| Year |
Citation |
Score |
| 2024 |
Castillo SR, Simone BW, Clark KJ, Devaux P, Ekker SC. Unconstrained precision mitochondrial genome editing with αDdCBEs. Human Gene Therapy. PMID 39212664 DOI: 10.1089/hum.2024.073 |
0.591 |
|
| 2024 |
Castillo SR, Simone BW, Clark KJ, Devaux P, Ekker SC. Unconstrained Precision Mitochondrial Genome Editing with αDdCBEs. Biorxiv : the Preprint Server For Biology. PMID 38798498 DOI: 10.1101/2024.05.13.593977 |
0.59 |
|
| 2024 |
Shams S, Olson S, Ekker MP, Salmi A, Ekker SC, Pierret C. The InSciEdRS View: A User-Friendly and Accessible Microscope with Easy-to-Follow Companion Curricula. Zebrafish. 21: 101-108. PMID 38621211 DOI: 10.1089/zeb.2023.0093 |
0.447 |
|
| 2023 |
Kar B, Castillo SR, Sabharwal A, Clark KJ, Ekker SC. Mitochondrial Base Editing: Recent Advances towards Therapeutic Opportunities. International Journal of Molecular Sciences. 24. PMID 36982871 DOI: 10.3390/ijms24065798 |
0.576 |
|
| 2022 |
Sabharwal A, Wishman MD, Cervera RL, Serres MR, Anderson JL, Holmberg SR, Kar B, Treichel AJ, Ichino N, Liu W, Yang J, Ding Y, Deng Y, Lacey JM, Laxen WJ, ... ... Ekker SC, et al. Genetic therapy in a mitochondrial disease model suggests a critical role for liver dysfunction in mortality. Elife. 11. PMID 36408801 DOI: 10.7554/eLife.65488 |
0.578 |
|
| 2022 |
Ding Y, Lang D, Yan J, Bu H, Li H, Jiao K, Yang J, Ni H, Morotti S, Le T, Clark KJ, Port J, Ekker SC, Cao H, Zhang Y, et al. A phenotype-based forward genetic screen identifies as a sick sinus syndrome gene. Elife. 11. PMID 36255053 DOI: 10.7554/eLife.77327 |
0.618 |
|
| 2022 |
Sabharwal A, Campbell JM, Schwab TL, WareJoncas Z, Wishman MD, Ata H, Liu W, Ichino N, Hunter DE, Bergren JD, Urban MD, Urban RM, Holmberg SR, Kar B, Cook A, ... ... Ekker SC, et al. A Primer Genetic Toolkit for Exploring Mitochondrial Biology and Disease Using Zebrafish. Genes. 13. PMID 35893052 DOI: 10.3390/genes13081317 |
0.591 |
|
| 2022 |
Liu F, Kambakam S, Almeida MP, Ming Z, Welker JM, Wierson WA, Schultz-Rogers LE, Ekker SC, Clark KJ, Essner JJ, McGrail M. Cre/ regulated conditional rescue and inactivation with zebrafish UFlip alleles generated by CRISPR-Cas9 targeted integration. Elife. 11. PMID 35713402 DOI: 10.7554/eLife.71478 |
0.641 |
|
| 2022 |
Kar B, Sabharwal A, Restrepo-Castillo S, Simone BW, Clark KJ, Ekker SC. An optimized FusX assembly-based technique to introduce mitochondrial TC-to-TT variations in human cell lines. Star Protocols. 3: 101288. PMID 35496789 DOI: 10.1016/j.xpro.2022.101288 |
0.549 |
|
| 2021 |
Simone BW, Lee HB, Daby CL, Ata H, Restrepo-Castillo S, Martínez-Gálvez G, Kar B, Gendron WAC, Clark KJ, Ekker SC. Chimeric RNA:DNA TracrRNA Improves Homology-Directed Repair and . The Crispr Journal. PMID 34935462 DOI: 10.1089/crispr.2021.0087 |
0.718 |
|
| 2021 |
Sabharwal A, Kar B, Restrepo-Castillo S, Holmberg SR, Mathew ND, Kendall BL, Cotter RP, WareJoncas Z, Seiler C, Nakamaru-Ogiso E, Clark KJ, Ekker SC. The FusX TALE Base Editor (FusXTBE) for Rapid Mitochondrial DNA Programming of Human Cells and Zebrafish Disease Models . The Crispr Journal. 4: 799-821. PMID 34847747 DOI: 10.1089/crispr.2021.0061 |
0.604 |
|
| 2021 |
Welker JM, Wierson WA, Almeida MP, Mann CM, Torrie ME, Ming Z, Ekker SC, Clark KJ, Dobbs DL, Essner JJ, McGrail M. GeneWeld: Efficient Targeted Integration Directed by Short Homology in Zebrafish. Bio-Protocol. 11: e4100. PMID 34395736 DOI: 10.21769/BioProtoc.4100 |
0.609 |
|
| 2021 |
Saha K, Sontheimer EJ, Brooks PJ, Dwinell MR, Gersbach CA, Liu DR, Murray SA, Tsai SQ, Wilson RC, Anderson DG, Asokan A, Banfield JF, Bankiewicz KS, Bao G, Bulte JWM, ... ... Ekker SC, et al. The NIH Somatic Cell Genome Editing program. Nature. 592: 195-204. PMID 33828315 DOI: 10.1038/s41586-021-03191-1 |
0.594 |
|
| 2021 |
Almeida MP, Welker JM, Siddiqui S, Luiken J, Ekker SC, Clark KJ, Essner JJ, McGrail M. Endogenous zebrafish proneural Cre drivers generated by CRISPR/Cas9 short homology directed targeted integration. Scientific Reports. 11: 1732. PMID 33462297 DOI: 10.1038/s41598-021-81239-y |
0.604 |
|
| 2020 |
Koleilat A, Dugdale JA, Christenson TA, Bellah JL, Lambert AM, Masino MA, Ekker SC, Schimmenti LA. L-type voltage-gated calcium channel agonists mitigate hearing loss and modify ribbon synapse morphology in the zebrafish model of Usher syndrome type 1 Disease Models & Mechanisms. 13. PMID 33361086 DOI: 10.1242/dmm.043885 |
0.628 |
|
| 2020 |
Koleilat A, Argue DP, Schimmenti LA, Ekker SC, Poling GL. The GoAudio Quantitative Mobile Audiology Test Enhances Access to Clinical Hearing Assessments. American Journal of Audiology. 1-11. PMID 33079580 DOI: 10.1044/2020_AJA-20-00060 |
0.488 |
|
| 2020 |
Ichino N, Serres MR, Urban RM, Urban MD, Treichel AJ, Schaefbauer KJ, Greif LE, Varshney GK, Skuster KJ, McNulty MS, Daby CL, Wang Y, Liao HK, El-Rass S, Ding Y, ... ... Ekker SC, et al. Building the vertebrate codex using the gene breaking protein trap library. Elife. 9. PMID 32779569 DOI: 10.7554/Elife.54572 |
0.755 |
|
| 2020 |
