMID 20376005 DOI: 10.1038/Nature08897  1
2010 O'Connor DH, Clack NG, Huber D, Komiyama T, Myers EW, Svoboda K. Vibrissa-based object localization in head-fixed mice. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 1947-67. PMID 20130203 DOI: 10.1523/Jneurosci.3762-09.2010  1
2010 Krishnaswamy S, Kabir ME, Miyamoto M, Furuichi Y, Komiyama T. Different buffer effects in selecting HM-1 killer toxin single-chain fragment variable anti-idiotypic antibodies. Journal of Biochemistry. 147: 723-33. PMID 20097900 DOI: 10.1093/jb/mvq006  0.44
2010 Kabir ME, Krishnaswamy S, Miyamoto M, Furuichi Y, Komiyama T. Purification and functional characterization of a Camelid-like single-domain antimycotic antibody by engineering in affinity tag. Protein Expression and Purification. 72: 59-65. PMID 20060473 DOI: 10.1016/j.pep.2010.01.002  0.44
2009 Kabir ME, Krishnaswamy S, Miyamoto M, Furuichi Y, Komiyama T. An improved phage-display panning method to produce an HM-1 killer toxin anti-idiotypic antibody. Bmc Biotechnology. 9: 99. PMID 20003392 DOI: 10.1186/1472-6750-9-99  0.44
2009 Krishnaswamy S, Kabir ME, Miyamoto M, Furuichi Y, Komiyama T. Cloning antifungal single chain fragment variable antibodies by phage display and competitive panning elution. Analytical Biochemistry. 395: 16-24. PMID 19665444 DOI: 10.1016/j.ab.2009.08.003  0.44
2008 Jin L, Kryukov K, Clemente JC, Komiyama T, Suzuki Y, Imanishi T, Ikeo K, Gojobori T. The evolutionary relationship between gene duplication and alternative splicing. Gene. 427: 19-31. PMID 18835337 DOI: 10.1016/j.gene.2008.09.002  0.56
2008 Rahman MM, Ichiyanagi T, Komiyama T, Sato S, Konishi T. Effects of anthocyanins on psychological stress-induced oxidative stress and neurotransmitter status. Journal of Agricultural and Food Chemistry. 56: 7545-50. PMID 18662010 DOI: 10.1021/Jf800930S  0.44
2007 Spletter ML, Liu J, Liu J, Su H, Giniger E, Komiyama T, Quake S, Luo L. Lola regulates Drosophila olfactory projection neuron identity and targeting specificity. Neural Development. 2: 14. PMID 17634136 DOI: 10.1186/1749-8104-2-14  1
2007 Muntasir HA, Hossain M, Bhuiyan MA, Komiyama T, Nakamura T, Ozaki M, Nagatomo T. Identification of a key amino acid of the human 5-HT(2B) serotonin receptor important for sarpogrelate binding. Journal of Pharmacological Sciences. 104: 274-7. PMID 17609583 DOI: JST.JSTAGE/jphs/SC0060241  0.44
2007 Matsuzawa D, Hashimoto K, Miyatake R, Shirayama Y, Shimizu E, Maeda K, Suzuki Y, Mashimo Y, Sekine Y, Inada T, Ozaki N, Iwata N, Harano M, Komiyama T, Yamada M, et al. Identification of functional polymorphisms in the promoter region of the human PICK1 gene and their association with methamphetamine psychosis. The American Journal of Psychiatry. 164: 1105-14. PMID 17606663 DOI: 10.1176/appi.ajp.164.7.1105  0.56
2007 Komiyama T, Luo L. Intrinsic control of precise dendritic targeting by an ensemble of transcription factors. Current Biology : Cb. 17: 278-85. PMID 17276922 DOI: 10.1016/J.Cub.2006.11.067  1
2007 Komiyama T, Sweeney LB, Schuldiner O, Garcia KC, Luo L. Graded expression of semaphorin-1a cell-autonomously directs dendritic targeting of olfactory projection neurons. Cell. 128: 399-410. PMID 17254975 DOI: 10.1016/J.Cell.2006.12.028  1
2007 Sweeney LB, Couto A, Chou YH, Berdnik D, Dickson BJ, Luo L, Komiyama T. Temporal target restriction of olfactory receptor neurons by Semaphorin-1a/PlexinA-mediated axon-axon interactions. Neuron. 53: 185-200. PMID 17224402 DOI: 10.1016/J.Neuron.2006.12.022  1
2006 Ahmed M, Muntasir HA, Hossain M, Ishiguro M, Komiyama T, Muramatsu I, Kurose H, Nagatomo T. Beta-blockers show inverse agonism to a novel constitutively active mutant of beta1-adrenoceptor. Journal of Pharmacological Sciences. 102: 167-72. PMID 17031074 DOI: JST.JSTAGE/jphs/FP0060640  0.44
2006 Rahman MM, Ichiyanagi T, Komiyama T, Hatano Y, Konishi T. Superoxide radical- and peroxynitrite-scavenging activity of anthocyanins; structure-activity relationship and their synergism. Free Radical Research. 40: 993-1002. PMID 17015281 DOI: 10.1080/10715760600815322  0.44
2006 Miyamoto M, Onozato N, Selvakumar D, Kimura T, Furuichi Y, Komiyama T. The role of the histidine-35 residue in the cytocidal action of HM-1 killer toxin. Microbiology (Reading, England). 152: 2951-8. PMID 17005976 DOI: 10.1099/mic.0.29100-0  0.44