Wierson WA, Welker JM, Almeida MP, Mann CM, Webster DA, Torrie ME, Weiss TJ, Kambakam S, Vollbrecht MK, Lan M, McKeighan KC, Levey J, Ming Z, Wehmeier A, Mikelson CS, ... ... Ekker SC, et al. Efficient targeted integration directed by short homology in zebrafish and mammalian cells. Elife. 9. PMID 32412410 DOI: 10.7554/Elife.53968 |
0.658 |
|
| 2020 |
Ma X, Zhu P, Ding Y, Zhang H, Qiu Q, Dvornikov AV, Wang Z, Kim M, Wang Y, Lowerison M, Yu Y, Norton N, Herrmann J, Ekker SC, Hsiai TK, et al. Retinoid X receptor alpha is a spatiotemporally predominant therapeutic target for anthracycline-induced cardiotoxicity. Science Advances. 6: eaay2939. PMID 32064346 DOI: 10.1126/Sciadv.Aay2939 |
0.359 |
|
| 2020 |
Ichino N, Serres MR, Urban RM, Urban MD, Treichel AJ, Schaefbauer KJ, Greif LE, Varshney GK, Skuster KJ, McNulty MS, Daby CL, Wang Y, Liao H, El-Rass S, Ding Y, ... ... Ekker SC, et al. Author response: Building the vertebrate codex using the gene breaking protein trap library Elife. DOI: 10.7554/Elife.54572.Sa2 |
0.711 |
|
| 2020 |
Wierson WA, Welker JM, Almeida MP, Mann CM, Webster DA, Torrie ME, Weiss TJ, Kambakam S, Vollbrecht MK, Lan M, McKeighan KC, Levey J, Ming Z, Wehmeier A, Mikelson CS, ... ... Ekker SC, et al. Author response: Efficient targeted integration directed by short homology in zebrafish and mammalian cells Elife. DOI: 10.7554/Elife.53968.Sa2 |
0.603 |
|
| 2020 |
Druliner BR, Simone B, Munoz-Gomez M, Kossick K, O'Brien D, Abyzov A, Ekker S, Boardman LA. Abstract A33: Characterizing telomere and chromatin dynamics in colorectal cell transformation Cancer Research. 80. DOI: 10.1158/1538-7445.Camodels2020-A33 |
0.34 |
|
| 2020 |
Mehra D, Banerjee C, Adhikari S, Clark KJ, Ekker SC, Puchner EM. Characterization of dCas9 Interaction Kinetics and Local Chromatin Structure in Live Human Cells using Palm Superresolution Microscopy Biophysical Journal. 118: 146a. DOI: 10.1016/J.Bpj.2019.11.919 |
0.569 |
|
| 2019 |
Wierson WA, Simone BW, WareJoncas Z, Mann C, Welker JM, Kar B, Emch MJ, Friedberg I, Gendron WAC, Barry MA, Clark KJ, Dobbs DL, McGrail MA, Ekker SC, Essner JJ. Expanding the CRISPR Toolbox with ErCas12a in Zebrafish and Human Cells. The Crispr Journal. PMID 31742435 DOI: 10.1089/crispr.2019.0026 |
0.605 |
|
| 2019 |
Mann CM, Martínez-Gálvez G, Welker JM, Wierson WA, Ata H, Almeida MP, Clark KJ, Essner JJ, McGrail M, Ekker SC, Dobbs D. The Gene Sculpt Suite: a set of tools for genome editing. Nucleic Acids Research. PMID 31127311 DOI: 10.1093/Nar/Gkz405 |
0.635 |
|
| 2018 |
Greenberg-Worisek AJ, Campbell KA, Klee EW, Staff NP, Schimmenti LA, Weavers KM, Ekker SC, Windebank AJ. Case-Based Learning in Translational Biomedical Research Education Provides More Realistic and Adaptive Skills for Early-Career Scientists Than Didactic Sessions. Academic Medicine : Journal of the Association of American Medical Colleges. PMID 30256254 DOI: 10.1097/Acm.0000000000002470 |
0.522 |
|
| 2018 |
Reiman JM, Das B, Sindberg GM, Urban MD, Hammerlund MEM, Lee HB, Spring KM, Lyman-Gingerich J, Generous AR, Koep TH, Ewing K, Lilja P, Enders FT, Ekker SC, Huskins WC, et al. Humidity as a non-pharmaceutical intervention for influenza A. Plos One. 13: e0204337. PMID 30252890 DOI: 10.1371/Journal.Pone.0204337 |
0.507 |
|
| 2018 |
Ata H, Ekstrom TL, Martínez-Gálvez G, Mann CM, Dvornikov AV, Schaefbauer KJ, Ma AC, Dobbs D, Clark KJ, Ekker SC. Robust Activation of Microhomology-mediated End Joining for Precision Gene Editing Applications. Plos Genetics. 14: e1007652. PMID 30208061 DOI: 10.1371/Journal.Pgen.1007652 |
0.677 |
|
| 2018 |
Ignatius MS, Hayes MN, Moore FE, Tang Q, Garcia SP, Blackburn PR, Baxi K, Wang L, Jin A, Ramakrishnan A, Reeder S, Chen Y, Nielsen GP, Chen EY, Hasserjian RP, ... ... Ekker SC, et al. deficiency causes a wide tumor spectrum and increases embryonal rhabdomyosarcoma metastasis in zebrafish. Elife. 7. PMID 30192230 DOI: 10.7554/Elife.37202 |
0.552 |
|
| 2018 |
WareJoncas Z, Campbell JM, Martínez-Gálvez G, Gendron WAC, Barry MA, Harris PC, Sussman CR, Ekker SC. Precision gene editing technology and applications in nephrology. Nature Reviews. Nephrology. PMID 30089813 DOI: 10.1038/S41581-018-0047-X |
0.382 |
|
| 2018 |
Simone BW, Martínez-Gálvez G, WareJoncas Z, Ekker SC. Fishing for understanding: Unlocking the zebrafish gene editor's toolbox. Methods (San Diego, Calif.). PMID 30076892 DOI: 10.1016/J.Ymeth.2018.07.012 |
0.386 |
|
| 2017 |
Ding Y, Long PA, Bos JM, Shih YH, Ma X, Sundsbak RS, Chen J, Jiang Y, Zhao L, Hu X, Wang J, Shi Y, Ackerman MJ, Lin X, Ekker SC, et al. A modifier screen identifies DNAJB6 as a cardiomyopathy susceptibility gene. Jci Insight. 2. PMID 28422763 DOI: 10.1172/Jci.Insight.94086 |
0.357 |
|
| 2017 |
El-Rass S, Eisa-Beygi S, Khong E, Brand-Arzamendi K, Mauro A, Zhang H, Clark KJ, Ekker SC, Wen XY. Disruption of pdgfra alters endocardial and myocardial fusion during zebrafish cardiac assembly. Biology Open. PMID 28167492 DOI: 10.1242/Bio.021212 |
0.614 |
|
| 2016 |
Ma AC, Chen Y, Blackburn PR, Ekker SC. TALEN-Mediated Mutagenesis and Genome Editing. Methods in Molecular Biology (Clifton, N.J.). 1451: 17-30. PMID 27464798 DOI: 10.1007/978-1-4939-3771-4_2 |
0.351 |
|
| 2016 |
Ata H, Clark KJ, Ekker SC. The zebrafish genome editing toolkit. Methods in Cell Biology. 135: 149-70. PMID 27443924 DOI: 10.1016/Bs.Mcb.2016.04.023 |
0.641 |
|
| 2016 |
Blackburn PR, Hickey RD, Nace RA, Giama NH, Kraft DL, Bordner AJ, Chaiteerakij R, McCormick JB, Radulovic M, Graham RP, Torbenson MS, Tortorelli S, Scott CR, Lindor NM, Milliner DS, ... ... Ekker SC, et al. Silent Tyrosinemia Type I Without Elevated Tyrosine or Succinylacetone Associated With Liver Cirrhosis and Hepatocellular Carcinoma. Human Mutation. PMID 27397503 DOI: 10.1002/Humu.23047 |
0.582 |
|
| 2016 |
Martínez-Gálvez G, Ata H, Jarryd CM, Ekker SC. ssDNA and the Argonautes: the quest for the next Golden Editor. Human Gene Therapy. PMID 27230540 DOI: 10.1089/Hum.2016.071 |
0.356 |
|
| 2016 |
Welker JM, Wierson WA, Wang Y, McNulty MS, Tanya PL, Tisdale EE, Solin SL, Ekker SC, Clark KJ, McGrail MA, Essner JJ. GoldyTALEN Vectors with Improved Efficiency for Golden Gate TALEN Assembly. Human Gene Therapy. PMID 27094430 DOI: 10.1089/Hum.2016.012 |
0.613 |
|
| 2016 |
Ni J, Wangensteen KJ, Nelsen D, Balciunas D, Skuster KJ, Urban MD, Ekker SC. Active recombinant Tol2 transposase for gene transfer and gene discovery applications. Mobile Dna. 7: 6. PMID 27042235 DOI: 10.1186/S13100-016-0062-Z |
0.682 |
|
| 2016 |
Leveque RE, Clark KJ, Ekker SC. Mayo Clinic Zebrafish Facility Overview. Zebrafish. PMID 27023741 DOI: 10.1089/Zeb.2015.1227 |
0.622 |
|
| 2016 |
Ma AC, McNulty MS, Tanya PL, Jarryd CM, Martínez-Gálvez G, Argue DP, Lee HB, Urban MD, Bullard CE, Blackburn PR, Man TK, Clark KJ, Ekker SC. FusX: A rapid one-step TALE assembly system for genome science. Human Gene Therapy. PMID 26854857 DOI: 10.1089/Hum.2015.172 |
0.723 |
|
| 2015 |
Westcot SE, Hatzold J, Urban MD, Richetti SK, Skuster KJ, Harm RM, Lopez Cervera R, Umemoto N, McNulty MS, Clark KJ, Hammerschmidt M, Ekker SC. Protein-Trap Insertional Mutagenesis Uncovers New Genes Involved in Zebrafish Skin Development, Including a Neuregulin 2a-Based ErbB Signaling Pathway Required during Median Fin Fold Morphogenesis. Plos One. 10: e0130688. PMID 26110643 DOI: 10.1371/Journal.Pone.0130688 |
0.646 |
|
| 2015 |
Craig MP, Grajevskaja V, Liao HK, Balciuniene J, Ekker SC, Park JS, Essner JJ, Balciunas D, Sumanas S. Etv2 and fli1b function together as key regulators of vasculogenesis and angiogenesis. Arteriosclerosis, Thrombosis, and Vascular Biology. 35: 865-76. PMID 25722433 DOI: 10.1161/Atvbaha.114.304768 |
0.651 |
|
| 2015 |
Bedell VM, Ekker SC. Using engineered endonucleases to create knockout and knockin zebrafish models. Methods in Molecular Biology (Clifton, N.J.). 1239: 291-305. PMID 25408414 DOI: 10.1007/978-1-4939-1862-1_17 |
0.336 |
|
| 2015 |
Blackburn P, Hickey R, Nace R, Giama NH, Chaiteerakij R, Bordner A, Kraft D, Oglesbee D, Al-Qabandi W, Grompe M, Clark KJ, Klee EW, Gavrilov D, Roberts LR, El-Youssef M, ... Ekker SC, et al. 549 Tyrosinemia Without Succinylacetone: Modeling a Novel Mutation in FAH in Family With Early Onset Cirrhosis and Hepatocellular Carcinoma Gastroenterology. 148: S-111. DOI: 10.1016/S0016-5085(15)30381-4 |
0.563 |
|
| 2014 |
Peng Y, Clark KJ, Campbell JM, Panetta MR, Guo Y, Ekker SC. Making designer mutants in model organisms. Development (Cambridge, England). 141: 4042-54. PMID 25336735 DOI: 10.1242/Dev.102186 |
0.63 |
|
| 2013 |
Campbell JM, Hartjes KA, Nelson TJ, Xu X, Ekker SC. New and TALENted genome engineering toolbox. Circulation Research. 113: 571-87. PMID 23948583 DOI: 10.1161/Circresaha.113.301765 |
0.358 |
|
| 2013 |
Ma AC, Lee HB, Clark KJ, Ekker SC. High efficiency In Vivo genome engineering with a simplified 15-RVD GoldyTALEN design. Plos One. 8: e65259. PMID 23734242 DOI: 10.1371/Journal.Pone.0065259 |
0.719 |
|
| 2013 |
Tietz Bogert PS, Huang BQ, Gradilone SA, Masyuk TV, Moulder GL, Ekker SC, Larusso NF. The zebrafish as a model to study polycystic liver disease. Zebrafish. 10: 211-7. PMID 23668934 DOI: 10.1089/Zeb.2012.0825 |
0.314 |
|
| 2013 |
Patowary A, Purkanti R, Singh M, Chauhan R, Singh AR, Swarnkar M, Singh N, Pandey V, Torroja C, Clark MD, Kocher JP, Clark KJ, Stemple DL, Klee EW, Ekker SC, et al. A sequence-based variation map of zebrafish. Zebrafish. 10: 15-20. PMID 23590399 DOI: 10.1089/Zeb.2012.0848 |
0.636 |
|
| 2013 |
Blackburn PR, Campbell JM, Clark KJ, Ekker SC. The CRISPR system--keeping zebrafish gene targeting fresh. Zebrafish. 10: 116-8. PMID 23536990 DOI: 10.1089/Zeb.2013.9999 |
0.641 |
|
| 2013 |
Chen Z, Lee H, Henle SJ, Cheever TR, Ekker SC, Henley JR. Primary neuron culture for nerve growth and axon guidance studies in zebrafish (Danio rerio). Plos One. 8: e57539. PMID 23469201 DOI: 10.1371/Journal.Pone.0057539 |
0.71 |
|
| 2013 |
Neff KL, Argue DP, Ma AC, Lee HB, Clark KJ, Ekker SC. Mojo Hand, a TALEN design tool for genome editing applications. Bmc Bioinformatics. 14: 1. PMID 23323762 DOI: 10.1186/1471-2105-14-1 |
0.705 |
|
| 2013 |