2006 Muntasir HA, Rashid M, Komiyama T, Kawakami J, Nagatomo T. Identification of amino acid residues important for sarpogrelate binding to the human 5-hydroxytryptamine2A serotonin receptor. Journal of Pharmacological Sciences. 102: 55-63. PMID 16974069 DOI: JST.JSTAGE/jphs/FP0060171  0.44
2006 Selvakumar D, Karim N, Miyamoto M, Furuichi Y, Komiyama T. Recombinant single-chain anti-idiotypic antibody: an effective fungal beta-1,3-glucan synthase inhibitor. Biological & Pharmaceutical Bulletin. 29: 1848-53. PMID 16946497 DOI: 10.1248/Bpb.29.1848  0.44
2006 Selvakumar D, Miyamoto M, Furuichi Y, Komiyama T. Inhibition of fungal beta-1,3-glucan synthase and cell growth by HM-1 killer toxin single-chain anti-idiotypic antibodies. Antimicrobial Agents and Chemotherapy. 50: 3090-7. PMID 16940106 DOI: 10.1128/Aac.01435-05  0.44
2006 Selvakumar D, Miyamoto M, Furuichi Y, Komiyama T. Inhibition of beta-1,3-glucan synthase and cell growth of Cryptococcus species by recombinant single-chain anti-idiotypic antibodies. The Journal of Antibiotics. 59: 73-9. PMID 16629406 DOI: 10.1038/Ja.2006.10  0.44
2006 Selvakumar D, Zhang QZ, Miyamoto M, Furuichi Y, Komiyama T. Identification and characterization of a neutralizing monoclonal antibody for the epitope on HM-1 killer toxin. Journal of Biochemistry. 139: 399-406. PMID 16567405 DOI: 10.1093/Jb/Mvj042  0.44
2006 Komiyama T, Luo L. Development of wiring specificity in the olfactory system. Current Opinion in Neurobiology. 16: 67-73. PMID 16377177 DOI: 10.1016/J.Conb.2005.12.002  1
2005 Miyamoto M, Han GD, Kimura T, Furuichi Y, Komiyama T. Alanine-scanning mutagenesis of HM-1 killer toxin and the essential residues for killing activity. Journal of Biochemistry. 137: 517-22. PMID 15858176 DOI: 10.1093/jb/mvi063  0.44
2005 Jefferis GS, Marin EC, Komiyama T, Zhu H, Chihara T, Berdnik D, Luo L. Development of wiring specificity of the Drosophila olfactory system. Chemical Senses. 30: i94. PMID 15738213 DOI: 10.1093/Chemse/Bjh130  1
2004 Komiyama T, Carlson JR, Luo L. Olfactory receptor neuron axon targeting: intrinsic transcriptional control and hierarchical interactions. Nature Neuroscience. 7: 819-25. PMID 15247920 DOI: 10.1038/Nn1284  1
2004 Komiyama T, Zhang QZ, Miyamoto M, Selvakumar D, Furuichi Y. Monoclonal antibodies and sandwich ELISA for quantitation of HM-1 killer toxin. Biological & Pharmaceutical Bulletin. 27: 691-3. PMID 15133246 DOI: 10.1248/Bpb.27.691  0.44
2004 Jefferis GS, Komiyama T, Luo L. Neuroscience. Calcium and CREST for healthy dendrites. Science (New York, N.Y.). 303: 179-81. PMID 14715999 DOI: 10.1126/Science.1093472  1
2003 Komiyama T, Johnson WA, Luo L, Jefferis GS. From lineage to wiring specificity. POU domain transcription factors control precise connections of Drosophila olfactory projection neurons. Cell. 112: 157-67. PMID 12553905 DOI: 10.1016/S0092-8674(03)00030-8  1
2002 Komiyama T, Kimura T, Furuichi Y. Round shape enlargement of the yeast spheroplast of Saccharomyces cerevisiae by HM-1 toxin. Biological & Pharmaceutical Bulletin. 25: 959-65. PMID 12186426 DOI: 10.1248/Bpb.25.959  0.44
2002 Marin EC, Jefferis GS, Komiyama T, Zhu H, Luo L. Representation of the glomerular olfactory map in the Drosophila brain. Cell. 109: 243-55. PMID 12007410 DOI: 10.1016/S0092-8674(02)00700-6  1
2002 Nishizumi H, Komiyama T, Miyabayashi T, Sakano S, Sakano H. BET, a novel neuronal transmembrane protein with multiple EGF-like motifs. Neuroreport. 13: 909-15. PMID 11997712 DOI: 10.1097/00001756-200205070-00035  1
2000 Shirai T, Kimura T, Furuichi Y, Komiyama T. The involvement of two specific arginine residues in the action of HM-1 killer toxin was deduced from site-directed mutagenesis. Biological & Pharmaceutical Bulletin. 23: 998-1000. PMID 10963311  0.44
1998 Komiyama T, Shirai T, Ohta T, Urakami H, Furuichi Y, Ohta Y, Tsukada Y. Action properties of HYI killer toxin from Williopsis saturnus var. saturnus, and antibiotics, aculeacin A and papulacandin B. Biological & Pharmaceutical Bulletin. 21: 1013-9. PMID 9821802 DOI: 10.1248/Bpb.21.1013  0.44
1996 Komiyama T, Ohta T, Urakami H, Shiratori Y, Takasuka T, Satoh M, Watanabe T, Furuichi Y. Pore formation on proliferating yeast Saccharomyces cerevisiae cell buds by HM-1 killer toxin. Journal of Biochemistry. 119: 731-6. PMID 8743576 DOI: 10.1093/Oxfordjournals.Jbchem.A021303  0.44
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