Ding Y, Liu W, Deng Y, Jomok B, Yang J, Huang W, Clark KJ, Zhong TP, Lin X, Ekker SC, Xu X. Trapping cardiac recessive mutants via expression-based insertional mutagenesis screening. Circulation Research. 112: 606-17. PMID 23283723 DOI: 10.1161/Circresaha.112.300603 |
0.63 |
|
| 2013 |
Khurana S, Buckley S, Schouteden S, Ekker S, Petryk A, Delforge M, Zwijsen A, Verfaillie CM. A novel role of BMP4 in adult hematopoietic stem and progenitor cell homing via Smad independent regulation of integrin-α4 expression. Blood. 121: 781-90. PMID 23243277 DOI: 10.1182/Blood-2012-07-446443 |
0.311 |
|
| 2012 |
Sohni A, Mulas F, Ferrazzi F, Luttun A, Bellazzi R, Huylebroeck D, Ekker SC, Verfaillie CM. TGFβ1-induced Baf60c regulates both smooth muscle cell commitment and quiescence. Plos One. 7: e47629. PMID 23110084 DOI: 10.1371/Journal.Pone.0047629 |
0.356 |
|
| 2012 |
Hoffman SJ, Psaltis PJ, Clark KJ, Spoon DB, Chue CD, Ekker SC, Simari RD. An in vivo method to quantify lymphangiogenesis in zebrafish. Plos One. 7: e45240. PMID 23028871 DOI: 10.1371/Journal.Pone.0045240 |
0.619 |
|
| 2012 |
Bedell VM, Wang Y, Campbell JM, Poshusta TL, Starker CG, Krug RG, Tan W, Penheiter SG, Ma AC, Leung AY, Fahrenkrug SC, Carlson DF, Voytas DF, Clark KJ, Essner JJ, ... Ekker SC, et al. In vivo genome editing using a high-efficiency TALEN system. Nature. 491: 114-8. PMID 23000899 DOI: 10.1038/Nature11537 |
0.8 |
|
| 2012 |
Hoeppner LH, Phoenix KN, Clark KJ, Bhattacharya R, Gong X, Sciuto TE, Vohra P, Suresh S, Bhattacharya S, Dvorak AM, Ekker SC, Dvorak HF, Claffey KP, Mukhopadhyay D. Revealing the role of phospholipase Cβ3 in the regulation of VEGF-induced vascular permeability. Blood. 120: 2167-73. PMID 22674805 DOI: 10.1182/Blood-2012-03-417824 |
0.613 |
|
| 2012 |
McNulty MS, Bedell VM, Greenwood TM, Craig TA, Ekker SC, Kumar R. Expression of sclerostin in the developing zebrafish (Danio rerio) brain and skeleton. Gene Expression Patterns : Gep. 12: 228-35. PMID 22575304 DOI: 10.1016/J.Gep.2012.04.003 |
0.352 |
|
| 2012 |
Xu J, Gao J, Li J, Xue L, Clark KJ, Ekker SC, Du SJ. Functional analysis of slow myosin heavy chain 1 and myomesin-3 in sarcomere organization in zebrafish embryonic slow muscles. Journal of Genetics and Genomics = Yi Chuan Xue Bao. 39: 69-80. PMID 22361506 DOI: 10.1016/J.Jgg.2012.01.005 |
0.597 |
|
| 2012 |
Liao HK, Wang Y, Noack Watt KE, Wen Q, Breitbach J, Kemmet CK, Clark KJ, Ekker SC, Essner JJ, McGrail M. Tol2 gene trap integrations in the zebrafish amyloid precursor protein genes appa and aplp2 reveal accumulation of secreted APP at the embryonic veins. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 241: 415-25. PMID 22275008 DOI: 10.1002/Dvdy.23725 |
0.619 |
|
| 2012 |
Bedell VM, Person AD, Larson JD, McLoon A, Balciunas D, Clark KJ, Neff KI, Nelson KE, Bill BR, Schimmenti LA, Beiraghi S, Ekker SC. The lineage-specific gene ponzr1 is essential for zebrafish pronephric and pharyngeal arch development. Development (Cambridge, England). 139: 793-804. PMID 22274699 DOI: 10.1242/Dev.071720 |
0.802 |
|
| 2012 |
Klee EW, Schneider H, Clark KJ, Cousin MA, Ebbert JO, Hooten WM, Karpyak VM, Warner DO, Ekker SC. Zebrafish: a model for the study of addiction genetics. Human Genetics. 131: 977-1008. PMID 22207143 DOI: 10.1007/S00439-011-1128-0 |
0.58 |
|
| 2012 |
Clark KJ, Argue DP, Petzold AM, Ekker SC. zfishbook: connecting you to a world of zebrafish revertible mutants. Nucleic Acids Research. 40: D907-11. PMID 22067444 DOI: 10.1093/Nar/Gkr957 |
0.796 |
|
| 2011 |
Ma AC, Fung TK, Lin RH, Chung MI, Yang D, Ekker SC, Leung AY. Methionine aminopeptidase 2 is required for HSC initiation and proliferation. Blood. 118: 5448-57. PMID 21937698 DOI: 10.1182/Blood-2011-04-350173 |
0.345 |
|
| 2011 |
Clark KJ, Voytas DF, Ekker SC. A TALE of two nucleases: gene targeting for the masses? Zebrafish. 8: 147-9. PMID 21929364 DOI: 10.1089/Zeb.2011.9993 |
0.651 |
|
| 2011 |
Clark KJ, Urban MD, Skuster KJ, Ekker SC. Transgenic zebrafish using transposable elements. Methods in Cell Biology. 104: 137-49. PMID 21924161 DOI: 10.1016/B978-0-12-374814-0.00008-2 |
0.6 |
|
| 2011 |
Ding Y, Sun X, Huang W, Hoage T, Redfield M, Kushwaha S, Sivasubbu S, Lin X, Ekker S, Xu X. Haploinsufficiency of target of rapamycin attenuates cardiomyopathies in adult zebrafish Circulation Research. 109: 658-669. PMID 21757652 DOI: 10.1161/Circresaha.111.248260 |
0.305 |
|
| 2011 |
Bedell VM, Westcot SE, Ekker SC. Lessons from morpholino-based screening in zebrafish. Briefings in Functional Genomics. 10: 181-8. PMID 21746693 DOI: 10.1093/Bfgp/Elr021 |
0.346 |
|
| 2011 |
Clark KJ, Boczek NJ, Ekker SC. Stressing zebrafish for behavioral genetics. Reviews in the Neurosciences. 22: 49-62. PMID 21615261 DOI: 10.1515/Rns.2011.007 |
0.589 |
|
| 2011 |
Clark KJ, Balciunas D, Pogoda HM, Ding Y, Westcot SE, Bedell VM, Greenwood TM, Urban MD, Skuster KJ, Petzold AM, Ni J, Nielsen AL, Patowary A, Scaria V, Sivasubbu S, ... ... Ekker SC, et al. In vivo protein trapping produces a functional expression codex of the vertebrate proteome. Nature Methods. 8: 506-15. PMID 21552255 DOI: 10.1038/Nmeth.1606 |
0.809 |
|
| 2011 |
Alexandre D, Alonzeau J, Bill BR, Ekker SC, Waschek JA. Expression analysis of PAC1-R and PACAP genes in zebrafish embryos. Journal of Molecular Neuroscience : Mn. 43: 94-100. PMID 20526695 DOI: 10.1007/S12031-010-9397-Y |
0.743 |
|
| 2011 |
Westcot SE, Clark KJ, Skuster K, Urban M, Moulder G, Greenwood TM, Balciunas D, Sivasubbu S, Ekker SC. How to skin a fish: The Zebrafish Integument Project and novel epidermal mutant wicked witch of the Midwest Developmental Biology. 356: 158. DOI: 10.1016/J.Ydbio.2011.05.586 |
0.598 |
|
| 2011 |
Bedell VM, Person A, Larson J, McLoon A, Balciunas D, Clark K, Nelson K, Bill B, Schimmenti L, Beiraghi S, Ekker S. Vertebrate kidney innovation by ponzr1 Developmental Biology. 356: 255. DOI: 10.1016/J.Ydbio.2011.05.579 |
0.747 |
|
| 2010 |
Huang X, Guo H, Tammana S, Jung YC, Mellgren E, Bassi P, Cao Q, Tu ZJ, Kim YC, Ekker SC, Wu X, Wang SM, Zhou X. Erratum: Gene transfer efficiency and genome-wide integration profiling of sleeping beauty, tol2, and piggyBac transposons in human primary t cells (Molecular Therapy (2010) 18 (1803-1813) DOI:10.1038/mt.2010.141) Molecular Therapy. 18. PMID 28178454 DOI: 10.1038/Mt.2010.168 |
0.315 |
|
| 2010 |
Wang Y, Kaiser MS, Larson JD, Nasevicius A, Clark KJ, Wadman SA, Roberg-Perez SE, Ekker SC, Hackett PB, McGrail M, Essner JJ. Moesin1 and Ve-cadherin are required in endothelial cells during in vivo tubulogenesis. Development (Cambridge, England). 137: 3119-28. PMID 20736288 DOI: 10.1242/Dev.048785 |
0.782 |
|
| 2010 |
He Z, Zhang H, Zhang X, Xie D, Chen Y, Wangensteen KJ, Ekker SC, Firpo M, Liu C, Xiang D, Zi X, Hui L, Yang G, Ding X, Hu Y, et al. Liver xeno-repopulation with human hepatocytes in Fah-/-Rag2-/- mice after pharmacological immunosuppression. The American Journal of Pathology. 177: 1311-9. PMID 20651238 DOI: 10.2353/Ajpath.2010.091154 |
0.613 |
|
| 2010 |
Huang X, Guo H, Tammana S, Jung YC, Mellgren E, Bassi P, Cao Q, Tu ZJ, Kim YC, Ekker SC, Wu X, Wang SM, Zhou X. Gene transfer efficiency and genome-wide integration profiling of Sleeping Beauty, Tol2, and piggyBac transposons in human primary T cells. Molecular Therapy : the Journal of the American Society of Gene Therapy. 18: 1803-13. PMID 20606646 DOI: 10.1038/Mt.2010.141 |
0.325 |
|
| 2010 |
Petzold AM, Bedell VM, Boczek NJ, Essner JJ, Balciunas D, Clark KJ, Ekker SC. SCORE imaging: specimen in a corrected optical rotational enclosure. Zebrafish. 7: 149-54. PMID 20528262 DOI: 10.1089/Zeb.2010.0660 |
0.766 |
|
| 2010 |
Person AD, Beiraghi S, Sieben CM, Hermanson S, Neumann AN, Robu ME, Schleiffarth JR, Billington CJ, van Bokhoven H, Hoogeboom JM, Mazzeu JF, Petryk A, Schimmenti LA, Brunner HG, Ekker SC, et al. WNT5A mutations in patients with autosomal dominant Robinow syndrome. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 239: 327-37. PMID 19918918 DOI: 10.1002/Dvdy.22156 |
0.562 |
|
| 2009 |
Petzold AM, Balciunas D, Sivasubbu S, Clark KJ, Bedell VM, Westcot SE, Myers SR, Moulder GL, Thomas MJ, Ekker SC. Nicotine response genetics in the zebrafish. Proceedings of the National Academy of Sciences of the United States of America. 106: 18662-7. PMID 19858493 DOI: 10.1073/Pnas.0908247106 |
0.784 |
|
| 2009 |
Keng VW, Ryan BJ, Wangensteen KJ, Balciunas D, Schmedt C, Ekker SC, Largaespada DA. Efficient transposition of Tol2 in the mouse germline. Genetics. 183: 1565-73. PMID 19805821 DOI: 10.1534/Genetics.109.100768 |
0.673 |
|
| 2009 |
Petzold AM, Clark KJ, Ekker SC. Spotlight on the future of scientific publication. Zebrafish. 6: 215-7. PMID 19761376 DOI: 10.1089/Zeb.2009.9992 |
0.743 |
|
| 2009 |
Bill BR, Petzold AM, Clark KJ, Schimmenti LA, Ekker SC. A primer for morpholino use in zebrafish. Zebrafish. 6: 69-77. PMID 19374550 DOI: 10.1089/Zeb.2008.0555 |
0.77 |
|
| 2008 |
Ekker SC, Parichy DM, Cheng KC. Research implications of pigment biology in zebrafish. Zebrafish. 5: 233-5. PMID 19133820 DOI: 10.1089/Zeb.2008.9981 |
0.328 |
|
| 2008 |
Ni J, Clark KJ, Fahrenkrug SC, Ekker SC. Transposon tools hopping in vertebrates. Briefings in Functional Genomics & Proteomics. 7: 444-53. PMID 19109308 DOI: 10.1093/Bfgp/Eln049 |
0.758 |
|
| 2008 |
Bill BR, Balciunas D, McCarra JA, Young ED, Xiong T, Spahn AM, Garcia-Lecea M, Korzh V, Ekker SC, Schimmenti LA. Development and Notch signaling requirements of the zebrafish choroid plexus. Plos One. 3: e3114. PMID 18769591 DOI: 10.1371/Journal.Pone.0003114 |
0.788 |
|
| 2008 |
Ekker SC. Zinc finger-based knockout punches for zebrafish genes. Zebrafish. 5: 121-3. PMID 18554175 DOI: 10.1089/Zeb.2008.9988 |
0.387 |
|
| 2008 |
Chen J, Ekker SC. Modulation of gene expression in the study of zebrafish development - A discussion with James Chen, Ph.D Zebrafish. 5: 93-96. PMID 18554172 DOI: 10.1089/Zeb.2008.9993 |
0.303 |
|
| 2008 |
Wangensteen KJ, Wilber A, Keng VW, He Z, Matise I, Wangensteen L, Carson CM, Chen Y, Steer CJ, McIvor RS, Largaespada DA, Wang X, Ekker SC. A facile method for somatic, lifelong manipulation of multiple genes in the mouse liver. Hepatology (Baltimore, Md.). 47: 1714-24. PMID 18435462 DOI: 10.1002/Hep.22195 |
0.682 |
|
| 2008 |
Knowlton MN, Li T, Ren Y, Bill BR, Ellis LB, Ekker SC. A PATO-compliant zebrafish screening database (MODB): management of morpholino knockdown screen information. Bmc Bioinformatics. 9: 7. PMID 18179718 DOI: 10.1186/1471-2105-9-7 |
0.756 |
|
| 2008 |
Wangensteen KJ, Wilber A, Keng VW, Chen Y, Matise I, Wangensteen L, Steer CJ, McIvor RS, Largaespada DA, Wang X, Ekker SC. A method for lifelong genetic manipulation of regenerating hepatocytes in mouse Cell Research. 18: S31-S31. DOI: 10.1038/Cr.2008.121 |
0.649 |
|
| 2007 |
Ekker SC, Stemple DL, Clark M, Chien CB, Rasooly RS, Javois LC. Zebrafish genome project: bringing new biology to the vertebrate genome field. Zebrafish. 4: 239-51. PMID 18284331 DOI: 10.1089/Zeb.2007.9979 |
0.325 |
|
| 2007 |
Sivasubbu S, Balciunas D, Amsterdam A, Ekker SC. Insertional mutagenesis strategies in zebrafish. Genome Biology. 8: S9. PMID 18047701 DOI: 10.1186/Gb-2007-8-S1-S9 |
0.352 |
|
| 2007 |
Alvarez Y, Cederlund ML, Cottell DC, Bill BR, Ekker SC, Torres-Vazquez J, Weinstein BM, Hyde DR, Vihtelic TS, Kennedy BN. Genetic determinants of hyaloid and retinal vasculature in zebrafish. Bmc Developmental Biology. 7: 114. PMID 17937808 DOI: 10.1186/1471-213X-7-114 |
0.734 |
|
| 2007 |
Robu ME, Larson JD, Nasevicius A, Beiraghi S, Brenner C, Farber SA, Ekker SC. p53 activation by knockdown technologies. Plos Genetics. 3: e78. PMID 17530925 DOI: 10.1371/Journal.Pgen.0030078 |
0.786 |
|
| 2007 |
Schleiffarth JR, Person AD, Martinsen BJ, Sukovich DJ, Neumann A, Baker CV, Lohr JL, Cornfield DN, Ekker SC, Petryk A. Wnt5a is required for cardiac outflow tract septation in mice. Pediatric Research. 61: 386-91. PMID 17515859 DOI: 10.1203/Pdr.0B013E3180323810 |
0.311 |
|
| 2007 |
Wilber A, Wangensteen KJ, Chen Y, Zhuo L, Frandsen JL, Bell JB, Chen ZJ, Ekker SC, McIvor RS, Wang X. Messenger RNA as a source of transposase for sleeping beauty transposon-mediated correction of hereditary tyrosinemia type I. Molecular Therapy : the Journal of the American Society of Gene Therapy. 15: 1280-7. PMID 17440442 DOI: 10.1038/Sj.Mt.6300160 |
0.67 |
|
| 2007 |
Patterson LJ, Gering M, Eckfeldt CE, Green AR, Verfaillie CM, Ekker SC, Patient R. The transcription factors Scl and Lmo2 act together during development of the hemangioblast in zebrafish. Blood. 109: 2389-98. PMID 17090656 DOI: 10.1182/Blood-2006-02-003087 |
0.399 |
|
| 2006 |
Pickart MA, Klee EW, Nielsen AL, Sivasubbu S, Mendenhall EM, Bill BR, Chen E, Eckfeldt CE, Knowlton M, Robu ME, Larson JD, Deng Y, Schimmenti LA, Ellis LB, Verfaillie CM, ... ... Ekker SC, et al. Genome-wide reverse genetics framework to identify novel functions of the vertebrate secretome. Plos One. 1: e104. PMID 17218990 DOI: 10.1371/Journal.Pone.0000104 |
0.812 |
|
| 2006 |
Balciunas D, Wangensteen KJ, Wilber A, Bell J, Geurts A, Sivasubbu S, Wang X, Hackett PB, Largaespada DA, McIvor RS, Ekker SC. Harnessing a high cargo-capacity transposon for genetic applications in vertebrates. Plos Genetics. 2: e169. PMID 17096595 DOI: 10.1371/Journal.Pgen.0020169 |
0.767 |
|
| 2006 |
Sivasubbu S, Balciunas D, Davidson AE, Pickart MA, Hermanson SB, Wangensteen KJ, Wolbrink DC, Ekker SC. Gene-breaking transposon mutagenesis reveals an essential role for histone H2afza in zebrafish larval development. Mechanisms of Development. 123: 513-29. PMID 16859902 DOI: 10.1016/J.Mod.2006.06.002 |
0.791 |
|
| 2006 |
Chen E, Larson JD, Ekker SC. Functional analysis of zebrafish microfibril-associated glycoprotein-1 (Magp1) in vivo reveals roles for microfibrils in vascular development and function. Blood. 107: 4364-74. PMID 16469878 DOI: 10.1182/Blood-2005-02-0789 |
0.602 |
|
| 2006 |
Essner JJ, Chen E, Ekker SC. Syndecan-2. The International Journal of Biochemistry & Cell Biology. 38: 152-6. PMID 16198615 DOI: 10.1016/j.biocel.2005.08.012 |
0.52 |
|
| 2006 |
Wilber A, Wangensteen KJ, Chen Y, Zhou L, Frandsen JL, Bell J, Chen Z, Ekker SC, McIvor RS, Wang X. 405. Correction of the Murine Model of Hereditary Tyrosinemia Type I Using Messenger RNA as a Source of Transposase for Sleeping Beauty Mediated Integration of the FAH Gene Molecular Therapy. 13: S155-S156. DOI: 10.1016/J.Ymthe.2006.08.468 |
0.685 |
|
| 2006 |
Balciunas D, Wilber A, Wangensteen K, Bell J, Geurts A, Hackett PB, Largaespada DA, McIvor RS, Ekker SC. 385. Tol2 Transposon as a Gene Therapy Vector: Characterization, Optimization and Correction of Hereditary Tyrosinemia Type 1 in Mouse Molecular Therapy. 13: S147. DOI: 10.1016/J.Ymthe.2006.08.446 |
0.749 |
|
| 2006 |
Bill BR, DeLuca A, Warman B, Larson JD, Ekker SC, Schimmenti LA. Knockdown of alpha-1-microglobulin bikunin precursor (AMBP) causes ocular, and craniofacial defects Developmental Biology. 295: 463. DOI: 10.1016/J.Ydbio.2006.04.425 |
0.749 |
|
| 2005 |
Balciunas D, Ekker SC. Trapping fish genes with transposons. Zebrafish. 1: 335-41. PMID 18248211 DOI: 10.1089/Zeb.2005.1.335 |
0.383 |
|
| 2005 |
Wilber A, Frandsen JL, Wangensteen KJ, Ekker SC, Wang X, McIvor RS. Dynamic gene expression after systemic delivery of plasmid DNA as determined by in vivo bioluminescence imaging. Human Gene Therapy. 16: 1325-32. PMID 16259566 DOI: 10.1089/Hum.2005.16.1325 |
0.69 |
|
| 2005 |
Kim HJ, Schleiffarth JR, Jessurun J, Sumanas S, Petryk A, Lin S, Ekker SC. Wnt5 signaling in vertebrate pancreas development. Bmc Biology. 3: 23. PMID 16246260 DOI: 10.1186/1741-7007-3-23 |
0.728 |
|
| 2005 |
Ohlfest JR, Demorest ZL, Motooka Y, Vengco I, Oh S, Chen E, Scappaticci FA, Saplis RJ, Ekker SC, Low WC, Freese AB, Largaespada DA. Combinatorial antiangiogenic gene therapy by nonviral gene transfer using the sleeping beauty transposon causes tumor regression and improves survival in mice bearing intracranial human glioblastoma. Molecular Therapy : the Journal of the American Society of Gene Therapy. 12: 778-88. PMID 16150649 DOI: 10.1016/J.Ymthe.2005.07.689 |
0.56 |
|
| 2005 |
Hackett PB, Ekker SC, Largaespada DA, McIvor RS. Sleeping beauty transposon-mediated gene therapy for prolonged expression. Advances in Genetics. 54: 189-232. PMID 16096013 DOI: 10.1016/S0065-2660(05)54009-4 |
0.603 |
|
| 2005 |
Eckfeldt CE, Mendenhall EM, Flynn CM, Wang TF, Pickart MA, Grindle SM, Ekker SC, Verfaillie CM. Functional analysis of human hematopoietic stem cell gene expression using zebrafish. Plos Biology. 3: e254. PMID 16089502 DOI: 10.1371/Journal.Pbio.0030254 |
0.373 |
|
| 2005 |
Chen E, Stringer SE, Rusch MA, Selleck SB, Ekker SC. A unique role for 6-O sulfation modification in zebrafish vascular development. Developmental Biology. 284: 364-76. PMID 16009360 DOI: 10.1016/J.Ydbio.2005.05.032 |
0.61 |
|
| 2005 |
Klee EW, Shim KJ, Pickart MA, Ekker SC, Ellis LB. AMOD: a morpholino oligonucleotide selection tool. Nucleic Acids Research. 33: W506-11. PMID 15980523 DOI: 10.1093/Nar/Gki453 |
0.307 |
|
| 2005 |
Leung AY, Mendenhall EM, Kwan TT, Liang R, Eckfeldt C, Chen E, Hammerschmidt M, Grindley S, Ekker SC, Verfaillie CM. Characterization of expanded intermediate cell mass in zebrafish chordin morphant embryos. Developmental Biology. 277: 235-54. PMID 15572152 DOI: 10.1016/J.Ydbio.2004.09.032 |
0.604 |
|
| 2005 |
Wangensteen KJ, Wilber A, Zeng G, Frandsen JL, McIvor RS, Ekker SC, Wang X. 1068. Luciferase as an In Vivo Reporter for Selective Liver Repopulation in Adult FAH-/- Mice Molecular Therapy. 11. DOI: 10.1016/J.Ymthe.2005.07.615 |
0.669 |
|
| 2004 |
Hermanson S, Davidson AE, Sivasubbu S, Balciunas D, Ekker SC. Sleeping Beauty transposon for efficient gene delivery. Methods in Cell Biology. 77: 349-62. PMID 15602921 DOI: 10.1016/S0091-679X(04)77019-3 |
0.68 |
|
| 2004 |
Ekker SC. Nonconventional antisense in zebrafish for functional genomics applications. Methods in Cell Biology. 77: 121-36. PMID 15602909 DOI: 10.1016/S0091-679X(04)77007-7 |
0.421 |
|
| 2004 |
Chen E, Ekker SC. Zebrafish as a genomics research model. Current Pharmaceutical Biotechnology. 5: 409-13. PMID 15544488 DOI: 10.2174/1389201043376652 |
0.624 |
|
| 2004 |
Pickart MA, Sivasubbu S, Nielsen AL, Shriram S, King RA, Ekker SC. Functional genomics tools for the analysis of zebrafish pigment. Pigment Cell Research / Sponsored by the European Society For Pigment Cell Research and the International Pigment Cell Society. 17: 461-70. PMID 15357832 DOI: 10.1111/J.1600-0749.2004.00189.X |
0.442 |
|
| 2004 |
Balciunas D, Davidson AE, Sivasubbu S, Hermanson SB, Welle Z, Ekker SC. Enhancer trapping in zebrafish using the Sleeping Beauty transposon. Bmc Genomics. 5: 62. PMID 15347431 DOI: 10.1186/1471-2164-5-62 |
0.683 |
|
| 2004 |
Larson JD, Wadman SA, Chen E, Kerley L, Clark KJ, Eide M, Lippert S, Nasevicius A, Ekker SC, Hackett PB, Essner JJ. Expression of VE-cadherin in zebrafish embryos: a new tool to evaluate vascular development. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 231: 204-13. PMID 15305301 DOI: 10.1002/Dvdy.20102 |
0.786 |
|
| 2004 |
Klee EW, Carlson DF, Fahrenkrug SC, Ekker SC, Ellis LB. Identifying secretomes in people, pufferfish and pigs. Nucleic Acids Research. 32: 1414-21. PMID 14990746 DOI: 10.1093/Nar/Gkh286 |
0.635 |
|
| 2004 |
Chen E, Hermanson S, Ekker SC. Syndecan-2 is essential for angiogenic sprouting during zebrafish development. Blood. 103: 1710-9. PMID 14592839 DOI: 10.1182/Blood-2003-06-1783 |
0.6 |
|
| 2004 |
Mendenhall EM, Eckfeldt CE, Ekker SC, Verfaillie CM. The Role of Sprouty Family Members in Hematopiesis in Zebrafish and Mammals. Blood. 104: 137-137. DOI: 10.1182/Blood.V104.11.137.137 |
0.431 |
|
| 2004 |
Eckfeldt CE, Mendenhall EM, Ekker SC, Verfaillie CM. Functional Analysis of the Differential Gene Expression Profile of Human HSC Using a Functional Genomics Screen in the Zebrafish. Blood. 104: 136-136. DOI: 10.1182/Blood.V104.11.136.136 |
0.43 |
|
| 2004 |
Wangensteen KJ, Chen ZJ, Steer CJ, Ekker SC. 154. Small inhibitory RNA expressed from sleeping beauty transposons can reduce alpha1-antitrypsin expression Molecular Therapy. 9. DOI: 10.1016/J.Ymthe.2004.06.077 |
0.679 |
|
| 2003 |
Davidson AE, Balciunas D, Mohn D, Shaffer J, Hermanson S, Sivasubbu S, Cliff MP, Hackett PB, Ekker SC. Efficient gene delivery and gene expression in zebrafish using the Sleeping Beauty transposon. Developmental Biology. 263: 191-202. PMID 14597195 DOI: 10.1016/J.Ydbio.2003.07.013 |
0.761 |
|
| 2002 |
Sumanas S, Kim HJ, Hermanson SB, Ekker SC. Lateral line, nervous system, and maternal expression of Frizzled 7a during zebrafish embryogenesis. Mechanisms of Development. 115: 107-11. PMID 12049772 DOI: 10.1016/S0925-4773(02)00084-9 |
0.734 |
|
| 2002 |
Dupuy AJ, Clark K, Carlson CM, Fritz S, Davidson AE, Markley KM, Finley K, Fletcher CF, Ekker SC, Hackett PB, Horn S, Largaespada DA. Mammalian germ-line transgenesis by transposition. Proceedings of the National Academy of Sciences of the United States of America. 99: 4495-9. PMID 11904379 DOI: 10.1073/Pnas.062630599 |
0.794 |
|
| 2001 |
Nasevicius A, Ekker SC. The zebrafish as a novel system for functional genomics and therapeutic development applications. Current Opinion in Molecular Therapeutics. 3: 224-8. PMID 11497344 |
0.802 |
|
| 2001 |
Bingham S, Nasevicius A, Ekker SC, Chandrasekhar A. Sonic hedgehog and tiggy-winkle hedgehog cooperatively induce zebrafish branchiomotor neurons. Genesis (New York, N.Y. : 2000). 30: 170-4. PMID 11477700 DOI: 10.1002/Gene.1057 |
0.787 |
|
| 2001 |
Klee EW, Ekker SC, Ellis LB. Target selection for Danio rerio functional genomics. Genesis (New York, N.Y. : 2000). 30: 123-5. PMID 11477688 DOI: 10.1002/Gene.1045 |
0.323 |
|
| 2001 |
Sumanas S, Ekker SC. Xenopus frizzled-7 morphant displays defects in dorsoventral patterning and convergent extension movements during gastrulation. Genesis (New York, N.Y. : 2000). 30: 119-22. PMID 11477687 DOI: 10.1002/Gene.1044 |
0.658 |
|
| 2001 |
Sumanas S, Kim HJ, Hermanson S, Ekker SC. Zebrafish frizzled-2 morphant displays defects in body axis elongation. Genesis (New York, N.Y. : 2000). 30: 114-8. PMID 11477686 DOI: 10.1002/Gene.1043 |
0.741 |
|
| 2001 |
Ekker SC, Larson JD. Morphant technology in model developmental systems. Genesis (New York, N.Y. : 2000). 30: 89-93. PMID 11477681 DOI: 10.1002/Gene.1038 |
0.415 |
|
| 2001 |
Finley KR, Davidson AE, Ekker SC. Three-color imaging using fluorescent proteins in living zebrafish embryos. Biotechniques. 31: 66-70, 72. PMID 11464522 DOI: 10.2144/01311St02 |
0.627 |
|
| 2001 |
Sumanas S, Ekker SC. Xenopus frizzled-5: a frizzled family member expressed exclusively in the neural retina of the developing eye. Mechanisms of Development. 103: 133-6. PMID 11335120 DOI: 10.1016/S0925-4773(01)00327-6 |
0.66 |
|
| 2001 |
Ross JJ, Shimmi O, Vilmos P, Petryk A, Kim H, Gaudenz K, Hermanson S, Ekker SC, O'Connor MB, Marsh JL. Twisted gastrulation is a conserved extracellular BMP antagonist. Nature. 410: 479-83. PMID 11260716 DOI: 10.1038/35068578 |
0.552 |
|
| 2000 |
Ekker SC. Morphants: a new systematic vertebrate functional genomics approach. Yeast (Chichester, England). 17: 302-306. PMID 11119307 DOI: 10.1002/1097-0061(200012)17:4<302::Aid-Yea53>3.0.Co;2-# |
0.4 |
|
| 2000 |
Nasevicius A, Larson J, Ekker SC. Distinct requirements for zebrafish angiogenesis revealed by a VEGF-A morphant. Yeast (Chichester, England). 17: 294-301. PMID 11119306 DOI: 10.1002/1097-0061(200012)17:4<294::Aid-Yea54>3.0.Co;2-5 |
0.786 |
|
| 2000 |
Nasevicius A, Ekker SC. Effective targeted gene 'knockdown' in zebrafish. Nature Genetics. 26: 216-20. PMID 11017081 DOI: 10.1038/79951 |
0.828 |
|
| 2000 |
Sumanas S, Strege P, Heasman J, Ekker SC. The putative wnt receptor Xenopus frizzled-7 functions upstream of beta-catenin in vertebrate dorsoventral mesoderm patterning. Development (Cambridge, England). 127: 1981-90. PMID 10751186 |
0.656 |
|
| 2000 |
Nasevicius A, Hyatt TM, Hermanson SB, Ekker SC. Sequence, expression, and location of zebrafish frizzled 10. Mechanisms of Development. 92: 311-4. PMID 10727872 DOI: 10.1016/S0925-4773(00)00244-6 |
0.804 |
|
| 1999 |
Hyatt TM, Ekker SC. Vectors and techniques for ectopic gene expression in zebrafish. Methods in Cell Biology. 59: 117-26. PMID 9891358 DOI: 10.1016/S0091-679X(08)61823-3 |
0.404 |
|
| 1998 |
Nasevicius A, Hyatt T, Kim H, Guttman J, Walsh E, Sumanas S, Wang Y, Ekker SC. Evidence for a frizzled-mediated wnt pathway required for zebrafish dorsal mesoderm formation. Development (Cambridge, England). 125: 4283-92. PMID 9753682 |
0.785 |
|
| 1995 |
Ekker SC, Ungar AR, Greenstein P, von Kessler DP, Porter JA, Moon RT, Beachy PA. Patterning activities of vertebrate hedgehog proteins in the developing eye and brain. Current Biology : Cb. 5: 944-55. PMID 7583153 DOI: 10.1016/S0960-9822(95)00185-0 |
0.365 |
|
| 1994 |
Lee JJ, Ekker SC, von Kessler DP, Porter JA, Sun BI, Beachy PA. Autoproteolysis in hedgehog protein biogenesis. Science (New York, N.Y.). 266: 1528-37. PMID 7985023 DOI: 10.1126/Science.7985023 |
0.319 |
|
| 1992 |
Ekker SC, von Kessler DP, Beachy PA. Differential DNA sequence recognition is a determinant of specificity in homeotic gene action. The Embo Journal. 11: 4059-72. PMID 1356765 DOI: 10.1002/J.1460-2075.1992.Tb05499.X |
0.368 |
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